BLASTX nr result

ID: Cocculus23_contig00030045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00030045
         (657 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19389.3| unnamed protein product [Vitis vinifera]               66   8e-09
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Popu...    60   5e-07
ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_007147943.1| hypothetical protein PHAVU_006G167600g [Phas...    59   1e-06
ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citr...    59   1e-06
ref|XP_007199919.1| hypothetical protein PRUPE_ppa006910mg [Prun...    57   5e-06

>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REG+ +DAFELLE+LRKKD  MG+KTYKTL+ GLHFLSQE
Sbjct: 326 REGKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 365


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REG+ +DAFELLE+LRKKD  MG+KTYKTL+ GLHFLSQE
Sbjct: 354 REGKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 393


>ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Populus trichocarpa]
           gi|550345772|gb|EEE81080.2| hypothetical protein
           POPTR_0002s24950g [Populus trichocarpa]
          Length = 387

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REG  D AFELLEE RKKDG MG+K YK+LL+GLHF+S++
Sbjct: 348 REGMVDKAFELLEEWRKKDGFMGEKNYKSLLNGLHFVSRQ 387


>ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Citrus sinensis]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REGR  +AF+LLEE RK+D  MGD+ YKTLL+GLHF +QE
Sbjct: 349 REGRESEAFDLLEEFRKRDVVMGDRNYKTLLNGLHFQNQE 388


>ref|XP_007147943.1| hypothetical protein PHAVU_006G167600g [Phaseolus vulgaris]
           gi|561021166|gb|ESW19937.1| hypothetical protein
           PHAVU_006G167600g [Phaseolus vulgaris]
          Length = 373

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REGR DDAFELL+E +K+D SMG+K YKTLL+ LHF  +E
Sbjct: 334 REGRVDDAFELLDECKKRDASMGEKMYKTLLEDLHFSCRE 373


>ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citrus clementina]
           gi|557539443|gb|ESR50487.1| hypothetical protein
           CICLE_v10031787mg [Citrus clementina]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           REGR  +AF+LLEE RK+D  MGD+ YKTLL+GLHF +QE
Sbjct: 349 REGRESEAFDLLEEFRKRDVVMGDRNYKTLLNGLHFQNQE 388


>ref|XP_007199919.1| hypothetical protein PRUPE_ppa006910mg [Prunus persica]
           gi|462395319|gb|EMJ01118.1| hypothetical protein
           PRUPE_ppa006910mg [Prunus persica]
          Length = 390

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = -2

Query: 656 REGRGDDAFELLEELRKKDGSMGDKTYKTLLDGLHFLSQE 537
           R+G+G +AF+LLE+ RK D  MG+KTYKTLL+ LHF++ E
Sbjct: 351 RDGKGSEAFDLLEDFRKGDSKMGEKTYKTLLNALHFVNGE 390


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