BLASTX nr result

ID: Cocculus23_contig00030639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030639
         (209 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039140.1| Transcription factor IIIC, subunit 5, putati...    59   5e-07
ref|XP_007039139.1| Transcription factor IIIC, subunit 5, putati...    59   5e-07
ref|XP_007039138.1| General transcription factor 3C polypeptide ...    59   5e-07
ref|XP_006350005.1| PREDICTED: general transcription factor 3C p...    59   9e-07
ref|XP_006350004.1| PREDICTED: general transcription factor 3C p...    59   9e-07
emb|CAN60475.1| hypothetical protein VITISV_028415 [Vitis vinifera]    57   2e-06
emb|CBI24753.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...    57   3e-06
ref|XP_007203854.1| hypothetical protein PRUPE_ppa004640mg [Prun...    55   8e-06

>ref|XP_007039140.1| Transcription factor IIIC, subunit 5, putative isoform 3 [Theobroma
           cacao] gi|508776385|gb|EOY23641.1| Transcription factor
           IIIC, subunit 5, putative isoform 3 [Theobroma cacao]
          Length = 579

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKGG MD+DQED+M++LPPLFSPKDMPEN+
Sbjct: 178 EKGGFMDVDQEDVMMILPPLFSPKDMPENI 207


>ref|XP_007039139.1| Transcription factor IIIC, subunit 5, putative isoform 2 [Theobroma
           cacao] gi|508776384|gb|EOY23640.1| Transcription factor
           IIIC, subunit 5, putative isoform 2 [Theobroma cacao]
          Length = 582

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKGG MD+DQED+M++LPPLFSPKDMPEN+
Sbjct: 178 EKGGFMDVDQEDVMMILPPLFSPKDMPENI 207


>ref|XP_007039138.1| General transcription factor 3C polypeptide 5, putative isoform 1
           [Theobroma cacao] gi|508776383|gb|EOY23639.1| General
           transcription factor 3C polypeptide 5, putative isoform
           1 [Theobroma cacao]
          Length = 630

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKGG MD+DQED+M++LPPLFSPKDMPEN+
Sbjct: 178 EKGGFMDVDQEDVMMILPPLFSPKDMPENI 207


>ref|XP_006350005.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X2 [Solanum tuberosum]
          Length = 542

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKGGLMD+DQEDLMILLPPLF+ KDMP+N+
Sbjct: 139 EKGGLMDVDQEDLMILLPPLFASKDMPDNI 168


>ref|XP_006350004.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X1 [Solanum tuberosum]
           gi|565366663|ref|XP_006350006.1| PREDICTED: general
           transcription factor 3C polypeptide 5-like isoform X3
           [Solanum tuberosum]
          Length = 561

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKGGLMD+DQEDLMILLPPLF+ KDMP+N+
Sbjct: 158 EKGGLMDVDQEDLMILLPPLFASKDMPDNI 187


>emb|CAN60475.1| hypothetical protein VITISV_028415 [Vitis vinifera]
          Length = 1110

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -3

Query: 102 YCSTEKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           Y   EKG L+D+DQEDLMILLPPLFSPKD+PE L
Sbjct: 326 YHFNEKGDLVDVDQEDLMILLPPLFSPKDVPEKL 359


>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKG L+D+DQEDLMILLPPLFSPKD+PE L
Sbjct: 158 EKGDLVDVDQEDLMILLPPLFSPKDVPEKL 187


>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 90  EKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           EKG L+D+DQEDLMILLPPLFSPKD+PE L
Sbjct: 159 EKGDLVDVDQEDLMILLPPLFSPKDVPEKL 188


>ref|XP_007203854.1| hypothetical protein PRUPE_ppa004640mg [Prunus persica]
           gi|462399385|gb|EMJ05053.1| hypothetical protein
           PRUPE_ppa004640mg [Prunus persica]
          Length = 498

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  TEKGGLMDIDQEDLMILLPPLFSPKDMPENL 1
           ++KGGLMDIDQED MILLP LF+PKD+P+NL
Sbjct: 161 SDKGGLMDIDQEDAMILLPQLFAPKDVPDNL 191


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