BLASTX nr result
ID: Cocculus23_contig00029294
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00029294 (709 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21459.3| unnamed protein product [Vitis vinifera] 71 3e-10 ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis ... 57 2e-08 gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays] 57 2e-08 >emb|CBI21459.3| unnamed protein product [Vitis vinifera] Length = 79 Score = 71.2 bits (173), Expect = 3e-10 Identities = 34/39 (87%), Positives = 35/39 (89%), Gaps = 1/39 (2%) Frame = +3 Query: 3 RTRTVDLLGKTDPTYYYRNS-NCFKDPTCIFFALGSFIN 116 RTRTVDLLGKTD T YY+N NCFKDPTCIFFALGSFIN Sbjct: 41 RTRTVDLLGKTDQTDYYQNDLNCFKDPTCIFFALGSFIN 79 >ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis aphrodite subsp. formosana] gi|58802836|gb|AAW82556.1| hypothetical protein [Phalaenopsis aphrodite subsp. formosana] Length = 103 Score = 57.4 bits (137), Expect(2) = 2e-08 Identities = 26/30 (86%), Positives = 27/30 (90%), Gaps = 1/30 (3%) Frame = +3 Query: 3 RTRTVDLLGKTDPTYYYRNS-NCFKDPTCI 89 RTRTVDLLGKT+ TYYYRN NCFKDPTCI Sbjct: 60 RTRTVDLLGKTEKTYYYRNDLNCFKDPTCI 89 Score = 28.1 bits (61), Expect(2) = 2e-08 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 73 KTQHAFFLHWALSSTDITIS 132 K LHWALSSTD+ IS Sbjct: 84 KDPTCILLHWALSSTDVKIS 103 >gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays] Length = 53 Score = 56.6 bits (135), Expect(2) = 2e-08 Identities = 27/31 (87%), Positives = 27/31 (87%), Gaps = 1/31 (3%) Frame = +3 Query: 3 RTRTVDLLGKTDPTYYYRN-SNCFKDPTCIF 92 R RTVDLLGKTD T YYRN SNCFKDPTCIF Sbjct: 10 RIRTVDLLGKTDQTDYYRNDSNCFKDPTCIF 40 Score = 28.5 bits (62), Expect(2) = 2e-08 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 73 KTQHAFFLHWALSSTDITIS 132 K FLHWALSST++ IS Sbjct: 34 KDPTCIFLHWALSSTNVKIS 53