BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030557
         (413 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
ref|XP_007222375.1| hypothetical protein PRUPE_ppa004015mg [Prun...   196   4e-48
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   195   6e-48
ref|XP_007157581.1| hypothetical protein PHAVU_002G081200g [Phas...   188   8e-46
ref|XP_007045928.1| Pentatricopeptide repeat-containing protein ...   188   8e-46
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   187   1e-45
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]     184   1e-44
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   181   7e-44
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
gb|EYU28838.1| hypothetical protein MIMGU_mgv1a003966mg [Mimulus...   177   1e-42
ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containi...   168   6e-40
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi...   168   8e-40
ref|XP_002512113.1| pentatricopeptide repeat-containing protein,...   160   2e-37
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   135   5e-30
ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat...   131   9e-29
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Caps...   127   1e-27
ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  197 bits (502), Expect = 1e-48
 Identities = 92/135 (68%), Positives = 111/135 (82%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           +KLG   DI VGN+LI++YS+ G +  AR  FDEMP  T VSWTVMISG+AK GD+++AR
Sbjct: 132 VKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETAR 191

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
            LFD AP+KD+ +WG+IISGYVQNNCFKEGL MFRLMQ   LE DEAI VS+LCACAHLG
Sbjct: 192 MLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLG 251

Query: 366 AMDIGIWIHRYLGQI 410
           AM+IG+W+HRYL Q+
Sbjct: 252 AMEIGVWVHRYLDQL 266


>ref|XP_007222375.1| hypothetical protein PRUPE_ppa004015mg [Prunus persica]
           gi|462419311|gb|EMJ23574.1| hypothetical protein
           PRUPE_ppa004015mg [Prunus persica]
          Length = 535

 Score =  196 bits (497), Expect = 4e-48
 Identities = 93/136 (68%), Positives = 110/136 (80%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           LKLG +SDI VGNSLI +Y A   M  AR  FDE+P  + VSWTVMISG +K GD+D+AR
Sbjct: 136 LKLGFVSDIFVGNSLIVMYCAFDDMKAARHIFDEIPSLSAVSWTVMISGHSKAGDLDTAR 195

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
             FD APV+D+ +WGA+ISGYVQNNCFKEGL+MFRLMQL  +E DEAIFVSVLCACAHLG
Sbjct: 196 LFFDEAPVRDRGIWGAMISGYVQNNCFKEGLYMFRLMQLTEIEPDEAIFVSVLCACAHLG 255

Query: 366 AMDIGIWIHRYLGQIQ 413
           A+D GIWIH YL +++
Sbjct: 256 ALDTGIWIHSYLNRLR 271


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  195 bits (495), Expect = 6e-48
 Identities = 89/133 (66%), Positives = 112/133 (84%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           KLGL+ DI VGNSL+++YS CG ++ AR  FDEMP  + VSW+VMISG+AK GD+DSAR 
Sbjct: 133 KLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARL 192

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
            FD AP KD+ +WGA+ISGYVQN+CFKEGL++FRL+QL ++  DE+IFVS+L ACAHLGA
Sbjct: 193 FFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGA 252

Query: 369 MDIGIWIHRYLGQ 407
           +DIGIWIHRYL +
Sbjct: 253 LDIGIWIHRYLNR 265


>ref|XP_007157581.1| hypothetical protein PHAVU_002G081200g [Phaseolus vulgaris]
           gi|561030996|gb|ESW29575.1| hypothetical protein
           PHAVU_002G081200g [Phaseolus vulgaris]
          Length = 517

 Score =  188 bits (477), Expect = 8e-46
 Identities = 87/133 (65%), Positives = 109/133 (81%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           K GL+ DI VGNSL+++YS CG +V AR  FDE+P  + VSW+VMISG+AK GD+DSAR 
Sbjct: 133 KAGLVYDIFVGNSLMAMYSVCGDVVAARYVFDEIPRLSAVSWSVMISGYAKVGDVDSARL 192

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
            FD AP KD+ +WGA+ISGYVQN+CFKEGL++FRL+QL  +  DE+I VS+L ACAHLGA
Sbjct: 193 FFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTEVVPDESICVSILSACAHLGA 252

Query: 369 MDIGIWIHRYLGQ 407
           +DIGIWIHRYL +
Sbjct: 253 LDIGIWIHRYLNR 265


>ref|XP_007045928.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
           gi|508709863|gb|EOY01760.1| Pentatricopeptide
           repeat-containing protein [Theobroma cacao]
          Length = 523

 Score =  188 bits (477), Expect = 8e-46
 Identities = 89/134 (66%), Positives = 109/134 (81%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           LKLG + DI VGN+LI+++ A   +  AR  FDE+P    VSWTVMISG+ K GDID+AR
Sbjct: 132 LKLGFVFDIFVGNALIAMFCAFDNVKVARYIFDEIPWPDFVSWTVMISGYGKIGDIDTAR 191

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
            LFD A VKD  +WGA+ISGYV+NNCFKEGL+MFRLMQ+ ++E DEAI+VSVLCACAHLG
Sbjct: 192 LLFDEASVKDAGIWGAMISGYVKNNCFKEGLYMFRLMQMSDIEPDEAIYVSVLCACAHLG 251

Query: 366 AMDIGIWIHRYLGQ 407
           A+D GIWIH+YLG+
Sbjct: 252 ALDTGIWIHKYLGK 265


>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cicer arietinum]
          Length = 523

 Score =  187 bits (476), Expect = 1e-45
 Identities = 87/133 (65%), Positives = 110/133 (82%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           KLGL+ DI VGNSL+S+Y   G +V AR  FDE+P  ++VSW+VMISG+AK G++DSAR 
Sbjct: 135 KLGLVFDIFVGNSLMSMYVVFGDVVAARYVFDEIPCLSLVSWSVMISGYAKMGNVDSARL 194

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
            FD AP KDK +WGA+ISGYVQN+CFKE L++FRLMQL ++  DE+IFVS+L ACAHLGA
Sbjct: 195 FFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGA 254

Query: 369 MDIGIWIHRYLGQ 407
           +DIG+WIHRYL +
Sbjct: 255 LDIGVWIHRYLNR 267


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  187 bits (475), Expect = 1e-45
 Identities = 86/135 (63%), Positives = 112/135 (82%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           KLGL+ DI+VGNSL+++Y   G +V AR  FDE+P   VVSW+VMISG+AK GD+DSAR 
Sbjct: 135 KLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARL 194

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
            FD AP KDK +WGA+ISGYVQN+CFKE L++FRLMQL ++  DE+IFVS+L ACAHLGA
Sbjct: 195 FFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGA 254

Query: 369 MDIGIWIHRYLGQIQ 413
           ++IG+WIH++L Q++
Sbjct: 255 LEIGVWIHQHLNQLK 269


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score =  184 bits (466), Expect = 1e-44
 Identities = 85/135 (62%), Positives = 104/135 (77%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           LK GL  D+ VGNSLI +YS    M  AR+ FDEMP  + VSW VMISG+ K G++D  R
Sbjct: 116 LKSGLAFDLFVGNSLIVMYSEFRNMEAARQVFDEMPSLSTVSWMVMISGYGKVGEVDKER 175

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
             FD APV+D+ +WGA+ISGYVQN CFKEGL++FRLMQ   +E DEAIFVSVLC CAHLG
Sbjct: 176 LFFDLAPVRDRGIWGAMISGYVQNACFKEGLYLFRLMQCAEIEPDEAIFVSVLCGCAHLG 235

Query: 366 AMDIGIWIHRYLGQI 410
           A+D+G+WIHRYL ++
Sbjct: 236 ALDVGVWIHRYLDRL 250



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           +LGL   + +G  L+ +Y+ CG +  AR  F++MP +  V W  MIS  A  GD D+A  
Sbjct: 249 RLGLPLSVRLGTGLVDMYAKCGNLDLARMVFEKMPQKDTVCWNAMISAMAMHGDGDTAFE 308

Query: 189 LF----DAAPVKDKRVWGAIISGYVQNNCFKEGLHMF----RLMQLE 305
           LF    +A    D   + AI++    +    EG+ M     R+ Q+E
Sbjct: 309 LFEEMEEAGVRPDDITFIAILTACSYSGRAYEGMRMLDRMCRVYQIE 355


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  181 bits (460), Expect = 7e-44
 Identities = 86/135 (63%), Positives = 105/135 (77%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           +KLG   +  VGNSL+ +Y +   M  AR+ FDEMP  + VSWTVMI G+A  GD+D+AR
Sbjct: 132 IKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTAR 191

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
            LFD A VKD  +WGA+ISGYVQNNCFKEGLHMFRLMQL  +E DEAI V++L ACAH+G
Sbjct: 192 ELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMG 251

Query: 366 AMDIGIWIHRYLGQI 410
           A+D GIWIHRYLG++
Sbjct: 252 ALDTGIWIHRYLGRL 266


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  181 bits (460), Expect = 7e-44
 Identities = 86/135 (63%), Positives = 105/135 (77%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           +KLG   +  VGNSL+ +Y +   M  AR+ FDEMP  + VSWTVMI G+A  GD+D+AR
Sbjct: 132 IKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTAR 191

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
            LFD A VKD  +WGA+ISGYVQNNCFKEGLHMFRLMQL  +E DEAI V++L ACAH+G
Sbjct: 192 ELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMG 251

Query: 366 AMDIGIWIHRYLGQI 410
           A+D GIWIHRYLG++
Sbjct: 252 ALDTGIWIHRYLGRL 266



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/94 (34%), Positives = 53/94 (56%)
 Frame = +3

Query: 108 MPLRTVVSWTVMISGFAKQGDIDSARFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMF 287
           +PL   VS T +I  +AK G +D A++LF+    +D   W A+ISG   +   +  + +F
Sbjct: 268 LPLTLRVS-TGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLF 326

Query: 288 RLMQLENLELDEAIFVSVLCACAHLGAMDIGIWI 389
             M+   ++ D   F++VL AC++ G +D GI I
Sbjct: 327 MEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360


>gb|EYU28838.1| hypothetical protein MIMGU_mgv1a003966mg [Mimulus guttatus]
          Length = 552

 Score =  177 bits (450), Expect = 1e-42
 Identities = 86/134 (64%), Positives = 107/134 (79%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           KLG LSD  VGNSLI +YS  G M  AR  FDE+    VVSWTV+ISG+AK+GD+ SAR 
Sbjct: 132 KLGFLSDNFVGNSLIVMYSDFGEMGAARIAFDEIYCHCVVSWTVLISGYAKKGDVYSARS 191

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
           +FD A +KD+ +WGA+ISGYVQN+CFKEGL +FRLMQL  ++ DEA FVSVLCACAHLG+
Sbjct: 192 VFDEARLKDRGIWGAMISGYVQNSCFKEGLKLFRLMQLSGIKPDEANFVSVLCACAHLGS 251

Query: 369 MDIGIWIHRYLGQI 410
           ++IG WIH Y+G++
Sbjct: 252 LEIGKWIHIYVGKV 265



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           K+G+   + +G +LI +YS CG +  A + FD++P R V+ W  MISG+A  GD +SA  
Sbjct: 264 KVGMRVSVKLGTALIDMYSKCGCLDLAEQVFDKLPHRDVICWNTMISGYAMNGDGESALR 323

Query: 189 LFDAAPV----KDKRVWGAIISGYVQNNCFKEGLHMFRLM 296
           LFD         D   + ++ S    +   KEGL + R M
Sbjct: 324 LFDKMEKLGVRPDNVTFVSLFSACSYSGMAKEGLRLLRTM 363


>ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 586

 Score =  168 bits (426), Expect = 6e-40
 Identities = 81/137 (59%), Positives = 99/137 (72%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           ILKLG L D  VGNSLI  Y+    +  AR  F E+P   VVSWTV+I G+AK+GD+  A
Sbjct: 133 ILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIPCNCVVSWTVLICGYAKRGDVYEA 192

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
           R +FD   VKD+ VWG +IS YVQNNCFKEGL +FR MQ+  +E DEAI VSVL ACAHL
Sbjct: 193 RLVFDECLVKDRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAILVSVLSACAHL 252

Query: 363 GAMDIGIWIHRYLGQIQ 413
           G  DIG+WIHRY+ +++
Sbjct: 253 GCADIGVWIHRYVKKLK 269



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/127 (29%), Positives = 57/127 (44%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           + KL + S I +G +LI +Y  CG +  A K FDEMP+R ++ W  MISGFA  G+    
Sbjct: 265 VKKLKMGSSIKLGTALIDMYGKCGCLDIAEKVFDEMPIRDLICWNAMISGFAVNGN---- 320

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
                                        + L +F  MQ   +  D+  F+S+  AC++ 
Sbjct: 321 ---------------------------GLKALKLFNEMQKFRIRPDDVTFLSMFTACSYA 353

Query: 363 GAMDIGI 383
           G  + G+
Sbjct: 354 GMANEGL 360


>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 530

 Score =  168 bits (425), Expect = 8e-40
 Identities = 81/137 (59%), Positives = 99/137 (72%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           ILKLG L D  VGNSLI  Y+    +  AR  F E+P   VVSWTV+I G+AK GD+  A
Sbjct: 133 ILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIPCNCVVSWTVLICGYAKTGDVYEA 192

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
           R +FD   VKD+ VWG +IS YVQNNCFKEGL +FR MQ+  +E DEAI VSVL ACAHL
Sbjct: 193 RLIFDECLVKDRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAILVSVLSACAHL 252

Query: 363 GAMDIGIWIHRYLGQIQ 413
           G +DIGIWIH+Y+ +++
Sbjct: 253 GCVDIGIWIHKYVKKLK 269



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/127 (29%), Positives = 57/127 (44%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           + KL + S I +G +LI +Y+ CG +  A K FDEMP+R ++ W  MISGFA  G+    
Sbjct: 265 VKKLKMGSSIKLGTALIDMYAKCGCLDIAEKVFDEMPIRDLICWNAMISGFAVNGN---- 320

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
                                        + L +F  MQ      D+  F+S+  AC++ 
Sbjct: 321 ---------------------------GLKALKLFNEMQKSRTRPDDVTFISMFTACSYA 353

Query: 363 GAMDIGI 383
           G  + G+
Sbjct: 354 GMANEGL 360


>ref|XP_002512113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549293|gb|EEF50782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 336

 Score =  160 bits (404), Expect = 2e-37
 Identities = 80/136 (58%), Positives = 99/136 (72%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           +L  G   +  VGNSLI +Y     M  AR  FDE+P   VVSWT+MISGFAK GDI+SA
Sbjct: 83  LLLKGFSVNAVVGNSLILMYCGFCNMRAARYVFDEIPGPCVVSWTLMISGFAKVGDIESA 142

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
           R  FD AP KD+ + GA+ISGYVQNNCFKE L+MF ++QL +   DE IF+S+LCACA L
Sbjct: 143 RLFFDGAPRKDRGICGAMISGYVQNNCFKECLYMFSMIQLTDNVPDEGIFLSILCACAQL 202

Query: 363 GAMDIGIWIHRYLGQI 410
           GA+D GIWIHRY+ ++
Sbjct: 203 GALDTGIWIHRYMDRL 218



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/119 (29%), Positives = 53/119 (44%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           +LGL   I +   LI +Y+ CG +  A+  FDEMP R  V W VMISG A  GD + A  
Sbjct: 217 RLGLPLTIRLSTGLIDMYAKCGNVDLAKSLFDEMPQRDTVCWNVMISGLAMHGDGEGA-- 274

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
                                        +++F  M+    + D+  F+++L AC++ G
Sbjct: 275 -----------------------------INLFLKMEEAGFKPDDVTFIAILSACSYSG 304


>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  135 bits (341), Expect = 5e-30
 Identities = 63/129 (48%), Positives = 89/129 (68%)
 Frame = +3

Query: 15  GLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARFLF 194
           GL+SDIHV  +LI +YS+CG + EAR+ FD +  R V  W  M++G+AK GD+D+AR LF
Sbjct: 169 GLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLF 228

Query: 195 DAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGAMD 374
           +  P ++   W A+I+GY Q +   E + MFR MQLE +E DE   ++ L ACAHLGA++
Sbjct: 229 ERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALE 288

Query: 375 IGIWIHRYL 401
           +G WIH Y+
Sbjct: 289 LGEWIHNYI 297



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/132 (24%), Positives = 60/132 (45%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           K GL   + + N+LI +Y+ CG + +A + F  M  ++V++                   
Sbjct: 299 KHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVIT------------------- 339

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
                       W ++I G   +   +E L MF  M+   ++ +E  FV++L AC H+G 
Sbjct: 340 ------------WTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGL 387

Query: 369 MDIGIWIHRYLG 404
           +++G W  + +G
Sbjct: 388 VEMGRWYFKCMG 399


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  135 bits (341), Expect = 5e-30
 Identities = 63/129 (48%), Positives = 89/129 (68%)
 Frame = +3

Query: 15  GLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARFLF 194
           GL+SDIHV  +LI +YS+CG + EAR+ FD +  R V  W  M++G+AK GD+D+AR LF
Sbjct: 169 GLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLF 228

Query: 195 DAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGAMD 374
           +  P ++   W A+I+GY Q +   E + MFR MQLE +E DE   ++ L ACAHLGA++
Sbjct: 229 ERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALE 288

Query: 375 IGIWIHRYL 401
           +G WIH Y+
Sbjct: 289 LGEWIHNYI 297



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/132 (24%), Positives = 60/132 (45%)
 Frame = +3

Query: 9   KLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARF 188
           K GL   + + N+LI +Y+ CG + +A + F  M  ++V++                   
Sbjct: 299 KHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVIT------------------- 339

Query: 189 LFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGA 368
                       W ++I G   +   +E L MF  M+   ++ +E  FV++L AC H+G 
Sbjct: 340 ------------WTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGL 387

Query: 369 MDIGIWIHRYLG 404
           +++G W  + +G
Sbjct: 388 VEMGRWYFKCMG 399


>ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Setaria italica]
          Length = 667

 Score =  131 bits (330), Expect = 9e-29
 Identities = 62/135 (45%), Positives = 88/135 (65%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           +L+ G+L D+ V N+L+ +Y+ C  M  AR+ FD M +R VVSWT ++SG A+ G +D A
Sbjct: 189 VLESGVLPDLKVENALVDMYAECAEMDSARRLFDGMQVRNVVSWTSLVSGLARLGQVDHA 248

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
           R LFD+ P +D   W A+I GYVQ   F+E L MFR MQ  N+  DE   VSV+ AC  L
Sbjct: 249 RELFDSMPERDTVSWTAMIDGYVQAARFREALEMFREMQYSNVRADEFTMVSVITACTKL 308

Query: 363 GAMDIGIWIHRYLGQ 407
           GA+++G W+  Y+ +
Sbjct: 309 GALEMGEWVRVYMSR 323


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  129 bits (324), Expect = 4e-28
 Identities = 62/134 (46%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           I + G+  D+ + N+++ +Y+ CG++ +A+K FDEMP R V SWT+M+ G+AK GD D+A
Sbjct: 253 IERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAA 312

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENL-ELDEAIFVSVLCACAH 359
           R +F+A PVK+   W  +IS Y QN   KE L +F  +QL  + + DE   VS L ACA 
Sbjct: 313 RLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQ 372

Query: 360 LGAMDIGIWIHRYL 401
           LGA+D+G WIH Y+
Sbjct: 373 LGAIDLGGWIHVYI 386



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/132 (27%), Positives = 55/132 (41%)
 Frame = +3

Query: 6   LKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSAR 185
           +KL    D+++ NSL+  Y ACG                               D+  A 
Sbjct: 153 IKLSFGMDLYILNSLVRFYGACG-------------------------------DLSMAE 181

Query: 186 FLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLG 365
            LF     KD   W ++IS + Q NC ++ L +F  M+ EN+  +    V VL ACA   
Sbjct: 182 RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKL 241

Query: 366 AMDIGIWIHRYL 401
            ++ G W+  Y+
Sbjct: 242 DLEFGRWVCSYI 253


>ref|XP_006289319.1| hypothetical protein CARUB_v10002804mg [Capsella rubella]
           gi|482558025|gb|EOA22217.1| hypothetical protein
           CARUB_v10002804mg [Capsella rubella]
          Length = 622

 Score =  127 bits (320), Expect = 1e-27
 Identities = 54/133 (40%), Positives = 90/133 (67%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           I++ G  +D++V NSL+ +Y+ CG +  A + F +MP R VVSWT M++G+ K G I+ A
Sbjct: 143 IVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMIEDA 202

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHL 362
           R +FD  P ++   W  +I+GY +NNCF++ + +F L++ E +  +E + VSV+ +CAHL
Sbjct: 203 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELLKREGVVANETVMVSVISSCAHL 262

Query: 363 GAMDIGIWIHRYL 401
           GA++ G+  H Y+
Sbjct: 263 GALEHGVRAHEYV 275


>ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Citrus sinensis]
          Length = 663

 Score =  127 bits (319), Expect = 2e-27
 Identities = 58/124 (46%), Positives = 86/124 (69%)
 Frame = +3

Query: 36  VGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSARFLFDAAPVKD 215
           +GN+L+ +Y  CG + EAR+ FDEMP + V+ WT M+SG+   G ++ AR LFD +PV+D
Sbjct: 270 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 329

Query: 216 KRVWGAIISGYVQNNCFKEGLHMFRLMQLENLELDEAIFVSVLCACAHLGAMDIGIWIHR 395
             +W A+I+GYVQ N F E + +FR MQ+  L+ D+ I V++L  CA LGA++ G WIH 
Sbjct: 330 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 389

Query: 396 YLGQ 407
           Y+ +
Sbjct: 390 YINE 393



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   ILKLGLLSDIHVGNSLISLYSACGTMVEARKTFDEMPLRTVVSWTVMISGFAKQGDIDSA 182
           ++K GL  D +V NS++ +Y   G +   +K FDEM                        
Sbjct: 158 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------ 193

Query: 183 RFLFDAAPVKDKRVWGAIISGYVQNNCFKEGLHMFRLMQLE-NLELDEAIFVSVLCACAH 359
                  P KD   W   ISG+V+   F++ + +FR M+   NL  DE   VS L AC  
Sbjct: 194 -------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 246

Query: 360 LGAMDIGIWIHRYLGQ 407
           L  +++G  IHRY+ Q
Sbjct: 247 LKNLELGKEIHRYINQ 262