BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030135
         (321 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prun...    72   6e-11
emb|CBI37903.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...    69   9e-10
gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]      68   1e-09
ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
gb|EYU37931.1| hypothetical protein MIMGU_mgv1a003299mg [Mimulus...    63   4e-08
ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfam...    61   1e-07
ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citr...    60   2e-07
gb|EPS74289.1| hypothetical protein M569_00469, partial [Genlise...    59   9e-07

>ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prunus persica]
           gi|462396991|gb|EMJ02790.1| hypothetical protein
           PRUPE_ppa020837mg [Prunus persica]
          Length = 610

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -2

Query: 209 PCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGKWVHLH 30
           PC++QS+  LCSQ  L  A+               +TL FL++QC ++ SLREGKWVH+H
Sbjct: 23  PCVVQSLLKLCSQGHLSQALSSLDLLVQKGIRLPTKTLAFLIQQCGATGSLREGKWVHIH 82

Query: 29  LKLTGYKRP 3
           L+LTG+K P
Sbjct: 83  LRLTGFKHP 91


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           +K R RPC+++++  LC + KL  AV               RTL  LL+ CA S++LREG
Sbjct: 19  RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREG 78

Query: 47  KWVHLHLKLTGYKRP 3
           K VHLHLKLTG KRP
Sbjct: 79  KRVHLHLKLTGLKRP 93


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           +K R RPC+++++  LC + KL  AV               RTL  LL+ CA S++LREG
Sbjct: 19  RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREG 78

Query: 47  KWVHLHLKLTGYKRP 3
           K VHLHLKLTG KRP
Sbjct: 79  KRVHLHLKLTGLKRP 93


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -2

Query: 209 PCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGKWVHLH 30
           PCI++S+  L SQ +L  A+               +TL +LL+QCA++KSL+ GKWVHLH
Sbjct: 16  PCIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLH 75

Query: 29  LKLTGYKRP 3
           LK+TG KRP
Sbjct: 76  LKVTGLKRP 84


>gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]
          Length = 637

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -2

Query: 224 KSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGK 45
           K+R  PC+ QS+  L SQ  L  A+               + L  LL+ C   +SLREGK
Sbjct: 43  KNRNLPCLAQSLLHLASQGNLSQAISSLDVLVQKGIRLPTKALALLLQHCGDRRSLREGK 102

Query: 44  WVHLHLKLTGYKRP 3
           WVHLHLKLTG KRP
Sbjct: 103 WVHLHLKLTGLKRP 116


>ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Solanum lycopersicum]
          Length = 602

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = -2

Query: 224 KSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGK 45
           K     C++Q + +L SQ  LK A                +TL F+++QCA+S+S  EGK
Sbjct: 17  KKLKNSCLVQKILNLSSQGYLKQAFNYLNILTRKGIRLDSKTLAFIIQQCANSRSREEGK 76

Query: 44  WVHLHLKLTGYKRP 3
           W+HLHLK TG+K P
Sbjct: 77  WIHLHLKTTGWKHP 90


>ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Fragaria vesca subsp. vesca]
          Length = 614

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -2

Query: 224 KSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGK 45
           K++P  C++QS+  LCSQ +L  AV               + L  +++ C  ++SLR+GK
Sbjct: 23  KTKPS-CLVQSILSLCSQGRLSQAVSSLDLLFRKGIRLPTKALALVVQHCRDTRSLRDGK 81

Query: 44  WVHLHLKLTGYKRP 3
           WVH +L+LTG+KRP
Sbjct: 82  WVHFYLRLTGFKRP 95


>gb|EYU37931.1| hypothetical protein MIMGU_mgv1a003299mg [Mimulus guttatus]
          Length = 594

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/75 (44%), Positives = 44/75 (58%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           K+ R  PC +Q+V DL S+ +L+ AV+                +  L+ QCA +KS+R G
Sbjct: 4   KRFRRYPCAVQNVVDLTSRGQLREAVDALPLLSRNGFLLNSDLIASLIHQCAGAKSIRFG 63

Query: 47  KWVHLHLKLTGYKRP 3
           K VHLHLKLTG KRP
Sbjct: 64  KSVHLHLKLTGSKRP 78


>ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Solanum tuberosum]
          Length = 617

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = -2

Query: 242 SIRARKKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSK 63
           ++R  KK     C++Q + +L SQ  LK A                +TL  +++QCA+S+
Sbjct: 12  TLRTNKKLN-NSCLVQKILNLSSQGYLKQAFNYLNILTRKGIRLNSKTLASIIQQCANSR 70

Query: 62  SLREGKWVHLHLKLTGYKRP 3
           S  EGKW+HLHLK TG+K P
Sbjct: 71  SREEGKWIHLHLKTTGWKHP 90


>ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like isoform X2 [Citrus sinensis]
          Length = 578

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           +K+ P  C+IQS   L S+ +L  A+                TL F+L+QCA SKSL+ G
Sbjct: 12  RKNLPNNCLIQSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLG 71

Query: 47  KWVHLHLKLTGYKRP 3
           K VHLHLKLT  K P
Sbjct: 72  KRVHLHLKLTQRKTP 86


>ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like isoform X1 [Citrus sinensis]
          Length = 605

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           +K+ P  C+IQS   L S+ +L  A+                TL F+L+QCA SKSL+ G
Sbjct: 12  RKNLPNNCLIQSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLG 71

Query: 47  KWVHLHLKLTGYKRP 3
           K VHLHLKLT  K P
Sbjct: 72  KRVHLHLKLTQRKTP 86


>ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508705834|gb|EOX97730.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 610

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = -2

Query: 221 SRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGKW 42
           S+  PC+I+S  +  S+  L  A+               +TL  LL+QCA +KSL+EGK+
Sbjct: 17  SKKPPCLIKSFLNFTSRGHLSQAISSLELLTRKGIRLPSQTLASLLQQCAKTKSLKEGKF 76

Query: 41  VHLHLKLTGYKRP 3
           +HLHLKLTG K P
Sbjct: 77  LHLHLKLTGLKSP 89


>ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citrus clementina]
           gi|557546563|gb|ESR57541.1| hypothetical protein
           CICLE_v10024503mg [Citrus clementina]
          Length = 595

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 41/74 (55%)
 Frame = -2

Query: 224 KSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREGK 45
           K+ P  C+IQS   L S+ +L  A+                TL F+L+QCA SKSL+ GK
Sbjct: 14  KNLPNNCLIQSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLGK 73

Query: 44  WVHLHLKLTGYKRP 3
            VHLHLKLT  K P
Sbjct: 74  RVHLHLKLTQRKTP 87


>gb|EPS74289.1| hypothetical protein M569_00469, partial [Genlisea aurea]
          Length = 445

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = -2

Query: 227 KKSRPRPCIIQSVFDLCSQKKLKLAVEXXXXXXXXXXXXXXRTLGFLLRQCASSKSLREG 48
           +K+R  PC++Q +FDL  +++L+ AV+              R +  L+RQCA  KS+  G
Sbjct: 9   RKTRKYPCLVQKLFDLTCRRRLRDAVDILPLLSRNGIRLKSRVIASLIRQCADEKSVDSG 68

Query: 47  KWVHLHLKLTGYKR 6
             V LHLKLTG KR
Sbjct: 69  NLVGLHLKLTGRKR 82