BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030384
         (366 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17834.3| unnamed protein product [Vitis vinifera]              116   3e-24
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...   116   3e-24
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]   114   2e-23
ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog ...   106   4e-21
ref|XP_007014206.1| X-ray repair cross complementing 3 (XRCC3) i...   105   5e-21
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...   105   5e-21
gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus nota...   105   7e-21
gb|EYU42410.1| hypothetical protein MIMGU_mgv1a011330mg [Mimulus...   104   1e-20
ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ...   103   2e-20
ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [A...   103   3e-20
ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog ...   100   3e-19
ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citr...   100   3e-19
ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Popu...    99   6e-19
ref|XP_006401203.1| hypothetical protein EUTSA_v10015458mg [Eutr...    92   7e-17
ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, part...    90   3e-16
ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog ...    89   5e-16
gb|EAY86307.1| hypothetical protein OsI_07680 [Oryza sativa Indi...    89   5e-16
ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [S...    89   6e-16
ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog ...    89   8e-16
ref|NP_001047150.1| Os02g0562100 [Oryza sativa Japonica Group] g...    89   8e-16

>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGR-NCEGDLGEGEYRVR-T 169
           +RVGNLG +WSSGRRV AALG++WA+CVNSRLFLSR +E+VG     G +G G+   R T
Sbjct: 170 LRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLT 229

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           RR +HV+FAPHLPESSCEF I R+GV GV
Sbjct: 230 RRHLHVIFAPHLPESSCEFVISREGVLGV 258


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGR-NCEGDLGEGEYRVR-T 169
           +RVGNLG +WSSGRRV AALG++WA+CVNSRLFLSR +E+VG     G +G G+   R T
Sbjct: 210 LRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVGAGDTVSRLT 269

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           RR +HV+FAPHLPESSCEF I R+GV GV
Sbjct: 270 RRHLHVIFAPHLPESSCEFVISREGVLGV 298


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score =  114 bits (284), Expect = 2e-23
 Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = -1

Query: 342  VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGR-NCEGDLGEGEYRVR-T 169
            +RVGNLG +WSSGRRV AALG++WA+CVNSRLFLSR +E+V      G +G G+   R T
Sbjct: 1987 LRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSRNEEIVXEVTGLGGVGAGDTVSRLT 2046

Query: 168  RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
            RR +HV+FAPHLPESSCEF I R+GV GV
Sbjct: 2047 RRHLHVIFAPHLPESSCEFVISREGVLGV 2075


>ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog [Fragaria vesca subsp.
           vesca]
          Length = 284

 Score =  106 bits (264), Expect = 4e-21
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRR 163
           VRVGNL  ++SSGRRV  ALG+AW++CVNSRLFLSR +E+VGR        GE    T+R
Sbjct: 202 VRVGNLRSLYSSGRRVCPALGLAWSNCVNSRLFLSRNEEIVGRE------NGEMSRHTKR 255

Query: 162 RIHVVFAPHLPESSCEFEILRDGVFGV 82
           R+ VVFAPHLP SSCEF I   GVFGV
Sbjct: 256 RLDVVFAPHLPPSSCEFVITEYGVFGV 282


>ref|XP_007014206.1| X-ray repair cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|590580934|ref|XP_007014207.1| X-ray repair
           cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|590580938|ref|XP_007014208.1| X-ray repair
           cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|590580942|ref|XP_007014209.1| X-ray repair
           cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|590580946|ref|XP_007014210.1| X-ray repair
           cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|508784569|gb|EOY31825.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784570|gb|EOY31826.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784571|gb|EOY31827.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784572|gb|EOY31828.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784573|gb|EOY31829.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
          Length = 299

 Score =  105 bits (263), Expect = 5e-21
 Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGE--GEYRVRT 169
           +R+GNLG +++SGRRV  ALG+AWA+CVNSRLFLSR++EV        +GE  G    +T
Sbjct: 206 LRIGNLGCLYTSGRRVCPALGLAWANCVNSRLFLSRHEEVNREENGKLIGESGGFVCKQT 265

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           RR+++VVFAPHLPESSCEF I R+G+FGV
Sbjct: 266 RRKLYVVFAPHLPESSCEFVITREGLFGV 294


>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/88 (60%), Positives = 66/88 (75%)
 Frame = -1

Query: 339 RVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRRR 160
           R+G+LG ++SSGRRV  ALG+AWA+CVNSRLFLSR +  +    E     G +  +TRRR
Sbjct: 218 RIGDLGSLYSSGRRVCPALGLAWANCVNSRLFLSRDENGMVDGAES----GSFCSQTRRR 273

Query: 159 IHVVFAPHLPESSCEFEILRDGVFGVSS 76
           +HVVFAPHLP SSCEF I R+GVFG+ S
Sbjct: 274 LHVVFAPHLPYSSCEFVIRREGVFGIDS 301


>gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus notabilis]
          Length = 299

 Score =  105 bits (262), Expect = 7e-21
 Identities = 56/89 (62%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVV-GRNCEGDLGEGE-YRVRT 169
           +R+GNL  ++SS RRV  ALG+AWA+CVNSRLFLSR +EV+   N   + G G+  R +T
Sbjct: 209 LRIGNLKYLYSSERRVCPALGLAWANCVNSRLFLSRNEEVIREENGSANAGNGDTLRRQT 268

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           RRRIHV+FAPHLPESS EF I R+GVFGV
Sbjct: 269 RRRIHVLFAPHLPESSTEFVIRREGVFGV 297


>gb|EYU42410.1| hypothetical protein MIMGU_mgv1a011330mg [Mimulus guttatus]
          Length = 285

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/92 (58%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
 Frame = -1

Query: 348 ESVRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVG---RNCEGDLGEGEYR 178
           ES+R+GN    +SSGRRV AALG++WA+CVN+RLF+ R DE +G       G+ GE    
Sbjct: 194 ESLRIGNSVSFFSSGRRVSAALGLSWANCVNTRLFMWREDERIGSSENEIVGEEGETLEN 253

Query: 177 VRTRRRIHVVFAPHLPESSCEFEILRDGVFGV 82
            +TRR I VVFAPHLP+SSCEF I R+GVFGV
Sbjct: 254 FQTRRFIRVVFAPHLPDSSCEFVIRREGVFGV 285


>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
           gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
           protein XRCC3 homolog [Cucumis sativus]
          Length = 294

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -1

Query: 345 SVRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGE--YRVR 172
           ++R+GNL  + SS RRV  ALG+AWA+CVNSRLFLSR +EVVG   EG +   E   R R
Sbjct: 203 ALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEG-EGMMNGSELVQRRR 261

Query: 171 TRRRIHVVFAPHLPESSCEFEILRDGVFGVSS 76
           TRR +HVVFAPHLP+SSCE+ I R+GV GV S
Sbjct: 262 TRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293


>ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [Amborella trichopoda]
           gi|548848204|gb|ERN07307.1| hypothetical protein
           AMTR_s00019p00219950 [Amborella trichopoda]
          Length = 315

 Score =  103 bits (256), Expect = 3e-20
 Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 13/100 (13%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVV------GRNCEG------- 202
           V+VGN   ++SSGR+V  ALG++WA+CVNSR+FLSR +E V      G N +        
Sbjct: 214 VQVGNYSCLFSSGRKVCPALGLSWANCVNSRVFLSRDEEKVADNKMWGSNSQALSENGGF 273

Query: 201 DLGEGEYRVRTRRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           + G G++R RTRR++ VVFAPHLP+ SCEFEI RDGVFGV
Sbjct: 274 EDGYGDFRTRTRRKMQVVFAPHLPKFSCEFEIRRDGVFGV 313


>ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog [Citrus sinensis]
          Length = 302

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCE------GDLGEGEY 181
           +RVGNLG ++SSGR +  ALG+AWA+CVNSRLFLSR ++ V R  +      G  G  ++
Sbjct: 207 LRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDF 266

Query: 180 RV-RTRRRIHVVFAPHLPESSCEFEILRDGVFG 85
              RTRR +HVVFAPHL ++SCEFEI R+GVFG
Sbjct: 267 VCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299


>ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citrus clementina]
           gi|557556604|gb|ESR66618.1| hypothetical protein
           CICLE_v10008928mg [Citrus clementina]
          Length = 321

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCE------GDLGEGEY 181
           +RVGNLG ++SSGR +  ALG+AWA+CVNSRLFLSR ++ V R  +      G  G  ++
Sbjct: 226 LRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDF 285

Query: 180 RV-RTRRRIHVVFAPHLPESSCEFEILRDGVFG 85
              RTRR +HVVFAPHL ++SCEFEI R+GVFG
Sbjct: 286 VCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 318


>ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Populus trichocarpa]
           gi|222865909|gb|EEF03040.1| hypothetical protein
           POPTR_0018s10090g [Populus trichocarpa]
          Length = 290

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 52/88 (59%), Positives = 64/88 (72%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRR 163
           VR+GNL  M+SSGRRV  ALG++WA+CVNSRLFLS+ +   G    G+   G     TRR
Sbjct: 204 VRIGNLSGMYSSGRRVCPALGLSWANCVNSRLFLSKDEYESGLVGGGE--SGFLSRETRR 261

Query: 162 RIHVVFAPHLPESSCEFEILRDGVFGVS 79
           R+HVVFAPHLP+ SCEF I R+GV GV+
Sbjct: 262 RLHVVFAPHLPDLSCEFVIRREGVVGVN 289


>ref|XP_006401203.1| hypothetical protein EUTSA_v10015458mg [Eutrema salsugineum]
           gi|557102293|gb|ESQ42656.1| hypothetical protein
           EUTSA_v10015458mg [Eutrema salsugineum]
          Length = 296

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 42/84 (50%), Positives = 61/84 (72%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRR 163
           +R+GNL  ++SSGRRV  ALG+AWA+CVNSR F+SR +E + +    + G     +R +R
Sbjct: 209 LRIGNLRYLYSSGRRVVPALGLAWANCVNSRFFISRSNETICKE-NDESGRSSVSIRAQR 267

Query: 162 RIHVVFAPHLPESSCEFEILRDGV 91
           R+ +VF+PHLP SSCEF+I  +G+
Sbjct: 268 RLEIVFSPHLPGSSCEFKITPEGI 291


>ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, partial [Capsella rubella]
           gi|482548370|gb|EOA12564.1| hypothetical protein
           CARUB_v10026831mg, partial [Capsella rubella]
          Length = 308

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVV--GRNCEGDLGEGEYRVRT 169
           +R+GNL  + SSGRRV  ALG+AWA+CVNSR F+SR D+ +   R+   + G      R 
Sbjct: 218 LRIGNLRYLCSSGRRVVPALGLAWANCVNSRFFISRGDDTICKERSENDESGSSSVSRRA 277

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGVSS 76
           +RR+ +VF+P+LP +SCEF I R+G+ GV +
Sbjct: 278 QRRLDIVFSPYLPATSCEFMITREGICGVQA 308


>ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog [Solanum lycopersicum]
          Length = 285

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 348 ESVRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRT 169
           + +R+GN    ++S R+V AALG++WA+CVN+RLFLSR +E V R   GD     +  +T
Sbjct: 198 DGLRIGNSTCWYTSERKVCAALGLSWANCVNTRLFLSRQEERVAREVNGD---DCFSTQT 254

Query: 168 RRRIHVVFAPHLPESSCEFEILRDGVFGV 82
           RR I V FAPHLP+S CEF I R+ +FG+
Sbjct: 255 RRFIRVAFAPHLPDSYCEFVISREKIFGL 283


>gb|EAY86307.1| hypothetical protein OsI_07680 [Oryza sativa Indica Group]
          Length = 290

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 54/78 (69%)
 Frame = -1

Query: 315 WSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRRRIHVVFAPH 136
           WSSGRRV  ALG+AWA+CVN+RLFL+R  +  GR C             RRR++V FAPH
Sbjct: 222 WSSGRRVSPALGIAWANCVNTRLFLTR--DADGRGC------------ARRRMNVAFAPH 267

Query: 135 LPESSCEFEILRDGVFGV 82
           LPE +CEF I RDGVFGV
Sbjct: 268 LPERACEFVIRRDGVFGV 285


>ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [Sorghum bicolor]
           gi|241933847|gb|EES06992.1| hypothetical protein
           SORBIDRAFT_04g023090 [Sorghum bicolor]
          Length = 292

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/78 (61%), Positives = 52/78 (66%)
 Frame = -1

Query: 315 WSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRRRIHVVFAPH 136
           WSSGRRV  ALG+AWA+CVN RLFL+R  EV G    G           RRR+ V FAPH
Sbjct: 221 WSSGRRVSPALGIAWANCVNMRLFLTR--EVGGDGASGS---------ARRRMKVAFAPH 269

Query: 135 LPESSCEFEILRDGVFGV 82
           LPE SCEF I RDGVFGV
Sbjct: 270 LPERSCEFMIRRDGVFGV 287


>ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog [Cicer arietinum]
          Length = 296

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 47/87 (54%), Positives = 57/87 (65%)
 Frame = -1

Query: 342 VRVGNLGEMWSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRR 163
           +R+GN  E++SSGRRV  ALG++WA+CVNSR FLS  DE           EG  RV   R
Sbjct: 212 MRIGNFSELYSSGRRVCPALGLSWANCVNSRFFLSMDDE---------YEEGGGRVTKMR 262

Query: 162 RIHVVFAPHLPESSCEFEILRDGVFGV 82
           R+ VVFAPHLP+ S  F I  +GVFGV
Sbjct: 263 RLSVVFAPHLPQCSSRFVITTEGVFGV 289


>ref|NP_001047150.1| Os02g0562100 [Oryza sativa Japonica Group]
           gi|46391018|dbj|BAD16552.1| putative XRCC3 [Oryza sativa
           Japonica Group] gi|113536681|dbj|BAF09064.1|
           Os02g0562100 [Oryza sativa Japonica Group]
           gi|125582531|gb|EAZ23462.1| hypothetical protein
           OsJ_07156 [Oryza sativa Japonica Group]
          Length = 290

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/78 (58%), Positives = 53/78 (67%)
 Frame = -1

Query: 315 WSSGRRVGAALGMAWASCVNSRLFLSRYDEVVGRNCEGDLGEGEYRVRTRRRIHVVFAPH 136
           WSSGRRV  ALG+AWA+CVN+RLFL+R  +  GR C             RRR+ V FAPH
Sbjct: 222 WSSGRRVSPALGIAWANCVNTRLFLTR--DADGRGC------------ARRRMKVAFAPH 267

Query: 135 LPESSCEFEILRDGVFGV 82
           LPE +CEF I RDGVFGV
Sbjct: 268 LPERACEFVIRRDGVFGV 285