BLASTX nr result

ID: Cocculus23_contig00029294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029294
         (709 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21459.3| unnamed protein product [Vitis vinifera]               71   3e-10
ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis ...    57   2e-08
gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays]         57   2e-08

>emb|CBI21459.3| unnamed protein product [Vitis vinifera]
          Length = 79

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 34/39 (87%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +3

Query: 3   RTRTVDLLGKTDPTYYYRNS-NCFKDPTCIFFALGSFIN 116
           RTRTVDLLGKTD T YY+N  NCFKDPTCIFFALGSFIN
Sbjct: 41  RTRTVDLLGKTDQTDYYQNDLNCFKDPTCIFFALGSFIN 79


>ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis aphrodite subsp.
           formosana] gi|58802836|gb|AAW82556.1| hypothetical
           protein [Phalaenopsis aphrodite subsp. formosana]
          Length = 103

 Score = 57.4 bits (137), Expect(2) = 2e-08
 Identities = 26/30 (86%), Positives = 27/30 (90%), Gaps = 1/30 (3%)
 Frame = +3

Query: 3   RTRTVDLLGKTDPTYYYRNS-NCFKDPTCI 89
           RTRTVDLLGKT+ TYYYRN  NCFKDPTCI
Sbjct: 60  RTRTVDLLGKTEKTYYYRNDLNCFKDPTCI 89



 Score = 28.1 bits (61), Expect(2) = 2e-08
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 73  KTQHAFFLHWALSSTDITIS 132
           K      LHWALSSTD+ IS
Sbjct: 84  KDPTCILLHWALSSTDVKIS 103


>gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays]
          Length = 53

 Score = 56.6 bits (135), Expect(2) = 2e-08
 Identities = 27/31 (87%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
 Frame = +3

Query: 3   RTRTVDLLGKTDPTYYYRN-SNCFKDPTCIF 92
           R RTVDLLGKTD T YYRN SNCFKDPTCIF
Sbjct: 10  RIRTVDLLGKTDQTDYYRNDSNCFKDPTCIF 40



 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 73  KTQHAFFLHWALSSTDITIS 132
           K     FLHWALSST++ IS
Sbjct: 34  KDPTCIFLHWALSSTNVKIS 53


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