BLASTX nr result
ID: Cocculus23_contig00030701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00030701
(202 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [... 100 2e-19
ref|NP_564296.1| RNA helicase family protein [Arabidopsis thalia... 100 2e-19
ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutr... 100 2e-19
ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 100 3e-19
ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Caps... 99 8e-19
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor... 98 1e-18
ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citr... 97 3e-18
ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citr... 97 3e-18
ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citr... 97 3e-18
ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theob... 97 3e-18
ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theob... 97 3e-18
ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theob... 97 3e-18
ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 97 3e-18
emb|CBI27579.3| unnamed protein product [Vitis vinifera] 97 3e-18
emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera] 96 4e-18
ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinu... 94 2e-17
ref|XP_007227317.1| hypothetical protein PRUPE_ppa016499mg, part... 94 2e-17
ref|XP_002314547.1| RNA helicase family protein [Populus trichoc... 94 3e-17
gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus... 93 4e-17
ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 92 6e-17
>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
Length = 708
Score = 100 bits (250), Expect = 2e-19
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETVE+NSVVV+IGETGSGKSTQLSQILHR GYTKSG IA+TQP
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQP 57
>ref|NP_564296.1| RNA helicase family protein [Arabidopsis thaliana]
gi|15451224|gb|AAK96883.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|332192768|gb|AEE30889.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 700
Score = 100 bits (250), Expect = 2e-19
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETVE+NSVVV+IGETGSGKSTQLSQILHR GYTKSG IA+TQP
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQP 57
>ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutrema salsugineum]
gi|557093491|gb|ESQ34073.1| hypothetical protein
EUTSA_v10006961mg [Eutrema salsugineum]
Length = 703
Score = 100 bits (249), Expect = 2e-19
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETVE+N VVV+IGETGSGKSTQLSQILHR+GYTKSG IAVTQP
Sbjct: 1 MANLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQP 57
>ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
gi|449494554|ref|XP_004159579.1| PREDICTED:
ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
Length = 702
Score = 100 bits (248), Expect = 3e-19
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETVEQN VVV+IGETGSGKSTQLSQ+LHR+GYTKSG I VTQP
Sbjct: 1 MAQLPILQFEEKIIETVEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQP 57
>ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Capsella rubella]
gi|482575617|gb|EOA39804.1| hypothetical protein
CARUB_v10008467mg [Capsella rubella]
Length = 699
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETV++N VVVVIGETGSGKSTQLSQILHR GYTKSG IAVTQP
Sbjct: 1 MANLPILQFEEKIVETVDKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQP 57
>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
Length = 704
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQ+EEKI+ETVEQN VVVVIGETGSGKSTQLSQILHR GYTKSG I VTQP
Sbjct: 1 MANLPILQYEEKIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQP 57
>ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540284|gb|ESR51328.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 524
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQ+EEKI+ETV+QN VVVVIGETGSGKSTQLSQILHR GYTKSG I VTQP
Sbjct: 1 MANLPILQYEEKIVETVKQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQP 57
>ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540283|gb|ESR51327.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 550
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQ+EEKI+ETV+QN VVVVIGETGSGKSTQLSQILHR GYTKSG I VTQP
Sbjct: 1 MANLPILQYEEKIVETVKQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQP 57
>ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|567891137|ref|XP_006438089.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540282|gb|ESR51326.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540285|gb|ESR51329.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 704
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQ+EEKI+ETV+QN VVVVIGETGSGKSTQLSQILHR GYTKSG I VTQP
Sbjct: 1 MANLPILQYEEKIVETVKQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQP 57
>ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theobroma cacao]
gi|508708963|gb|EOY00860.1| RNA helicase family protein
isoform 4 [Theobroma cacao]
Length = 650
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPI+QFE+KI+ETVEQN VVV+IGETGSGKSTQLSQ+LHRKGYT SG +AVTQP
Sbjct: 1 MANLPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQP 57
>ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theobroma cacao]
gi|508708962|gb|EOY00859.1| RNA helicase family protein
isoform 3 [Theobroma cacao]
Length = 692
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPI+QFE+KI+ETVEQN VVV+IGETGSGKSTQLSQ+LHRKGYT SG +AVTQP
Sbjct: 1 MANLPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQP 57
>ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|590695923|ref|XP_007045026.1| RNA helicase family
protein isoform 1 [Theobroma cacao]
gi|508708960|gb|EOY00857.1| RNA helicase family protein
isoform 1 [Theobroma cacao] gi|508708961|gb|EOY00858.1|
RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 700
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPI+QFE+KI+ETVEQN VVV+IGETGSGKSTQLSQ+LHRKGYT SG +AVTQP
Sbjct: 1 MANLPIVQFEKKIIETVEQNPVVVIIGETGSGKSTQLSQMLHRKGYTDSGIVAVTQP 57
>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
Length = 700
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI++ VEQNSVVV+IGETGSGKSTQLSQIL+R+GYT SG +AVTQP
Sbjct: 1 MAKLPILQFEEKIIDIVEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQP 57
>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI++ VEQNSVVV+IGETGSGKSTQLSQIL+R+GYT SG +AVTQP
Sbjct: 1 MAKLPILQFEEKIIDIVEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQP 57
>emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]
Length = 2336
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI++ VEQNSVVV+IGETGSGKSTQLSQIL+R+GYT SG +AVTQP
Sbjct: 1 MAKLPILQFEEKIIDIVEQNSVVVIIGETGSGKSTQLSQILYRRGYTDSGNVAVTQP 57
>ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223546009|gb|EEF47512.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 702
Score = 94.4 bits (233), Expect = 2e-17
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPI+QFE+KI++TVE+N VVV+IGETGSGKSTQLSQ+LHR+GYTKSG I +TQP
Sbjct: 1 MANLPIIQFEDKIIKTVEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGITQP 57
>ref|XP_007227317.1| hypothetical protein PRUPE_ppa016499mg, partial [Prunus persica]
gi|462424253|gb|EMJ28516.1| hypothetical protein
PRUPE_ppa016499mg, partial [Prunus persica]
Length = 325
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEE I++ VE+N+VVV+IGETGSGKSTQLSQILHR+GYTKSG + VTQP
Sbjct: 1 MADLPILQFEETIMKAVEENTVVVIIGETGSGKSTQLSQILHRRGYTKSGIVGVTQP 57
>ref|XP_002314547.1| RNA helicase family protein [Populus trichocarpa]
gi|222863587|gb|EEF00718.1| RNA helicase family protein
[Populus trichocarpa]
Length = 699
Score = 93.6 bits (231), Expect = 3e-17
Identities = 44/54 (81%), Positives = 52/54 (96%)
Frame = -2
Query: 162 LPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
LPI+QFE+KI++TVE N+VVV+IGETGSGKSTQLSQ+LHR+GYTKSG IAVTQP
Sbjct: 5 LPIVQFEDKIMKTVEDNAVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIAVTQP 58
>gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus guttatus]
Length = 654
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPIL++EEKI ETVE+N VVV+IGETGSGKSTQLSQIL R+GYTK+G IAVTQP
Sbjct: 1 MAQLPILRYEEKIAETVEKNPVVVIIGETGSGKSTQLSQILRRRGYTKAGCIAVTQP 57
>ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Fragaria vesca
subsp. vesca]
Length = 698
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = -2
Query: 171 MAVLPILQFEEKILETVEQNSVVVVIGETGSGKSTQLSQILHRKGYTKSGTIAVTQP 1
MA LPILQFEEKI+ETV+ + VVV+IGETGSGKSTQLSQ+LHR+GYT SG + VTQP
Sbjct: 1 MAELPILQFEEKIIETVQNSPVVVIIGETGSGKSTQLSQMLHRRGYTNSGIVGVTQP 57