BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030125
         (944 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat...   379   e-102
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   373   e-101
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              373   e-101
gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis]     362   9e-98
ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutr...   357   3e-96
ref|NP_187753.1| mitochondrial RNA editing factor 10 [Arabidopsi...   354   2e-95
ref|XP_006299290.1| hypothetical protein CARUB_v10015444mg [Caps...   352   9e-95
ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citr...   351   2e-94
ref|XP_007203758.1| hypothetical protein PRUPE_ppa003558mg [Prun...   350   6e-94
ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat...   348   1e-93
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat...   347   5e-93
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat...   346   9e-93
ref|XP_007027780.1| Pentatricopeptide repeat (PPR) superfamily p...   338   2e-90
ref|XP_002882733.1| pentatricopeptide repeat-containing protein ...   338   2e-90
ref|XP_006341234.1| PREDICTED: putative pentatricopeptide repeat...   319   9e-85
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu...   318   1e-84
ref|XP_004246502.1| PREDICTED: putative pentatricopeptide repeat...   316   1e-83
gb|EPS64087.1| hypothetical protein M569_10688 [Genlisea aurea]       288   3e-75
ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat...   280   8e-73
ref|XP_007144843.1| hypothetical protein PHAVU_007G188900g [Phas...   277   4e-72

>ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 608

 Score =  379 bits (972), Expect = e-102
 Identities = 182/272 (66%), Positives = 222/272 (81%)
 Frame = +2

Query: 128 TTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQL 307
           T+ +PWNSRLR+LAK  LF EAL LYRQMLRFG PPNAFTFPFALKSCAAL+LP++G+ L
Sbjct: 3   TSTSPWNSRLRDLAKQSLFSEALSLYRQMLRFGHPPNAFTFPFALKSCAALALPLTGSLL 62

Query: 308 HCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNF 487
           H H++K+GC+PEPFV TSLISMYCKC L ++AR+VF++SPQ K LTVCYNAL++G   N 
Sbjct: 63  HSHVLKTGCDPEPFVQTSLISMYCKCCLTDDARKVFDESPQRK-LTVCYNALISGHASNS 121

Query: 488 RCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLN 667
           +  DA+ LF++M  +GV  NS+TMLG+IP CA P H+S GM +HG +VK GLD ++SV N
Sbjct: 122 KLRDAVLLFRRMREEGVGVNSVTMLGLIPGCAAPGHLSLGMCLHGSSVKCGLDSDLSVRN 181

Query: 668 CLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSP 847
           CLLTMYV+CG    ARK+FD MP K LI+WNA+ISGYAQNGLA++VL LYREME+ G  P
Sbjct: 182 CLLTMYVKCGLVDNARKIFDAMPEKGLITWNAMISGYAQNGLASHVLNLYREMEACGFFP 241

Query: 848 DPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           DPVTLV VLSSC HLGAH +GRE+ER +  SG
Sbjct: 242 DPVTLVGVLSSCTHLGAHGVGREVERRIESSG 273



 Score =  144 bits (364), Expect = 4e-32
 Identities = 85/258 (32%), Positives = 133/258 (51%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +   A N   ++A+LL+R+M   G   N+ T    +  CAA      G  LH   +
Sbjct: 110 YNALISGHASNSKLRDAVLLFRRMREEGVGVNSVTMLGLIPGCAAPGHLSLGMCLHGSSV 169

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + +  V   L++MY KC LV+NAR++F+  P+   +T  +NA+++G+  N      
Sbjct: 170 KCGLDSDLSVRNCLLTMYVKCGLVDNARKIFDAMPEKGLIT--WNAMISGYAQNGLASHV 227

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+++M   G   + +T++GV+ +C        G  V       G      + N L+ M
Sbjct: 228 LNLYREMEACGFFPDPVTLVGVLSSCTHLGAHGVGREVERRIESSGFGSNPYLKNALINM 287

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   A  +FD MP K L++W AII GY  +G     L L+ EM  SG+ PD    
Sbjct: 288 YTRCGNLVRAHSIFDVMPEKSLVTWTAIIGGYGMHGHGEVALELFEEMIVSGIRPDKAVF 347

Query: 863 VSVLSSCAHLGAHRIGRE 916
           V+VLS+C+H G    G E
Sbjct: 348 VTVLSACSHAGLTDEGLE 365



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 6/228 (2%)
 Frame = +2

Query: 77  KRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           K  ++ +A+ +   +    +  WN+ +   A+N L    L LYR+M   G  P+  T   
Sbjct: 189 KCGLVDNARKIFDAMPEKGLITWNAMISGYAQNGLASHVLNLYREMEACGFFPDPVTLVG 248

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
            L SC  L     G ++   +  SG    P++  +LI+MY +C  +  A  +F+  P+  
Sbjct: 249 VLSSCTHLGAHGVGREVERRIESSGFGSNPYLKNALINMYTRCGNLVRAHSIFDVMPEKS 308

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
            +T  + A++ G+ ++     A+ LF++M   G+  +    + V+ AC+       G+T 
Sbjct: 309 LVT--WTAIIGGYGMHGHGEVALELFEEMIVSGIRPDKAVFVTVLSACS-----HAGLTD 361

Query: 617 HGCNVKRGLDVEISV------LNCLLTMYVRCGSTGLARKMFDEMPRK 742
            G      ++    +       +C++ +  R G    A+++ D M  K
Sbjct: 362 EGLEYFAAMEKNYRLQPGPEHYSCMVDLLGRAGRLKEAKELIDSMQVK 409


>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  373 bits (958), Expect = e-101
 Identities = 177/271 (65%), Positives = 222/271 (81%)
 Frame = +2

Query: 131 TITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLH 310
           T   WN+RLRELA+ R F+EAL LY QML  GD PNAFTFPFA KSCA+LSLP++G+QLH
Sbjct: 20  TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79

Query: 311 CHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFR 490
            H+IK+GCEPEPFV TSLISMYCKCS + +AR+VF+++  S+ L VCYNAL+AG++LN R
Sbjct: 80  GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139

Query: 491 CYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNC 670
             DA+ LF+QM ++GV+ N++TMLG+IP CA P+H+ FG ++H C+V+ GLD ++SV NC
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199

Query: 671 LLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPD 850
           LLTMYVRCGS   ARK+FD MP K LI+WNA+ISGYAQNGLA +VL LYR+ME +G+ PD
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259

Query: 851 PVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           PVTLV VLSSCAHLGAH  GRE+E+ +  SG
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRIELSG 290



 Score =  135 bits (339), Expect = 3e-29
 Identities = 84/252 (33%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +   + N  F +A+LL+RQM + G   NA T    +  CA       G  LH   +
Sbjct: 127 YNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSV 186

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           + G + +  V   L++MY +C  V+ AR++F+  P+   +T  +NA+++G+  N      
Sbjct: 187 RFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLIT--WNAMISGYAQNGLAGHV 244

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACA-LPLHISFGMTVHGCNVKRGLDVEISVLNCLLT 679
           + L+++M   G+  + +T++GV+ +CA L  H + G  V       G      + N L+ 
Sbjct: 245 LDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA-GREVEQRIELSGFGFNPFLKNALIN 303

Query: 680 MYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVT 859
           MY RCG+   AR +FD M  K +ISW AII+GY  +G     + L+ EM SS   PD   
Sbjct: 304 MYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAA 363

Query: 860 LVSVLSSCAHLG 895
            VSVLS+C+H G
Sbjct: 364 FVSVLSACSHAG 375


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  373 bits (958), Expect = e-101
 Identities = 177/271 (65%), Positives = 222/271 (81%)
 Frame = +2

Query: 131 TITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLH 310
           T   WN+RLRELA+ R F+EAL LY QML  GD PNAFTFPFA KSCA+LSLP++G+QLH
Sbjct: 20  TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79

Query: 311 CHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFR 490
            H+IK+GCEPEPFV TSLISMYCKCS + +AR+VF+++  S+ L VCYNAL+AG++LN R
Sbjct: 80  GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139

Query: 491 CYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNC 670
             DA+ LF+QM ++GV+ N++TMLG+IP CA P+H+ FG ++H C+V+ GLD ++SV NC
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199

Query: 671 LLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPD 850
           LLTMYVRCGS   ARK+FD MP K LI+WNA+ISGYAQNGLA +VL LYR+ME +G+ PD
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259

Query: 851 PVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           PVTLV VLSSCAHLGAH  GRE+E+ +  SG
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRIELSG 290



 Score =  135 bits (339), Expect = 3e-29
 Identities = 84/252 (33%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +   + N  F +A+LL+RQM + G   NA T    +  CA       G  LH   +
Sbjct: 127 YNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSV 186

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           + G + +  V   L++MY +C  V+ AR++F+  P+   +T  +NA+++G+  N      
Sbjct: 187 RFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLIT--WNAMISGYAQNGLAGHV 244

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACA-LPLHISFGMTVHGCNVKRGLDVEISVLNCLLT 679
           + L+++M   G+  + +T++GV+ +CA L  H + G  V       G      + N L+ 
Sbjct: 245 LDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA-GREVEQRIELSGFGFNPFLKNALIN 303

Query: 680 MYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVT 859
           MY RCG+   AR +FD M  K +ISW AII+GY  +G     + L+ EM SS   PD   
Sbjct: 304 MYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAA 363

Query: 860 LVSVLSSCAHLG 895
            VSVLS+C+H G
Sbjct: 364 FVSVLSACSHAG 375


>gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis]
          Length = 636

 Score =  362 bits (930), Expect = 9e-98
 Identities = 176/285 (61%), Positives = 216/285 (75%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           ++S  ++   +  TT  PWN+ LRELAK  LF EAL LYR+MLR G  PNAFTFPF LKS
Sbjct: 12  LNSHSAIARSLLTTTAIPWNTHLRELAKQCLFSEALNLYRRMLRSGQSPNAFTFPFVLKS 71

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA+LSL  +G  LH H+IK GCEPEPFV TSLISMYCKC LV+NAR+VF+++PQS+ LTV
Sbjct: 72  CASLSLSTAGKLLHGHVIKIGCEPEPFVQTSLISMYCKCCLVDNARKVFDENPQSRNLTV 131

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
           CYNAL++G+TLN +  D + LF +M   GV  NS+TMLG+IP CA P++++ GM  HG  
Sbjct: 132 CYNALISGYTLNSKFLDGIVLFSKMRETGVAVNSVTMLGLIPRCAEPVYLALGMCFHGFC 191

Query: 629 VKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVL 808
           VK GLD++ S+ NCLLTMYV+CGS   AR +FD MP K LI+WNA+ISGYAQNG AT VL
Sbjct: 192 VKSGLDIDFSIGNCLLTMYVKCGSVQYARSLFDAMPEKGLITWNAMISGYAQNGFATEVL 251

Query: 809 GLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
            LYREM+  G+  DPVTLV VLSSC HLGAH +GRE+E+ V   G
Sbjct: 252 DLYREMKLCGIYLDPVTLVGVLSSCTHLGAHGVGREVEQQVQLCG 296



 Score =  128 bits (321), Expect = 4e-27
 Identities = 73/258 (28%), Positives = 129/258 (50%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N  F + ++L+ +M   G   N+ T    +  CA       G   H   +
Sbjct: 133 YNALISGYTLNSKFLDGIVLFSKMRETGVAVNSVTMLGLIPRCAEPVYLALGMCFHGFCV 192

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           KSG + +  +   L++MY KC  V+ AR +F+  P+   +T  +NA+++G+  N    + 
Sbjct: 193 KSGLDIDFSIGNCLLTMYVKCGSVQYARSLFDAMPEKGLIT--WNAMISGYAQNGFATEV 250

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+++M   G+  + +T++GV+ +C        G  V       G D    + N L+ M
Sbjct: 251 LDLYREMKLCGIYLDPVTLVGVLSSCTHLGAHGVGREVEQQVQLCGFDSNPFLKNSLINM 310

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR++FD +  K ++SW  +I GY  +G     + L+ EM  +G+ PD    
Sbjct: 311 YARCGNLVKAREIFDSVLEKSIVSWTGVIGGYGVHGHGEIAVQLFEEMIKTGIRPDKTAF 370

Query: 863 VSVLSSCAHLGAHRIGRE 916
           VS++S+C+H G    G E
Sbjct: 371 VSIISACSHSGMTDKGLE 388



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           +  A+SL   +    +  WN+ +   A+N    E L LYR+M   G   +  T    L S
Sbjct: 216 VQYARSLFDAMPEKGLITWNAMISGYAQNGFATEVLDLYREMKLCGIYLDPVTLVGVLSS 275

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           C  L     G ++   +   G +  PF+  SLI+MY +C  +  AR++F+     ++  V
Sbjct: 276 CTHLGAHGVGREVEQQVQLCGFDSNPFLKNSLINMYARCGNLVKAREIFDS--VLEKSIV 333

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            +  ++ G+ ++     A+ LF++M + G+  +    + +I AC+       GMT  G  
Sbjct: 334 SWTGVIGGYGVHGHGEIAVQLFEEMIKTGIRPDKTAFVSIISACS-----HSGMTDKGLE 388

Query: 629 V------KRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAIIS 772
                  K GL       +C++ +  R G    A+ + + M    +   W A+++
Sbjct: 389 YFSAMKSKYGLQPGPEHYSCVVDLLGRAGRLKEAKDLINSMQVNPDGAVWGALLN 443


>ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutrema salsugineum]
           gi|557108591|gb|ESQ48898.1| hypothetical protein
           EUTSA_v10022435mg [Eutrema salsugineum]
          Length = 625

 Score =  357 bits (917), Expect = 3e-96
 Identities = 170/278 (61%), Positives = 217/278 (78%)
 Frame = +2

Query: 110 NFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLP 289
           N  VAA   TPWN RLRELA   LF EA+ LYR MLR G  P+AF++PF LKSCAALSLP
Sbjct: 12  NSVVAAVASTPWNVRLRELAYQSLFAEAISLYRSMLRSGSSPDAFSYPFTLKSCAALSLP 71

Query: 290 ISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLA 469
           +SG QLHCH+I+ GCE EPFV+T+LISMYCKC LV  AR+VF+++PQS+ L VCYNAL+A
Sbjct: 72  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVGEARKVFDENPQSRHLGVCYNALIA 131

Query: 470 GFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDV 649
           G+  N +  DA+ +F++M   GV  +S+TMLG++P C +P H+  GM++HG  VK G D 
Sbjct: 132 GYKANSKVTDAVCMFRKMKETGVPVDSVTMLGLVPVCTVPDHLWLGMSLHGQCVKGGTDS 191

Query: 650 EISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREME 829
           E++VLN  +TMY++CGS    R++FDEM  K LI+WNA+ISGYAQNGLA +VL LY +M+
Sbjct: 192 ELAVLNSFVTMYMKCGSVEFGRRLFDEMHVKGLITWNAVISGYAQNGLAHDVLELYEKMK 251

Query: 830 SSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           SSGV PDPVTLVSVLSSCAHLGA +IG+E+E+L+  +G
Sbjct: 252 SSGVCPDPVTLVSVLSSCAHLGAKKIGQEVEKLIEANG 289



 Score =  136 bits (342), Expect = 1e-29
 Identities = 79/259 (30%), Positives = 133/259 (51%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N    +A+ ++R+M   G P ++ T    +  C        G  LH   +
Sbjct: 126 YNALIAGYKANSKVTDAVCMFRKMKETGVPVDSVTMLGLVPVCTVPDHLWLGMSLHGQCV 185

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + E  V+ S ++MY KC  VE  R++F++      +T  +NA+++G+  N   +D 
Sbjct: 186 KGGTDSELAVLNSFVTMYMKCGSVEFGRRLFDEMHVKGLIT--WNAVISGYAQNGLAHDV 243

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+++M   GV  + +T++ V+ +CA       G  V       G    + + N L++M
Sbjct: 244 LELYEKMKSSGVCPDPVTLVSVLSSCAHLGAKKIGQEVEKLIEANGFVSNMFLSNGLISM 303

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FD +P K L+SW A+I  Y  +G+A   L L+ +M  SG+ PD    
Sbjct: 304 YARCGNLAKARAVFDIIPVKSLVSWTAMIGCYGMHGMAETGLKLFDDMIKSGMRPDGTVF 363

Query: 863 VSVLSSCAHLGAHRIGREI 919
           V VLS+C+H G    G E+
Sbjct: 364 VMVLSACSHSGLTDKGLEL 382



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
 Frame = +2

Query: 116 EVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPIS 295
           E+    +  WN+ +   A+N L  + L LY +M   G  P+  T    L SCA L     
Sbjct: 218 EMHVKGLITWNAVISGYAQNGLAHDVLELYEKMKSSGVCPDPVTLVSVLSSCAHLGAKKI 277

Query: 296 GAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGF 475
           G ++   +  +G     F+   LISMY +C  +  AR VF+  P   +  V + A++  +
Sbjct: 278 GQEVEKLIEANGFVSNMFLSNGLISMYARCGNLAKARAVFDIIP--VKSLVSWTAMIGCY 335

Query: 476 TLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEI 655
            ++      + LF  M + G+  +    + V+ AC+       G+ + G ++KR  +V+ 
Sbjct: 336 GMHGMAETGLKLFDDMIKSGMRPDGTVFVMVLSACSHSGLTDKGLELFG-SMKREYNVKP 394

Query: 656 SV--LNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAII 769
                +C++ +  R G    A +  + MP   +   W A++
Sbjct: 395 GPEHYSCVVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 435


>ref|NP_187753.1| mitochondrial RNA editing factor 10 [Arabidopsis thaliana]
           gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g11460 gi|12322902|gb|AAG51440.1|AC008153_13
           hypothetical protein; 50785-52656 [Arabidopsis thaliana]
           gi|332641528|gb|AEE75049.1| mitochondrial RNA editing
           factor 10 [Arabidopsis thaliana]
          Length = 623

 Score =  354 bits (909), Expect = 2e-95
 Identities = 168/278 (60%), Positives = 217/278 (78%)
 Frame = +2

Query: 110 NFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLP 289
           N  VAA   TPWN RLRELA   LF E++ LYR MLR G  P+AF+FPF LKSCA+LSLP
Sbjct: 10  NSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 69

Query: 290 ISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLA 469
           +SG QLHCH+ K GCE EPFV+T+LISMYCKC LV +AR+VFE++PQS +L+VCYNAL++
Sbjct: 70  VSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALIS 129

Query: 470 GFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDV 649
           G+T N +  DA  +F++M   GV+ +S+TMLG++P C +P ++  G ++HG  VK GLD 
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189

Query: 650 EISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREME 829
           E++VLN  +TMY++CGS    R++FDEMP K LI+WNA+ISGY+QNGLA +VL LY +M+
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249

Query: 830 SSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           SSGV PDP TLVSVLSSCAHLGA +IG E+ +LV  +G
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287



 Score =  138 bits (348), Expect = 3e-30
 Identities = 82/261 (31%), Positives = 130/261 (49%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N    +A  ++R+M   G   ++ T    +  C        G  LH   +
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + E  V+ S I+MY KC  VE  R++F++ P    +T  +NA+++G++ N   YD 
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT--WNAVISGYSQNGLAYDV 241

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L++QM   GV  +  T++ V+ +CA       G  V       G    + V N  ++M
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FD MP K L+SW A+I  Y  +G+    L L+ +M   G+ PD    
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361

Query: 863 VSVLSSCAHLGAHRIGREIER 925
           V VLS+C+H G    G E+ R
Sbjct: 362 VMVLSACSHSGLTDKGLELFR 382



 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           + + + L  E+    +  WN+ +   ++N L  + L LY QM   G  P+ FT    L S
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS 266

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA L     G ++   +  +G  P  FV  + ISMY +C  +  AR VF+  P   +  V
Sbjct: 267 CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLV 324

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            + A++  + ++      + LF  M + G+  +    + V+ AC+       G+T  G  
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS-----HSGLTDKGLE 379

Query: 629 VKRGLDVEISV------LNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAII 769
           + R +  E  +       +CL+ +  R G    A +  + MP   +   W A++
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433


>ref|XP_006299290.1| hypothetical protein CARUB_v10015444mg [Capsella rubella]
           gi|482567999|gb|EOA32188.1| hypothetical protein
           CARUB_v10015444mg [Capsella rubella]
          Length = 623

 Score =  352 bits (904), Expect = 9e-95
 Identities = 169/278 (60%), Positives = 218/278 (78%)
 Frame = +2

Query: 110 NFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLP 289
           NF VAA   TPWN RLRELA    F E++ LYR MLR G  P+AF+FPF LKSCAALSLP
Sbjct: 10  NFGVAAVASTPWNVRLRELAYQSSFAESVSLYRSMLRSGTSPDAFSFPFILKSCAALSLP 69

Query: 290 ISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLA 469
           +SG QLHCH+I+ GCE EPFV+T+LISMYCKC LVE+AR+VF+++PQS +L VCYNAL++
Sbjct: 70  VSGKQLHCHVIRGGCEGEPFVLTALISMYCKCGLVEDARKVFDENPQSSQLGVCYNALIS 129

Query: 470 GFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDV 649
           G+T N +  DA  +F++M   GV+ +S+TMLG++P C  P ++  G ++HG  VK G D 
Sbjct: 130 GYTANSKVSDAAFMFRRMKETGVSVDSVTMLGLVPLCTAPDYLWLGRSLHGECVKGGTDS 189

Query: 650 EISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREME 829
           E++VLN L+TMY++CGS    R++FDE+P K LISWNA+ISGY+QNGLA +VL LY  M+
Sbjct: 190 ELAVLNSLITMYMKCGSVESGRRLFDELPVKGLISWNAVISGYSQNGLAYDVLELYELMK 249

Query: 830 SSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           SSGV PDPVTLVSVLSSCAHLGA ++G+E+ +LV  +G
Sbjct: 250 SSGVFPDPVTLVSVLSSCAHLGAKKVGQEVGKLVEANG 287



 Score =  141 bits (355), Expect = 4e-31
 Identities = 81/259 (31%), Positives = 132/259 (50%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N    +A  ++R+M   G   ++ T    +  C A      G  LH   +
Sbjct: 124 YNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTMLGLVPLCTAPDYLWLGRSLHGECV 183

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + E  V+ SLI+MY KC  VE+ R++F++ P    ++  +NA+++G++ N   YD 
Sbjct: 184 KGGTDSELAVLNSLITMYMKCGSVESGRRLFDELPVKGLIS--WNAVISGYSQNGLAYDV 241

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L++ M   GV  + +T++ V+ +CA       G  V       G    + V N L++M
Sbjct: 242 LELYELMKSSGVFPDPVTLVSVLSSCAHLGAKKVGQEVGKLVEANGFGSNVFVSNALISM 301

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FD MP K L+SW A+I  Y  +G+    L L+ +M   G+ PD    
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLMLFDDMIKRGIRPDGTVF 361

Query: 863 VSVLSSCAHLGAHRIGREI 919
           V  LS+C+H G    G E+
Sbjct: 362 VMTLSACSHSGLTDKGLEL 380



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 7/234 (2%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           + S + L  E+    +  WN+ +   ++N L  + L LY  M   G  P+  T    L S
Sbjct: 207 VESGRRLFDELPVKGLISWNAVISGYSQNGLAYDVLELYELMKSSGVFPDPVTLVSVLSS 266

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA L     G ++   +  +G     FV  +LISMY +C  +  AR VF+  P   +  V
Sbjct: 267 CAHLGAKKVGQEVGKLVEANGFGSNVFVSNALISMYARCGNLAKARAVFDIMP--VKSLV 324

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            + A++  + ++      + LF  M + G+  +    +  + AC+       G+T  G  
Sbjct: 325 SWTAMIGCYGMHGMGETGLMLFDDMIKRGIRPDGTVFVMTLSACS-----HSGLTDKGLE 379

Query: 629 VKRGLDVEISV------LNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAII 769
           +   +  +  +       +CL+ +  R G    A +  + MP   +   W A++
Sbjct: 380 LFSQMKRDYKLKPGPEHYSCLVDLLGRAGRLDEAMEFINSMPVEADGAVWGALL 433


>ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citrus clementina]
           gi|557532232|gb|ESR43415.1| hypothetical protein
           CICLE_v10011274mg [Citrus clementina]
          Length = 636

 Score =  351 bits (901), Expect = 2e-94
 Identities = 172/287 (59%), Positives = 217/287 (75%), Gaps = 4/287 (1%)
 Frame = +2

Query: 95  SAKSLNFEVAAT----TITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFAL 262
           + K L F++  T      +PWN+RLRELA   LF EAL LYRQML +G  PNAFTFPFAL
Sbjct: 12  ATKQLRFQIPKTPPIAATSPWNTRLRELANQSLFTEALSLYRQMLCYGATPNAFTFPFAL 71

Query: 263 KSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRL 442
           KSC AL LP +G+QLHCH+IKSGCE EPFV+TSL+S+YCKC LV+NAR+VF++S +S  L
Sbjct: 72  KSCTALWLPFAGSQLHCHVIKSGCELEPFVLTSLVSLYCKCRLVDNARKVFDESIKSTHL 131

Query: 443 TVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHG 622
           TVCYNAL++G+ LN    +A++LF +M   GV  NS+TML ++P C  P ++  GM  H 
Sbjct: 132 TVCYNALISGYVLNSLVSEAVSLFGKMREQGVEINSVTMLCLLPICVDPGYLWLGMCCHC 191

Query: 623 CNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATN 802
             VK GLD++ SV NCL+TMYV+CGS    RK+FD++P K LI+WNA+ISGYAQNGLAT+
Sbjct: 192 ICVKFGLDLDFSVGNCLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATD 251

Query: 803 VLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           VL LYREM+S GV PD VT V VLSSCAHLGAH +G E+E+ +  +G
Sbjct: 252 VLELYREMKSLGVCPDAVTFVGVLSSCAHLGAHSVGLEVEQQIQANG 298



 Score =  144 bits (363), Expect = 5e-32
 Identities = 91/280 (32%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
 Frame = +2

Query: 80  RAIISSAKSLNFEVAATTITP-WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           R + ++ K  +  + +T +T  +N+ +     N L  EA+ L+ +M   G   N+ T   
Sbjct: 113 RLVDNARKVFDESIKSTHLTVCYNALISGYVLNSLVSEAVSLFGKMREQGVEINSVTMLC 172

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
            L  C        G   HC  +K G + +  V   L++MY KC  V+  R++F+Q P+  
Sbjct: 173 LLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGNCLMTMYVKCGSVDYGRKLFDQVPEKG 232

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
            +T  +NA+++G+  N    D + L+++M   GV  +++T +GV+ +CA     S G+ V
Sbjct: 233 LIT--WNAMISGYAQNGLATDVLELYREMKSLGVCPDAVTFVGVLSSCAHLGAHSVGLEV 290

Query: 617 HGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLA 796
                  G      + N L+ MY RCG+   AR +FD MPRK ++SW AII GY  +G  
Sbjct: 291 EQQIQANGFGSNPFLNNALINMYARCGNLKKARAIFDGMPRKTVVSWTAIIGGYGIHGHG 350

Query: 797 TNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGRE 916
              + L+ EM  SG+ PD    VSVLS+C+H G    G E
Sbjct: 351 EVAVQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTDKGLE 390


>ref|XP_007203758.1| hypothetical protein PRUPE_ppa003558mg [Prunus persica]
           gi|462399289|gb|EMJ04957.1| hypothetical protein
           PRUPE_ppa003558mg [Prunus persica]
          Length = 566

 Score =  350 bits (897), Expect = 6e-94
 Identities = 162/244 (66%), Positives = 203/244 (83%)
 Frame = +2

Query: 212 MLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSL 391
           MLR G  PNAFTFPFALKSCAALSLP++G+ LHCH++K+GCEPEPFV TSLISMY KC L
Sbjct: 1   MLRHGHSPNAFTFPFALKSCAALSLPLAGSLLHCHVVKTGCEPEPFVQTSLISMYFKCCL 60

Query: 392 VENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVI 571
           V++AR+VF+++P S++LTVCYNAL++G T N +  DA++LF++M   GV  NS+TMLG++
Sbjct: 61  VDDARRVFDENPHSRKLTVCYNALISGHTSNSKFSDAVSLFRRMRAAGVEVNSVTMLGLV 120

Query: 572 PACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELI 751
           P CA P+H+  GM +HGC+VK G DV++SV NCLLTMYV+CGS   ARK+FD MP K LI
Sbjct: 121 PGCAAPVHLRLGMCLHGCSVKCGFDVDLSVTNCLLTMYVKCGSVDHARKLFDTMPEKGLI 180

Query: 752 SWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
           +WNA+ISGY+QNGLAT+VL LY+EMES GVSPDPVTLV VLSSC H+GAH +GRE+ER +
Sbjct: 181 TWNAMISGYSQNGLATHVLNLYKEMESCGVSPDPVTLVGVLSSCTHIGAHGVGREVERRI 240

Query: 932 FCSG 943
              G
Sbjct: 241 ESCG 244



 Score =  134 bits (336), Expect = 7e-29
 Identities = 81/258 (31%), Positives = 132/258 (51%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N  F +A+ L+R+M   G   N+ T    +  CAA      G  LH   +
Sbjct: 81  YNALISGHTSNSKFSDAVSLFRRMRAAGVEVNSVTMLGLVPGCAAPVHLRLGMCLHGCSV 140

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + +  V   L++MY KC  V++AR++F+  P+   +T  +NA+++G++ N      
Sbjct: 141 KCGFDVDLSVTNCLLTMYVKCGSVDHARKLFDTMPEKGLIT--WNAMISGYSQNGLATHV 198

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+K+M   GV+ + +T++GV+ +C        G  V       G      + N L+ M
Sbjct: 199 LNLYKEMESCGVSPDPVTLVGVLSSCTHIGAHGVGREVERRIESCGFGSNPYLNNALVNM 258

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   A  +FD MP K L+SW AII GY  +G       L+ +M  +G+ PD    
Sbjct: 259 YARCGNLVKAHAIFDAMPEKSLVSWTAIIGGYGLHGHGEIASELFNKMIMTGIRPDKAVF 318

Query: 863 VSVLSSCAHLGAHRIGRE 916
           V++LS+C+H G    G E
Sbjct: 319 VTILSACSHAGLTDKGLE 336



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 2/229 (0%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           +  A+ L   +    +  WN+ +   ++N L    L LY++M   G  P+  T    L S
Sbjct: 164 VDHARKLFDTMPEKGLITWNAMISGYSQNGLATHVLNLYKEMESCGVSPDPVTLVGVLSS 223

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           C  +     G ++   +   G    P++  +L++MY +C  +  A  +F+  P+  +  V
Sbjct: 224 CTHIGAHGVGREVERRIESCGFGSNPYLNNALVNMYARCGNLVKAHAIFDAMPE--KSLV 281

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            + A++ G+ L+     A  LF +M   G+  +    + ++ AC+       G+      
Sbjct: 282 SWTAIIGGYGLHGHGEIASELFNKMIMTGIRPDKAVFVTILSACSHAGLTDKGLEYFAAM 341

Query: 629 VKR-GLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRK-ELISWNAII 769
            KR GL       +C++ +  R G    A+++ + MP K +   W A++
Sbjct: 342 EKRCGLQPGPEHYSCMVDLLGRAGRLQEAKELIESMPVKPDGAVWGALL 390


>ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Citrus sinensis]
          Length = 636

 Score =  348 bits (894), Expect = 1e-93
 Identities = 171/283 (60%), Positives = 215/283 (75%), Gaps = 4/283 (1%)
 Frame = +2

Query: 95  SAKSLNFEVAAT----TITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFAL 262
           + K L F++  T      +PWN+RLRELA   LF EAL LYRQML +G  PNAFTFPFAL
Sbjct: 12  ATKQLCFQIPKTPPIAATSPWNTRLRELANQSLFAEALSLYRQMLCYGVTPNAFTFPFAL 71

Query: 263 KSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRL 442
           KSC ALSLP +G+QLHCH+IKSGCE EPFV+TSL+S+YCKC LV+NAR+VF++S +S  L
Sbjct: 72  KSCTALSLPFAGSQLHCHVIKSGCELEPFVLTSLVSLYCKCRLVDNARKVFDESIKSTHL 131

Query: 443 TVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHG 622
           TVCYNAL++G+ LN    +A++LF +M   GV  N +TML ++P C  P ++  GM  H 
Sbjct: 132 TVCYNALISGYVLNSLVSEAVSLFGKMREQGVEINPVTMLCLLPICVDPGYLWLGMCCHC 191

Query: 623 CNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATN 802
             VK GLD++ SV NCL+TMYV+CGS    RK+FD++P K LI+WNA+ISGYAQNGLAT+
Sbjct: 192 ICVKFGLDLDFSVGNCLMTMYVKCGSVDYGRKLFDQVPEKGLITWNAMISGYAQNGLATH 251

Query: 803 VLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
           VL LYREM+S GV PD VT V VLSSCAHLGAH +G E+E+ +
Sbjct: 252 VLELYREMKSLGVCPDGVTFVGVLSSCAHLGAHSVGLEVEQQI 294



 Score =  139 bits (351), Expect = 1e-30
 Identities = 90/280 (32%), Positives = 141/280 (50%), Gaps = 1/280 (0%)
 Frame = +2

Query: 80  RAIISSAKSLNFEVAATTITP-WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           R + ++ K  +  + +T +T  +N+ +     N L  EA+ L+ +M   G   N  T   
Sbjct: 113 RLVDNARKVFDESIKSTHLTVCYNALISGYVLNSLVSEAVSLFGKMREQGVEINPVTMLC 172

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
            L  C        G   HC  +K G + +  V   L++MY KC  V+  R++F+Q P+  
Sbjct: 173 LLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGNCLMTMYVKCGSVDYGRKLFDQVPEKG 232

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
            +T  +NA+++G+  N      + L+++M   GV  + +T +GV+ +CA     S G+ V
Sbjct: 233 LIT--WNAMISGYAQNGLATHVLELYREMKSLGVCPDGVTFVGVLSSCAHLGAHSVGLEV 290

Query: 617 HGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLA 796
                   L     + N L+ MY RCG+   AR +FD MPRK ++SW AII GY  +G  
Sbjct: 291 EQQIEANSLGSNPFLNNALINMYARCGNLKKARAIFDGMPRKTVVSWTAIIGGYGIHGHG 350

Query: 797 TNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGRE 916
              + L+ EM  SG+ PD    VSVLS+C+H G    G E
Sbjct: 351 EVAVQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTDKGLE 390


>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  347 bits (889), Expect = 5e-93
 Identities = 167/269 (62%), Positives = 210/269 (78%)
 Frame = +2

Query: 137 TPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCH 316
           TPWN++LRELAK   F +AL LY QMLR GD PNAFTFPFALKSCAALSLPI G+Q H  
Sbjct: 6   TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 65

Query: 317 LIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCY 496
           + K GC  EPFV T LISMYCK SLV+NAR+VFE++  S++LTVCYNAL++G+  N +C 
Sbjct: 66  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125

Query: 497 DAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLL 676
           DA+ LF+QM  +GV  NS+T+LG+IPAC  P+++  G ++H   +K G D ++SV+NC +
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185

Query: 677 TMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPV 856
           TMY++CGS   A+K+FDEMP K LISWNA++SGYAQNGLATNVL LYR M+ +GV PDPV
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245

Query: 857 TLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           TLV VLSSCA+LGA  +G E+E  +  SG
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASG 274



 Score =  147 bits (372), Expect = 5e-33
 Identities = 88/288 (30%), Positives = 151/288 (52%), Gaps = 3/288 (1%)
 Frame = +2

Query: 77  KRAIISSAKSL---NFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFT 247
           K +++ +A+ +   NF     T+  +N+ +     N    +A+LL+RQM   G P N+ T
Sbjct: 87  KGSLVDNARKVFEENFHSRKLTVC-YNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVT 145

Query: 248 FPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSP 427
               + +C +      G+ LHC  +K G + +  V+   I+MY KC  V  A+++F++ P
Sbjct: 146 LLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMP 205

Query: 428 QSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFG 607
               ++  +NA+++G+  N    + + L++ M  +GV  + +T++GV+ +CA     S G
Sbjct: 206 VKGLIS--WNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 263

Query: 608 MTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQN 787
             V       G      + N L+ MY RCG+   A+ +FD MP + L+SW AII GY  +
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323

Query: 788 GLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
           G     + L++EM  SG+ PD    V VLS+C+H G    G E  +++
Sbjct: 324 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM 371



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = +2

Query: 440 LTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVH 619
           L+  +N  L       +   A++L+ QM R G   N+ T    + +CA       G   H
Sbjct: 4   LSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFH 63

Query: 620 GCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDE--MPRKELISWNAIISGYAQNGL 793
           G   K G   E  V   L++MY +      ARK+F+E    RK  + +NA++SGY  N  
Sbjct: 64  GQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSK 123

Query: 794 ATNVLGLYREMESSGVSPDPVTLVSVLSSC 883
            ++ + L+R+M   GV  + VTL+ ++ +C
Sbjct: 124 CSDAVLLFRQMNEEGVPVNSVTLLGLIPAC 153


>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  346 bits (887), Expect = 9e-93
 Identities = 166/269 (61%), Positives = 210/269 (78%)
 Frame = +2

Query: 137 TPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCH 316
           TPWN++LRELAK   F +AL LY QMLR GD PNAFTFPFALKSCAALSLPI G+Q H  
Sbjct: 15  TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 74

Query: 317 LIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCY 496
           + K GC  EPFV T LISMYCK SLV+NAR+VFE++  S++LTVCYNAL++G+  N +C 
Sbjct: 75  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134

Query: 497 DAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLL 676
           +A+ LF+QM  +GV  NS+T+LG+IPAC  P+++  G ++H   +K G D ++SV+NC +
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194

Query: 677 TMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPV 856
           TMY++CGS   A+K+FDEMP K LISWNA++SGYAQNGLATNVL LYR M+ +GV PDPV
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254

Query: 857 TLVSVLSSCAHLGAHRIGREIERLVFCSG 943
           TLV VLSSCA+LGA  +G E+E  +  SG
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASG 283



 Score =  148 bits (374), Expect = 3e-33
 Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 3/288 (1%)
 Frame = +2

Query: 77  KRAIISSAKSL---NFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFT 247
           K +++ +A+ +   NF     T+  +N+ +     N    EA+LL+RQM   G P N+ T
Sbjct: 96  KGSLVDNARKVFEENFHSRKLTVC-YNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVT 154

Query: 248 FPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSP 427
               + +C +      G+ LHC  +K G + +  V+   I+MY KC  V  A+++F++ P
Sbjct: 155 LLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMP 214

Query: 428 QSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFG 607
               ++  +NA+++G+  N    + + L++ M  +GV  + +T++GV+ +CA     S G
Sbjct: 215 VKGLIS--WNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 272

Query: 608 MTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQN 787
             V       G      + N L+ MY RCG+   A+ +FD MP + L+SW AII GY  +
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332

Query: 788 GLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
           G     + L++EM  SG+ PD    V VLS+C+H G    G E  +++
Sbjct: 333 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM 380



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
 Frame = +2

Query: 419 QSPQSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHI 598
           +S     L+  +N  L       +   A++L+ QM R G   N+ T    + +CA     
Sbjct: 6   KSKSMNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLP 65

Query: 599 SFGMTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDE--MPRKELISWNAIIS 772
             G   HG   K G   E  V   L++MY +      ARK+F+E    RK  + +NA++S
Sbjct: 66  ILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVS 125

Query: 773 GYAQNGLATNVLGLYREMESSGVSPDPVTLVSVLSSC 883
           GY  N   +  + L+R+M   GV  + VTL+ ++ +C
Sbjct: 126 GYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPAC 162


>ref|XP_007027780.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508716385|gb|EOY08282.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 610

 Score =  338 bits (867), Expect = 2e-90
 Identities = 166/271 (61%), Positives = 211/271 (77%)
 Frame = +2

Query: 131 TITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLH 310
           T  PWN++LRELAK   + +AL LYRQMLR G  PNAF+FPFALKS  +LSLP SG QLH
Sbjct: 2   TSIPWNTQLRELAKQCQYLQALTLYRQMLRCGSTPNAFSFPFALKSSVSLSLPFSGQQLH 61

Query: 311 CHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFR 490
           CH+IKSGC PEPFV+TSLISMYCK + VENAR+VF+++P S +LTVCYNALL+G+ L FR
Sbjct: 62  CHVIKSGCCPEPFVLTSLISMYCKFNSVENARKVFDENPISNQLTVCYNALLSGYALTFR 121

Query: 491 CYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNC 670
            ++  +LF +M   GV+ NS+T+LG+IP  + P + S GM+ H C VK GL+++ SV NC
Sbjct: 122 VFEGFSLFCKMREMGVSVNSVTILGLIPMFSEPGYFSAGMSFHCCCVKLGLNLDFSVSNC 181

Query: 671 LLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPD 850
           LLTMYV+CG+    RK+FDEMP+K LI+WNA+ISGYAQNGLA+NVL LY++M++     D
Sbjct: 182 LLTMYVKCGAIEFGRKLFDEMPKKGLITWNAMISGYAQNGLASNVLELYKKMKACRNCAD 241

Query: 851 PVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
            VT V VLSSCAHLGA  +GRE+E+ +  SG
Sbjct: 242 AVTFVGVLSSCAHLGAISVGREVEQRIEFSG 272



 Score =  124 bits (312), Expect = 4e-26
 Identities = 74/236 (31%), Positives = 119/236 (50%)
 Frame = +2

Query: 188 EALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLI 367
           E   L+ +M   G   N+ T    +   +      +G   HC  +K G   +  V   L+
Sbjct: 124 EGFSLFCKMREMGVSVNSVTILGLIPMFSEPGYFSAGMSFHCCCVKLGLNLDFSVSNCLL 183

Query: 368 SMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFN 547
           +MY KC  +E  R++F++ P+   +T  +NA+++G+  N    + + L+K+M       +
Sbjct: 184 TMYVKCGAIEFGRKLFDEMPKKGLIT--WNAMISGYAQNGLASNVLELYKKMKACRNCAD 241

Query: 548 SITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFD 727
           ++T +GV+ +CA    IS G  V       GL +   + N L+ MY RCG+   AR +FD
Sbjct: 242 AVTFVGVLSSCAHLGAISVGREVEQRIEFSGLSLNPFLNNALINMYARCGNLVKARAIFD 301

Query: 728 EMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLG 895
            M  K ++SW AII GY  +G     + L+ EM   G+ PD    VSVL +C+H G
Sbjct: 302 GMLVKSVVSWTAIIGGYGMHGYGEIAVELFDEMIKGGIRPDGAAFVSVLCACSHAG 357



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 45/169 (26%), Positives = 80/169 (47%)
 Frame = +2

Query: 77  KRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           K   I   + L  E+    +  WN+ +   A+N L    L LY++M    +  +A TF  
Sbjct: 188 KCGAIEFGRKLFDEMPKKGLITWNAMISGYAQNGLASNVLELYKKMKACRNCADAVTFVG 247

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
            L SCA L     G ++   +  SG    PF+  +LI+MY +C  +  AR +F+      
Sbjct: 248 VLSSCAHLGAISVGREVEQRIEFSGLSLNPFLNNALINMYARCGNLVKARAIFD--GMLV 305

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACA 583
           +  V + A++ G+ ++     A+ LF +M + G+  +    + V+ AC+
Sbjct: 306 KSVVSWTAIIGGYGMHGYGEIAVELFDEMIKGGIRPDGAAFVSVLCACS 354


>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328573|gb|EFH58992.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 620

 Score =  338 bits (866), Expect = 2e-90
 Identities = 160/274 (58%), Positives = 212/274 (77%)
 Frame = +2

Query: 122 AATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGA 301
           +A   T WN RLRELA   LF E++ LYR MLR G  P+AF+FPF LKSCA+LSLP+SG 
Sbjct: 11  SAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQ 70

Query: 302 QLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTL 481
           QLHCH+I+ GCE EPFV+T+LISMYCKC LVE+AR+VFE++P S +L VCYNAL++G+T 
Sbjct: 71  QLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTA 130

Query: 482 NFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISV 661
           N +  DA  +F++M   GV+ +S+T+LG++P C +P ++  G ++HG  VK G   E++V
Sbjct: 131 NSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAV 190

Query: 662 LNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGV 841
           LN  +TMY++CGS    R++FDEMP K LI+WNA+ISGY+QNGLA +VL L+ +M+SSGV
Sbjct: 191 LNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGV 250

Query: 842 SPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
            PDP TLVSVLSSCAHLGA +IG+E+  LV  +G
Sbjct: 251 CPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANG 284



 Score =  143 bits (361), Expect = 9e-32
 Identities = 83/261 (31%), Positives = 131/261 (50%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +     N    +A  ++R+M   G   ++ T    +  C        G  LH   +
Sbjct: 121 YNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECV 180

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G   E  V+ S I+MY KC  VE+ R++F++ P    +T  +NA+++G++ N   YD 
Sbjct: 181 KGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLIT--WNAVISGYSQNGLAYDV 238

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + LF+QM   GV  +  T++ V+ +CA       G  V       G    + + N L++M
Sbjct: 239 LELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISM 298

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FD MP K L+SW A+I  Y  +G+    L L+ +M   G+ PD    
Sbjct: 299 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVF 358

Query: 863 VSVLSSCAHLGAHRIGREIER 925
           V VLS+C+H G    G E+ R
Sbjct: 359 VMVLSACSHSGLTDKGLELFR 379



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           + S + L  E+    +  WN+ +   ++N L  + L L+ QM   G  P+ FT    L S
Sbjct: 204 VESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSS 263

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA L     G ++   +  +G  P  F+  +LISMY +C  +  AR VF+  P   +  V
Sbjct: 264 CAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP--VKSLV 321

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            + A++  + ++      + LF  M + G+  +    + V+ AC+       G+T  G  
Sbjct: 322 SWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACS-----HSGLTDKGLE 376

Query: 629 VKRGLDVEISV------LNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAII 769
           + R +  E  +       +CL+ +  R G    A +  D MP   +   W A++
Sbjct: 377 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430


>ref|XP_006341234.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Solanum tuberosum]
          Length = 646

 Score =  319 bits (818), Expect = 9e-85
 Identities = 160/285 (56%), Positives = 207/285 (72%)
 Frame = +2

Query: 77  KRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           K  I + A S       TT TPWN+ LR L+K+  + EAL+LYRQML+ G  PNAFTFPF
Sbjct: 24  KSTIFTKASSFT----TTTATPWNTHLRNLSKHGQYNEALILYRQMLQSGATPNAFTFPF 79

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
           ALKS A+L+LPI+G QLHCH+IK GCE EPFV T+LISMYC+C L E A++VF++ PQ +
Sbjct: 80  ALKSSASLALPITGKQLHCHVIKLGCEFEPFVQTALISMYCRCKLTEFAQKVFDEMPQ-R 138

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
            LTVCYNAL++G+  N    +   LF +M   GV FN++T+LG++P C    ++  GM++
Sbjct: 139 NLTVCYNALISGYVQNGNFLNGFLLFSEMRLRGVLFNAVTVLGLVPGCTASRYLWLGMSL 198

Query: 617 HGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLA 796
           H  NVK GL  +++++NCLLTMYVRC S  LARK+FD +P K LI+WNA+ISGYAQNGLA
Sbjct: 199 HCLNVKCGLVNDLAIVNCLLTMYVRCASMELARKLFDHIPGKGLITWNAMISGYAQNGLA 258

Query: 797 TNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
             VL LY EME   V+PD VT V VLS+CA+LGA +IG E+E  +
Sbjct: 259 GEVLELYHEMELLQVNPDAVTFVGVLSACANLGAQKIGFEVEEKI 303



 Score =  137 bits (346), Expect = 5e-30
 Identities = 80/251 (31%), Positives = 131/251 (52%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +    +N  F    LL+ +M   G   NA T    +  C A      G  LHC  +
Sbjct: 144 YNALISGYVQNGNFLNGFLLFSEMRLRGVLFNAVTVLGLVPGCTASRYLWLGMSLHCLNV 203

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G   +  ++  L++MY +C+ +E AR++F+  P    +T  +NA+++G+  N    + 
Sbjct: 204 KCGLVNDLAIVNCLLTMYVRCASMELARKLFDHIPGKGLIT--WNAMISGYAQNGLAGEV 261

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+ +M    V  +++T +GV+ ACA       G  V        +   + + N L+ M
Sbjct: 262 LELYHEMELLQVNPDAVTFVGVLSACANLGAQKIGFEVEEKIRSSCMRWNVFLKNALINM 321

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FDEMP K L+SW AII GY  +GL    + L+ +M  +G+ PD    
Sbjct: 322 YARCGNLAKARIIFDEMPEKSLVSWTAIIGGYGIHGLGNIAVELFDKMIKTGIQPDGTVF 381

Query: 863 VSVLSSCAHLG 895
           VSVL++C+H+G
Sbjct: 382 VSVLNACSHVG 392



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
 Frame = +2

Query: 83  AIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFAL 262
           A +  A+ L   +    +  WN+ +   A+N L  E L LY +M      P+A TF   L
Sbjct: 225 ASMELARKLFDHIPGKGLITWNAMISGYAQNGLAGEVLELYHEMELLQVNPDAVTFVGVL 284

Query: 263 KSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRL 442
            +CA L     G ++   +  S      F+  +LI+MY +C  +  AR +F++ P+  + 
Sbjct: 285 SACANLGAQKIGFEVEEKIRSSCMRWNVFLKNALINMYARCGNLAKARIIFDEMPE--KS 342

Query: 443 TVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHG 622
            V + A++ G+ ++     A+ LF +M + G+  +    + V+ AC+   H+  G+T  G
Sbjct: 343 LVSWTAIIGGYGIHGLGNIAVELFDKMIKTGIQPDGTVFVSVLNACS---HV--GLTEKG 397

Query: 623 CN----VKR--GLDVEISVLNCLLTMYVRCGSTGLARKMFDEM 733
            N    +KR  GL       +C++ +  R G    ARK+ + M
Sbjct: 398 LNYLDLMKREYGLKPCSEHYSCVVDLLGRAGRLEEARKLIELM 440


>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
           gi|550336888|gb|EEE92945.2| hypothetical protein
           POPTR_0006s22800g [Populus trichocarpa]
          Length = 604

 Score =  318 bits (816), Expect = 1e-84
 Identities = 153/238 (64%), Positives = 189/238 (79%)
 Frame = +2

Query: 212 MLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSL 391
           MLR G  PNAFTFPFA+KSCAALSLPI+G QLHCH+ K+GC  EPFV TSLISMY KCSL
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 392 VENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVI 571
           ++NAR++F+++PQS++LTVCYN+LL+G+ LN R  D + LF +M   GV  N +TMLG++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 572 PACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELI 751
             C +P ++  GM VHG  VK GLD++ SV NCLLTMYV+ G     RK+FDEMPRK LI
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 752 SWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIER 925
           +WNA+I+GYAQNGLA NVL LY+EMES G  PDP+TLV VLSSCAHLGA  +G+E+ER
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238



 Score =  129 bits (325), Expect = 1e-27
 Identities = 78/251 (31%), Positives = 127/251 (50%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +NS L   A N   K+ ++L+ +M   G   N  T    ++ C        G  +H   +
Sbjct: 81  YNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCV 140

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G + +  V   L++MY K   ++  R++F++ P+   +T  +NA++ G+  N    + 
Sbjct: 141 KFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLIT--WNAMINGYAQNGLANNV 198

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+K+M   G   + +T++GV+ +CA    +S G  V       G      + N L+ M
Sbjct: 199 LELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNM 258

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FD MP K ++SW AII GY  +G     + L+ EM   G+ PD    
Sbjct: 259 YARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVELFDEMIRGGIKPDGTAF 318

Query: 863 VSVLSSCAHLG 895
           VSVLS+C+H G
Sbjct: 319 VSVLSACSHAG 329



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
 Frame = +2

Query: 77  KRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           K   I   + L  E+    +  WN+ +   A+N L    L LY++M   G  P+  T   
Sbjct: 160 KSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVG 219

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
            L SCA L     G ++   +   G    PF+  +L++MY +C  ++ AR +F+  P   
Sbjct: 220 VLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMP--V 277

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
           +  V + A++ G+ ++ +   A+ LF +M R G+  +    + V+ AC+     + G+  
Sbjct: 278 KSVVSWTAIIGGYGMHGQGEVAVELFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDY 337

Query: 617 HG-CNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMP-RKELISWNAII 769
            G    K GL       +C++ +  R G    AR++ + M  R +   W A++
Sbjct: 338 FGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALL 390


>ref|XP_004246502.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Solanum lycopersicum]
          Length = 643

 Score =  316 bits (809), Expect = 1e-83
 Identities = 159/285 (55%), Positives = 205/285 (71%)
 Frame = +2

Query: 77  KRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPF 256
           K  I + A S     A    TPWN+ LR L+K+  +KEAL+LYRQML+ G  PNAFTFPF
Sbjct: 21  KSTIFTKASSFTTNAA----TPWNTHLRNLSKHGQYKEALVLYRQMLQSGATPNAFTFPF 76

Query: 257 ALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSK 436
           ALKS A+LSLPI+G QLHCH+IK GCE EPFV T+L+SMYC+C L E A++VF++ PQ +
Sbjct: 77  ALKSSASLSLPITGKQLHCHVIKLGCEYEPFVQTALMSMYCRCKLTEFAQKVFDEMPQ-R 135

Query: 437 RLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTV 616
            +TVCYNAL++G+  N    +   LF +M   GV FN++T+LG++P C    ++  GM++
Sbjct: 136 NITVCYNALISGYVQNGNFLNGFLLFDEMRLRGVLFNAVTVLGLVPGCTASRYLWLGMSL 195

Query: 617 HGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLA 796
           H  NVK GL  +++V NCLLTMYVRC    LARK+FD +P K LI+WNA+ISGYAQNGLA
Sbjct: 196 HCLNVKCGLVNDLAVANCLLTMYVRCACMELARKLFDHIPEKGLITWNAMISGYAQNGLA 255

Query: 797 TNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLV 931
             VL LY EME   V+PD VT V VLS+CA+LGA +IG E+E  +
Sbjct: 256 GEVLELYHEMELLQVNPDAVTFVGVLSACANLGAQKIGFEVEEKI 300



 Score =  139 bits (351), Expect = 1e-30
 Identities = 83/251 (33%), Positives = 130/251 (51%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +    +N  F    LL+ +M   G   NA T    +  C A      G  LHC  +
Sbjct: 141 YNALISGYVQNGNFLNGFLLFDEMRLRGVLFNAVTVLGLVPGCTASRYLWLGMSLHCLNV 200

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           K G   +  V   L++MY +C+ +E AR++F+  P+   +T  +NA+++G+  N    + 
Sbjct: 201 KCGLVNDLAVANCLLTMYVRCACMELARKLFDHIPEKGLIT--WNAMISGYAQNGLAGEV 258

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+ +M    V  +++T +GV+ ACA       G  V        +   + + N L+ M
Sbjct: 259 LELYHEMELLQVNPDAVTFVGVLSACANLGAQKIGFEVEEKIRSSCMRWNVFLKNALINM 318

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG+   AR +FDEMP K L+SW AII GY  +GL    + L+ +M  SG+ PD    
Sbjct: 319 YARCGNLAKARIVFDEMPEKSLVSWTAIIGGYGIHGLGNIAVELFDKMIESGIQPDGTVF 378

Query: 863 VSVLSSCAHLG 895
           VSVLS+C+H G
Sbjct: 379 VSVLSACSHAG 389



 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 7/236 (2%)
 Frame = +2

Query: 83  AIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFAL 262
           A +  A+ L   +    +  WN+ +   A+N L  E L LY +M      P+A TF   L
Sbjct: 222 ACMELARKLFDHIPEKGLITWNAMISGYAQNGLAGEVLELYHEMELLQVNPDAVTFVGVL 281

Query: 263 KSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRL 442
            +CA L     G ++   +  S      F+  +LI+MY +C  +  AR VF++ P+  + 
Sbjct: 282 SACANLGAQKIGFEVEEKIRSSCMRWNVFLKNALINMYARCGNLAKARIVFDEMPE--KS 339

Query: 443 TVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHG 622
            V + A++ G+ ++     A+ LF +M   G+  +    + V+ AC+       G+T  G
Sbjct: 340 LVSWTAIIGGYGIHGLGNIAVELFDKMIESGIQPDGTVFVSVLSACS-----HAGLTAKG 394

Query: 623 CN----VKR--GLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRK-ELISWNAII 769
            N    +KR  GL       +C++ +  R G    ARK+ + M  K +   W A++
Sbjct: 395 LNYLDLMKREYGLKPCSEHYSCVVDLLGRAGRLEEARKLIELMEDKPDGAVWGALL 450


>gb|EPS64087.1| hypothetical protein M569_10688 [Genlisea aurea]
          Length = 628

 Score =  288 bits (736), Expect = 3e-75
 Identities = 140/260 (53%), Positives = 186/260 (71%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           WN++LREL+K     +AL+LYR+MLR    PNAFTFPF LKS +AL +PISG  +HCH++
Sbjct: 25  WNTKLRELSKQGRCAQALILYREMLRSAAAPNAFTFPFVLKSSSALEIPISGKSIHCHVV 84

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
           KSGC  EPFV T+LISMYC+     +A+++F++ P+S R TVCYNA ++G     +  +A
Sbjct: 85  KSGCRSEPFVQTALISMYCRFRSTADAQKLFDEIPKSSRPTVCYNAFISGLVHRKKLIEA 144

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L ++M  + V  N +T+LG+I  C LP H++ GM++H      GL  + +V N L +M
Sbjct: 145 LVLLREMMFNRVGINGVTILGLIVGCVLPSHLTLGMSLHSLIQTHGLITDSAVGNSLCSM 204

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y+RCGS   ARKMFDEMP K LI+WNA+I+GY+QNGL    L LYR+M SS  +PD VTL
Sbjct: 205 YLRCGSLDSARKMFDEMPLKNLITWNAMITGYSQNGLGKEALELYRKMRSSCFAPDEVTL 264

Query: 863 VSVLSSCAHLGAHRIGREIE 922
           V VLSSCA+LGA RIGREIE
Sbjct: 265 VGVLSSCANLGAQRIGREIE 284



 Score =  126 bits (317), Expect = 1e-26
 Identities = 77/256 (30%), Positives = 129/256 (50%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCHLI 322
           +N+ +  L   +   EAL+L R+M+      N  T    +  C   S    G  LH  + 
Sbjct: 128 YNAFISGLVHRKKLIEALVLLREMMFNRVGINGVTILGLIVGCVLPSHLTLGMSLHSLIQ 187

Query: 323 KSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDA 502
             G   +  V  SL SMY +C  +++AR++F++ P    +T  +NA++ G++ N    +A
Sbjct: 188 THGLITDSAVGNSLCSMYLRCGSLDSARKMFDEMPLKNLIT--WNAMITGYSQNGLGKEA 245

Query: 503 MALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEISVLNCLLTM 682
           + L+++M       + +T++GV+ +CA       G  +       G      + N L++M
Sbjct: 246 LELYRKMRSSCFAPDEVTLVGVLSSCANLGAQRIGREIEDEIENLGFGSNPFLKNSLISM 305

Query: 683 YVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESSGVSPDPVTL 862
           Y RCG    AR +FD MP K L+SW A+I+GY  +G       L+ +M ++ + PD    
Sbjct: 306 YSRCGDLERARAVFDSMPEKNLVSWTAMITGYGIHGRGETAAELFDDMVAAKIEPDGAAF 365

Query: 863 VSVLSSCAHLGAHRIG 910
           VSVL++C+H G  R G
Sbjct: 366 VSVLAACSHAGLTRKG 381



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           + SA+ +  E+    +  WN+ +   ++N L KEAL LYR+M      P+  T    L S
Sbjct: 211 LDSARKMFDEMPLKNLITWNAMITGYSQNGLGKEALELYRKMRSSCFAPDEVTLVGVLSS 270

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA L     G ++   +   G    PF+  SLISMY +C  +E AR VF+  P+     V
Sbjct: 271 CANLGAQRIGREIEDEIENLGFGSNPFLKNSLISMYSRCGDLERARAVFDSMPEKN--LV 328

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCN 628
            + A++ G+ ++ R   A  LF  M    +  +    + V+ AC+           H   
Sbjct: 329 SWTAMITGYGIHGRGETAAELFDDMVAAKIEPDGAAFVSVLAACS-----------HAGL 377

Query: 629 VKRGLDVEISV------------LNCLLTMYVRCGSTGLARKMFDEMP 736
            ++GLD   S+              C++ +  R G    A ++ + MP
Sbjct: 378 TRKGLDYFDSMERTYRLKPALEHYACVVDLLGRAGRLSDASRLIESMP 425



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
 Frame = +2

Query: 452 YNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPAC-ALPLHISFGMTVHGCN 628
           +N  L   +   RC  A+ L+++M R     N+ T   V+ +  AL + IS G ++H   
Sbjct: 25  WNTKLRELSKQGRCAQALILYREMLRSAAAPNAFTFPFVLKSSSALEIPIS-GKSIHCHV 83

Query: 629 VKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPR--KELISWNAIISGYAQNGLATN 802
           VK G   E  V   L++MY R  ST  A+K+FDE+P+  +  + +NA ISG         
Sbjct: 84  VKSGCRSEPFVQTALISMYCRFRSTADAQKLFDEIPKSSRPTVCYNAFISGLVHRKKLIE 143

Query: 803 VLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGREIERLVFCSG 943
            L L REM  + V  + VT++ ++  C       +G  +  L+   G
Sbjct: 144 ALVLLREMMFNRVGINGVTILGLIVGCVLPSHLTLGMSLHSLIQTHG 190


>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Glycine max]
          Length = 630

 Score =  280 bits (715), Expect = 8e-73
 Identities = 135/270 (50%), Positives = 196/270 (72%), Gaps = 7/270 (2%)
 Frame = +2

Query: 137 TPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCH 316
           T WN++LR+L+K R ++EAL LYR MLR    PN FTFPF LKSCA LSLP++ +QLH H
Sbjct: 20  TAWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAH 79

Query: 317 LIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCY 496
           +I++G +P+P+  +SLI+ Y KCSL  +AR+VF++ P     T+CYNA+++G++ N +  
Sbjct: 80  VIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNP---TICYNAMISGYSFNSKPL 136

Query: 497 DAMALFKQMGRD-------GVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEI 655
            A+ LF++M R+        V  N++T+L ++  C++  H++ G+ +HGC V+ G   ++
Sbjct: 137 HAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDL 196

Query: 656 SVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESS 835
           +V N L+TMYV+CG   LARK+FDEM  ++LI+WNA+ISGYAQNG A  VL +Y EM+ S
Sbjct: 197 AVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLS 256

Query: 836 GVSPDPVTLVSVLSSCAHLGAHRIGREIER 925
           GVS D VTL+ V+S+CA+LGA  IGRE+ER
Sbjct: 257 GVSADAVTLLGVMSACANLGAQGIGREVER 286



 Score =  130 bits (327), Expect = 8e-28
 Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 7/291 (2%)
 Frame = +2

Query: 65  NDMFKRAIISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPP--- 235
           N   K ++   A+ +  E+   TI  +N+ +   + N     A+ L+R+M R  +     
Sbjct: 97  NTYAKCSLHHHARKVFDEMPNPTIC-YNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDV 155

Query: 236 ----NAFTFPFALKSCAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENA 403
               NA T    +  C+  +    G  LH   ++ G   +  V  SL++MY KC  VE A
Sbjct: 156 DVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANSLVTMYVKCGEVELA 215

Query: 404 RQVFEQSPQSKRLTVCYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACA 583
           R+VF++     R  + +NA+++G+  N      + ++ +M   GV+ +++T+LGV+ ACA
Sbjct: 216 RKVFDE--MLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADAVTLLGVMSACA 273

Query: 584 LPLHISFGMTVHGCNVKRGLDVEISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNA 763
                  G  V     +RG      + N L+ MY RCG+   AR++FD    K ++SW A
Sbjct: 274 NLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVFDRSGEKSVVSWTA 333

Query: 764 IISGYAQNGLATNVLGLYREMESSGVSPDPVTLVSVLSSCAHLGAHRIGRE 916
           II GY  +G     L L+ EM  S V PD    VSVLS+C+H G    G E
Sbjct: 334 IIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLE 384


>ref|XP_007144843.1| hypothetical protein PHAVU_007G188900g [Phaseolus vulgaris]
           gi|561018033|gb|ESW16837.1| hypothetical protein
           PHAVU_007G188900g [Phaseolus vulgaris]
          Length = 626

 Score =  277 bits (709), Expect = 4e-72
 Identities = 138/281 (49%), Positives = 200/281 (71%), Gaps = 13/281 (4%)
 Frame = +2

Query: 137 TPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKSCAALSLPISGAQLHCH 316
           T WN++LR+L+K R ++EAL LYR MLR    PNAFTFPF LKSCA LSLP++ +QLH H
Sbjct: 14  TAWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNAFTFPFLLKSCAFLSLPLTVSQLHAH 73

Query: 317 LIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGFTLNFRCY 496
           +I++G +P+P+  +SLI+ Y KC L  +AR+VF++ P     T+CYNA+++G++ N    
Sbjct: 74  VIRTGSQPDPYTRSSLINTYSKCFLPHHARKVFDELPNP---TICYNAMISGYSFNSSPL 130

Query: 497 DAMALFKQMGRD---------GVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDV 649
           DA+ LF+QM R+          V+ N++T+L ++  C++  H+  G  +HGC VK G   
Sbjct: 131 DAVKLFRQMRREEEDGLDVNGDVSVNAVTLLSLVSGCSVATHLKIGSCLHGCVVKFGFVT 190

Query: 650 EISVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREME 829
           +++V N L+TMYV+CG    AR++FDEM  K+LI+WNA++SGYAQNG A +VL +Y EM+
Sbjct: 191 DLAVANSLVTMYVKCGEVEAARQVFDEMSVKDLITWNAMVSGYAQNGHARSVLEVYNEMK 250

Query: 830 SSGVSPDPVTLVSVLSSCAHLGA----HRIGREIERLVFCS 940
            +GVS D VTL+++LS+CA+LGA    H++ REIERL F S
Sbjct: 251 LNGVSADAVTLLALLSACANLGAQGIGHKVEREIERLGFGS 291



 Score =  131 bits (330), Expect = 3e-28
 Identities = 87/267 (32%), Positives = 137/267 (51%), Gaps = 9/267 (3%)
 Frame = +2

Query: 143 WNSRLRELAKNRLFKEALLLYRQMLRF--------GDPP-NAFTFPFALKSCAALSLPIS 295
           +N+ +   + N    +A+ L+RQM R         GD   NA T    +  C+  +    
Sbjct: 116 YNAMISGYSFNSSPLDAVKLFRQMRREEEDGLDVNGDVSVNAVTLLSLVSGCSVATHLKI 175

Query: 296 GAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTVCYNALLAGF 475
           G+ LH  ++K G   +  V  SL++MY KC  VE ARQVF++   S +  + +NA+++G+
Sbjct: 176 GSCLHGCVVKFGFVTDLAVANSLVTMYVKCGEVEAARQVFDE--MSVKDLITWNAMVSGY 233

Query: 476 TLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHGCNVKRGLDVEI 655
             N      + ++ +M  +GV+ +++T+L ++ ACA       G  V     + G     
Sbjct: 234 AQNGHARSVLEVYNEMKLNGVSADAVTLLALLSACANLGAQGIGHKVEREIERLGFGSNP 293

Query: 656 SVLNCLLTMYVRCGSTGLARKMFDEMPRKELISWNAIISGYAQNGLATNVLGLYREMESS 835
            + N L+ MY RCG+   AR++FD    K ++SW AII GY  +G     + L+ EM  S
Sbjct: 294 FLRNALVNMYARCGNLTQARRVFDCSGEKSVVSWTAIIGGYGIHGHGAVAIELFDEMVKS 353

Query: 836 GVSPDPVTLVSVLSSCAHLGAHRIGRE 916
           GV PD    VSVLS+C+H G    G E
Sbjct: 354 GVRPDQTVFVSVLSACSHAGLTDRGLE 380



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
 Frame = +2

Query: 89  ISSAKSLNFEVAATTITPWNSRLRELAKNRLFKEALLLYRQMLRFGDPPNAFTFPFALKS 268
           + +A+ +  E++   +  WN+ +   A+N   +  L +Y +M   G   +A T    L +
Sbjct: 208 VEAARQVFDEMSVKDLITWNAMVSGYAQNGHARSVLEVYNEMKLNGVSADAVTLLALLSA 267

Query: 269 CAALSLPISGAQLHCHLIKSGCEPEPFVITSLISMYCKCSLVENARQVFEQSPQSKRLTV 448
           CA L     G ++   + + G    PF+  +L++MY +C  +  AR+VF+ S   ++  V
Sbjct: 268 CANLGAQGIGHKVEREIERLGFGSNPFLRNALVNMYARCGNLTQARRVFDCS--GEKSVV 325

Query: 449 CYNALLAGFTLNFRCYDAMALFKQMGRDGVTFNSITMLGVIPACALPLHISFGMTVHG-- 622
            + A++ G+ ++     A+ LF +M + GV  +    + V+ AC+       G+T  G  
Sbjct: 326 SWTAIIGGYGIHGHGAVAIELFDEMVKSGVRPDQTVFVSVLSACS-----HAGLTDRGLE 380

Query: 623 ----CNVKRGLDVEISVLNCLLTMYVRCG 697
                 +K GL       +C++ +  R G
Sbjct: 381 YFEDMKMKYGLQPGPEHYSCVVDLLGRAG 409