BLASTX nr result
ID: Cocculus23_contig00030803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00030803
(327 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an... 122 7e-26
ref|XP_007016242.1| DNA-directed RNA polymerases I and III subun... 117 2e-24
ref|XP_004147276.1| PREDICTED: DNA-directed RNA polymerases I an... 115 5e-24
gb|EXB30489.1| hypothetical protein L484_006039 [Morus notabilis] 113 3e-23
ref|XP_006424980.1| hypothetical protein CICLE_v10029631mg [Citr... 113 3e-23
ref|XP_004307018.1| PREDICTED: DNA-directed RNA polymerases I an... 112 4e-23
gb|AFK35687.1| unknown [Medicago truncatula] 110 2e-22
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun... 110 2e-22
ref|XP_003600908.1| DNA-directed RNA polymerases I and III subun... 110 2e-22
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin... 110 3e-22
ref|XP_004145267.1| PREDICTED: DNA-directed RNA polymerases I an... 109 4e-22
gb|EYU28180.1| hypothetical protein MIMGU_mgv1a016747mg [Mimulus... 109 5e-22
ref|XP_007139327.1| hypothetical protein PHAVU_008G020000g [Phas... 107 1e-21
ref|XP_003577696.1| PREDICTED: DNA-directed RNA polymerases I an... 107 2e-21
ref|XP_004303151.1| PREDICTED: DNA-directed RNA polymerases I an... 107 2e-21
ref|XP_007213017.1| hypothetical protein PRUPE_ppa023021mg [Prun... 107 2e-21
ref|XP_004979094.1| PREDICTED: DNA-directed RNA polymerases I an... 106 3e-21
gb|EMS57021.1| DNA-directed RNA polymerases I and III subunit RP... 106 3e-21
ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I an... 106 3e-21
ref|XP_006663894.1| PREDICTED: DNA-directed RNA polymerases I an... 106 4e-21
>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
unnamed protein product [Vitis vinifera]
Length = 105
Score = 122 bits (305), Expect = 7e-26
Identities = 59/70 (84%), Positives = 62/70 (88%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV F GYSIPHPSDARVNIRVQTTGD A EVLKDA QDLM+MCQHVRSTFDKAVVD+KM
Sbjct: 35 PRVAFCGYSIPHPSDARVNIRVQTTGDSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKM 94
Query: 146 SDPVKSMKIK 117
S PVK M I+
Sbjct: 95 SKPVKDMSIE 104
>ref|XP_007016242.1| DNA-directed RNA polymerases I and III subunit RPAC2 isoform 1
[Theobroma cacao] gi|590588607|ref|XP_007016243.1|
DNA-directed RNA polymerases I and III subunit RPAC2
isoform 1 [Theobroma cacao] gi|508786605|gb|EOY33861.1|
DNA-directed RNA polymerases I and III subunit RPAC2
isoform 1 [Theobroma cacao] gi|508786606|gb|EOY33862.1|
DNA-directed RNA polymerases I and III subunit RPAC2
isoform 1 [Theobroma cacao]
Length = 114
Score = 117 bits (292), Expect = 2e-24
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPS+ARVNIRVQTTGDPA EVLKDA QDLM+MC+HVRS FDKAV DFK
Sbjct: 35 PRVTFCGYSIPHPSNARVNIRVQTTGDPAREVLKDACQDLMLMCRHVRSGFDKAVEDFKA 94
Query: 146 SDPVKSMKI 120
S+ VK+MKI
Sbjct: 95 SNAVKAMKI 103
>ref|XP_004147276.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Cucumis sativus]
Length = 104
Score = 115 bits (289), Expect = 5e-24
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPSD RVNIRVQTTGDPA EVLKDA Q+LMV+CQHVR+TFDKAV+D K+
Sbjct: 35 PRVTFCGYSIPHPSDNRVNIRVQTTGDPAREVLKDACQNLMVVCQHVRNTFDKAVLDVKL 94
Query: 146 SDPVKSMKIK 117
++PV+ + IK
Sbjct: 95 TNPVRDINIK 104
>gb|EXB30489.1| hypothetical protein L484_006039 [Morus notabilis]
Length = 97
Score = 113 bits (282), Expect = 3e-23
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTFSGYSIPHPSD +VNIR+QTTGD A++VLKDA QDLM+MCQHVRSTFDKAVVDFKM
Sbjct: 35 PRVTFSGYSIPHPSDNKVNIRIQTTGDLAADVLKDACQDLMLMCQHVRSTFDKAVVDFKM 94
Query: 146 SD 141
S+
Sbjct: 95 SE 96
>ref|XP_006424980.1| hypothetical protein CICLE_v10029631mg [Citrus clementina]
gi|568870492|ref|XP_006488436.1| PREDICTED: DNA-directed
RNA polymerases I and III subunit RPAC2-like [Citrus
sinensis] gi|557526914|gb|ESR38220.1| hypothetical
protein CICLE_v10029631mg [Citrus clementina]
Length = 107
Score = 113 bits (282), Expect = 3e-23
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPSDARVNIRVQTTGDPA EVLKD+ Q+LM+MC+HVRSTF KAV DF+
Sbjct: 35 PRVTFCGYSIPHPSDARVNIRVQTTGDPAREVLKDSCQELMLMCRHVRSTFAKAVDDFRT 94
Query: 146 SDPVKSMKI 120
S+ V++MKI
Sbjct: 95 SEKVQAMKI 103
>ref|XP_004307018.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Fragaria vesca subsp. vesca]
Length = 107
Score = 112 bits (281), Expect = 4e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PR F GYSIPHPSD RVNIR+QTTGDPA +V KDA QDLMVMCQHV +TFDKAVVDFKM
Sbjct: 35 PRTKFCGYSIPHPSDNRVNIRIQTTGDPAKDVFKDACQDLMVMCQHVSNTFDKAVVDFKM 94
Query: 146 SDPVKSMKIK 117
S+ V+ M I+
Sbjct: 95 SNSVEGMDIE 104
>gb|AFK35687.1| unknown [Medicago truncatula]
Length = 115
Score = 110 bits (275), Expect = 2e-22
Identities = 54/70 (77%), Positives = 58/70 (82%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPS+ RVN+RVQTTGDPASEVLKD QDLM+MCQHVRSTF KAV DFK
Sbjct: 35 PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 94
Query: 146 SDPVKSMKIK 117
S V+S K
Sbjct: 95 SKSVRSTSEK 104
>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
polymerases I and III subunit RPAC2 [Medicago
truncatula]
Length = 115
Score = 110 bits (275), Expect = 2e-22
Identities = 54/70 (77%), Positives = 58/70 (82%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPS+ RVN+RVQTTGDPASEVLKD QDLM+MCQHVRSTF KAV DFK
Sbjct: 35 PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 94
Query: 146 SDPVKSMKIK 117
S V+S K
Sbjct: 95 SKSVRSTSEK 104
>ref|XP_003600908.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
truncatula] gi|355489956|gb|AES71159.1| DNA-directed RNA
polymerases I and III subunit RPAC2 [Medicago
truncatula]
Length = 218
Score = 110 bits (275), Expect = 2e-22
Identities = 54/70 (77%), Positives = 58/70 (82%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPS+ RVN+RVQTTGDPASEVLKD QDLM+MCQHVRSTF KAV DFK
Sbjct: 138 PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 197
Query: 146 SDPVKSMKIK 117
S V+S K
Sbjct: 198 SKSVRSTSEK 207
>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
gi|255630968|gb|ACU15848.1| unknown [Glycine max]
Length = 107
Score = 110 bits (274), Expect = 3e-22
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV+F GYSIPHPSD RVNIRVQTTGDP+ EVLKDA QDLM+MCQHVRSTFDKAV DFK+
Sbjct: 35 PRVSFCGYSIPHPSDNRVNIRVQTTGDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKI 94
Query: 146 SDPVKS 129
S K+
Sbjct: 95 SKARKN 100
>ref|XP_004145267.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Cucumis sativus]
gi|449516242|ref|XP_004165156.1| PREDICTED: DNA-directed
RNA polymerases I and III subunit RPAC2-like isoform 1
[Cucumis sativus] gi|449516244|ref|XP_004165157.1|
PREDICTED: DNA-directed RNA polymerases I and III
subunit RPAC2-like isoform 2 [Cucumis sativus]
Length = 108
Score = 109 bits (273), Expect = 4e-22
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPSD RVNIRVQTTGDPA EVLKDA Q+LMV+CQHVR+TFDKAV+DF +
Sbjct: 35 PRVTFCGYSIPHPSDNRVNIRVQTTGDPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNL 94
Query: 146 SDP 138
+ P
Sbjct: 95 TKP 97
>gb|EYU28180.1| hypothetical protein MIMGU_mgv1a016747mg [Mimulus guttatus]
Length = 108
Score = 109 bits (272), Expect = 5e-22
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRVTF GYSIPHPSDARVNIR+QTTGDPA EVLKD+ QD M++CQHVRSTFD+AV++FK
Sbjct: 35 PRVTFCGYSIPHPSDARVNIRIQTTGDPAREVLKDSCQDQMLVCQHVRSTFDQAVMEFKS 94
Query: 146 SDPVKSMK 123
+KS++
Sbjct: 95 KKALKSLE 102
>ref|XP_007139327.1| hypothetical protein PHAVU_008G020000g [Phaseolus vulgaris]
gi|561012460|gb|ESW11321.1| hypothetical protein
PHAVU_008G020000g [Phaseolus vulgaris]
Length = 97
Score = 107 bits (268), Expect = 1e-21
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFK 150
PRV+F GYSIPHPS+ RVNIRVQTTGDPASEVLKDA QDLM+MCQHVR TFDKAV DFK
Sbjct: 35 PRVSFCGYSIPHPSENRVNIRVQTTGDPASEVLKDACQDLMLMCQHVRGTFDKAVSDFK 93
>ref|XP_003577696.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Brachypodium distachyon]
Length = 107
Score = 107 bits (267), Expect = 2e-21
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV F GYSIPHP+D +VNIRVQTTGDPA +V+KDALQDLMVM QHVR+TFDKAV DFK
Sbjct: 35 PRVAFCGYSIPHPADNKVNIRVQTTGDPAKDVMKDALQDLMVMGQHVRATFDKAVADFKS 94
Query: 146 SDPVKSMKI 120
+ P + M +
Sbjct: 95 NIPAEQMDV 103
>ref|XP_004303151.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 107
Score = 107 bits (266), Expect = 2e-21
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PR F GYSIPHPSD VNIR+QTTGDPA +V +DA QDLMVMCQHV +TFDKAVVDFKM
Sbjct: 35 PRTRFCGYSIPHPSDNLVNIRIQTTGDPAKDVFRDACQDLMVMCQHVSNTFDKAVVDFKM 94
Query: 146 SDPVKSMKIK 117
S V M ++
Sbjct: 95 SKSVDGMDVE 104
>ref|XP_007213017.1| hypothetical protein PRUPE_ppa023021mg [Prunus persica]
gi|462408882|gb|EMJ14216.1| hypothetical protein
PRUPE_ppa023021mg [Prunus persica]
Length = 107
Score = 107 bits (266), Expect = 2e-21
Identities = 53/69 (76%), Positives = 55/69 (79%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PR F GYSIPHPSD RVNIRVQTTG A EV KDA QDLMV+CQHVRSTFDKAVVDF+M
Sbjct: 35 PRTKFCGYSIPHPSDNRVNIRVQTTGAAAKEVFKDASQDLMVVCQHVRSTFDKAVVDFRM 94
Query: 146 SDPVKSMKI 120
S V M I
Sbjct: 95 SKSVNGMDI 103
>ref|XP_004979094.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Setaria italica]
Length = 106
Score = 106 bits (265), Expect = 3e-21
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV F GYSIPHP+D +VNIRVQTTGDPA +VLKDALQDLMVMCQHVR TFD AV +
Sbjct: 35 PRVAFCGYSIPHPADKKVNIRVQTTGDPAKDVLKDALQDLMVMCQHVRGTFDNAVASHRA 94
Query: 146 SDPVKSMKI 120
+P + M I
Sbjct: 95 KEPAEQMDI 103
>gb|EMS57021.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Triticum
urartu]
Length = 108
Score = 106 bits (265), Expect = 3e-21
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV F GYSIPHP+D +VNIRVQTTGDPA +V+KDALQDLMVM QHVR TFDKAV DFK
Sbjct: 35 PRVAFCGYSIPHPADNKVNIRVQTTGDPAKDVMKDALQDLMVMGQHVRGTFDKAVADFKS 94
Query: 146 SDPVKSMKI 120
P + M +
Sbjct: 95 KMPAEQMDV 103
>ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Glycine max]
Length = 106
Score = 106 bits (265), Expect = 3e-21
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFK 150
PRVTF GYSIPHPSD RVNIRVQTTGDPA EVLKD QDLM+MCQHVRSTFD A+ DFK
Sbjct: 35 PRVTFCGYSIPHPSDNRVNIRVQTTGDPAREVLKDGCQDLMLMCQHVRSTFDNAMTDFK 93
>ref|XP_006663894.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC2-like [Oryza brachyantha]
Length = 109
Score = 106 bits (264), Expect = 4e-21
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = -2
Query: 326 PRVTFSGYSIPHPSDARVNIRVQTTGDPASEVLKDALQDLMVMCQHVRSTFDKAVVDFKM 147
PRV F GYSIPHP+D ++NIRVQTTGDPA +VLKD+LQDLMVMCQHVR TFD AV DF+
Sbjct: 35 PRVAFCGYSIPHPADNKINIRVQTTGDPAKDVLKDSLQDLMVMCQHVRGTFDTAVTDFRQ 94
Query: 146 SDP 138
++P
Sbjct: 95 NNP 97