BLASTX nr result

ID: Cocculus23_contig00030257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030257
         (462 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512568.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_006387880.1| hypothetical protein POPTR_0505s00220g [Popu...    59   9e-07

>ref|XP_002512568.1| conserved hypothetical protein [Ricinus communis]
           gi|223548529|gb|EEF50020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/87 (41%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = -1

Query: 432 MVRVTCKLLIILAVFLVAFVSGTEGGRSMKMK-EKADQPQTXXXXXXXXXXXXXXXXXXX 256
           M R   KLL+IL +FLV      EGGR +K   EK DQPQ                    
Sbjct: 1   MERAATKLLVILTLFLVVLACNVEGGRRLKQSHEKVDQPQNYFGGFGGTGAVIPTPFGPT 60

Query: 255 XXXFNPTTFCSFPGVGCVPVSPSIPHL 175
                P+ FCSFPGVGCV V P  P L
Sbjct: 61  IAF-GPSGFCSFPGVGCVRVQPQQPTL 86


>ref|XP_006387880.1| hypothetical protein POPTR_0505s00220g [Populus trichocarpa]
           gi|550308747|gb|ERP46794.1| hypothetical protein
           POPTR_0505s00220g [Populus trichocarpa]
          Length = 96

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/83 (39%), Positives = 44/83 (53%)
 Frame = -1

Query: 444 REAEMVRVTCKLLIILAVFLVAFVSGTEGGRSMKMKEKADQPQTXXXXXXXXXXXXXXXX 265
           R A+M R T ++L+ILA+F++   S  E GR +K KEKADQPQ                 
Sbjct: 6   RSAKMER-TQRMLLILAIFILVLASNVEAGRKLKDKEKADQPQN-YLGGFGTSGGFIPSP 63

Query: 264 XXXXXXFNPTTFCSFPGVGCVPV 196
                   PT +CS+PGVGCV +
Sbjct: 64  NGPVFQLGPTGYCSYPGVGCVRI 86


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