BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029174
         (919 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   474   e-131
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   474   e-131
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr...   451   e-124
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   441   e-121
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]     430   e-118
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part...   422   e-115
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi...   418   e-114
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...   415   e-113
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi...   406   e-111
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...   392   e-106
gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]        391   e-106
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...   391   e-106
ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Caps...   390   e-106
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p...   389   e-106
gb|EMT16922.1| hypothetical protein F775_05289 [Aegilops tauschii]    388   e-105
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...   388   e-105
ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ...   387   e-105
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ...   386   e-105
ref|NP_200442.1| pentatricopeptide repeat-containing protein [Ar...   385   e-104

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
            [Vitis vinifera]
          Length = 576

 Score =  474 bits (1219), Expect = e-131
 Identities = 225/304 (74%), Positives = 263/304 (86%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            + +GR+IH Q I  GL SD+HVVTALIQMYS CG +S+AR+LFD +  RDV  WNAMVAG
Sbjct: 155  IHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAG 214

Query: 186  YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            YAKVG++D+AR LFE MPERNVISWTA+IAGYAQM++PNEAI +FRRMQL +VEPDEIAM
Sbjct: 215  YAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAM 274

Query: 366  LAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKH 545
            LAALSACA LGA ELGEWIH+YI+K G+ KIVPL NALIDMY K G IEKAL+VF+ M+H
Sbjct: 275  LAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH 334

Query: 546  RSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWY 725
            +SVITWT++I GLALHGLGREALEMFSCMER R+KPNE+TF+ +LSAC HVGLV+MGRWY
Sbjct: 335  KSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWY 394

Query: 726  FSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
            F  M ++Y I P+I+HYGCM+DLLGRAG LQEA ELV+ MPFEAN  IWGSLLAA+R+HG
Sbjct: 395  FKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG 454

Query: 906  DVEL 917
            D EL
Sbjct: 455  DAEL 458



 Score =  107 bits (268), Expect = 5e-21
 Identities = 67/290 (23%), Positives = 132/290 (45%), Gaps = 31/290 (10%)
 Frame = +3

Query: 129 LFDRMLTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEA 308
           +  R L +D +L +  +   + +G    +  +F      ++  +  +I   +      EA
Sbjct: 64  MLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEA 123

Query: 309 IMVFRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDM 488
           I+++ R+  +D+  D  ++   L A   L A  +G  IH      G+   + +  ALI M
Sbjct: 124 ILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQM 183

Query: 489 -------------------------------YVKSGSIEKALQVFEKMKHRSVITWTTVI 575
                                          Y K G ++ A  +FE+M  R+VI+WT VI
Sbjct: 184 YSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVI 243

Query: 576 SGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHI 755
           +G A      EA+ MF  M+   V+P+E+  +  LSAC+H+G +++G W  + +  ++ +
Sbjct: 244 AGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGL 302

Query: 756 APRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
           +  +     ++D+  + G +++ALE+ + M  + +   W S++    +HG
Sbjct: 303 SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK-SVITWTSMIDGLALHG 351


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  474 bits (1219), Expect = e-131
 Identities = 225/304 (74%), Positives = 263/304 (86%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            + +GR+IH Q I  GL SD+HVVTALIQMYS CG +S+AR+LFD +  RDV  WNAMVAG
Sbjct: 155  IHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAG 214

Query: 186  YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            YAKVG++D+AR LFE MPERNVISWTA+IAGYAQM++PNEAI +FRRMQL +VEPDEIAM
Sbjct: 215  YAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAM 274

Query: 366  LAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKH 545
            LAALSACA LGA ELGEWIH+YI+K G+ KIVPL NALIDMY K G IEKAL+VF+ M+H
Sbjct: 275  LAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH 334

Query: 546  RSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWY 725
            +SVITWT++I GLALHGLGREALEMFSCMER R+KPNE+TF+ +LSAC HVGLV+MGRWY
Sbjct: 335  KSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWY 394

Query: 726  FSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
            F  M ++Y I P+I+HYGCM+DLLGRAG LQEA ELV+ MPFEAN  IWGSLLAA+R+HG
Sbjct: 395  FKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHG 454

Query: 906  DVEL 917
            D EL
Sbjct: 455  DAEL 458



 Score =  107 bits (268), Expect = 5e-21
 Identities = 67/290 (23%), Positives = 132/290 (45%), Gaps = 31/290 (10%)
 Frame = +3

Query: 129 LFDRMLTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEA 308
           +  R L +D +L +  +   + +G    +  +F      ++  +  +I   +      EA
Sbjct: 64  MLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEA 123

Query: 309 IMVFRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDM 488
           I+++ R+  +D+  D  ++   L A   L A  +G  IH      G+   + +  ALI M
Sbjct: 124 ILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQM 183

Query: 489 -------------------------------YVKSGSIEKALQVFEKMKHRSVITWTTVI 575
                                          Y K G ++ A  +FE+M  R+VI+WT VI
Sbjct: 184 YSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVI 243

Query: 576 SGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHI 755
           +G A      EA+ MF  M+   V+P+E+  +  LSAC+H+G +++G W  + +  ++ +
Sbjct: 244 AGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGL 302

Query: 756 APRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
           +  +     ++D+  + G +++ALE+ + M  + +   W S++    +HG
Sbjct: 303 SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK-SVITWTSMIDGLALHG 351


>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            isoform X1 [Citrus sinensis]
            gi|568871598|ref|XP_006488969.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g56310-like isoform X2 [Citrus sinensis]
          Length = 564

 Score =  451 bits (1160), Expect = e-124
 Identities = 224/306 (73%), Positives = 262/306 (85%), Gaps = 2/306 (0%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTR--DVVLWNAMV 179
            +E+GREIH QT+  GLDSDVHVV ALIQMY+ C  I DARK+FD +  R  +V +WN MV
Sbjct: 149  IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 208

Query: 180  AGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            AGYAKVG++++AR LFE M E+NVISWT LIAGYAQM+QPNEAI +FRRMQ+ +V+PDEI
Sbjct: 209  AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 268

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
            AMLAALSACA LGA ELGEWIH+YIE+ G+  IVPL NALIDMY KSG I KALQVFE M
Sbjct: 269  AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 328

Query: 540  KHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGR 719
            K++SVITWTT+I+GLALHGLGREAL+MFS MERARVKPNE+TFI +LSAC HVGLV++GR
Sbjct: 329  KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 388

Query: 720  WYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRV 899
             YF+IM SRY I P+IE YGCM+DLLGRAG LQEA +L++ MPFEAN AIWGSLLAAS +
Sbjct: 389  RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 448

Query: 900  HGDVEL 917
            +GDVEL
Sbjct: 449  YGDVEL 454



 Score =  105 bits (261), Expect = 3e-20
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 33/289 (11%)
 Frame = +3

Query: 138 RMLTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMV 317
           R L ++  L +  +   + +G  D A  +F    + +V  +   I    Q + P  A+++
Sbjct: 61  RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 120

Query: 318 FRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDM--- 488
           + ++Q + + PD  +    L A   L   ELG  IH      G+   V +  ALI M   
Sbjct: 121 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 180

Query: 489 ------------------------------YVKSGSIEKALQVFEKMKHRSVITWTTVIS 578
                                         Y K G +  A  +FE M  ++VI+WTT+I+
Sbjct: 181 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 240

Query: 579 GLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHIA 758
           G A      EA+ +F  M+   VKP+E+  +  LSAC+ +G V++G W  + +  +Y + 
Sbjct: 241 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLN 299

Query: 759 PRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
             +     ++D+  ++G + +AL++ + M    +   W +++A   +HG
Sbjct: 300 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 347


>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
            gi|557548156|gb|ESR58785.1| hypothetical protein
            CICLE_v10014960mg [Citrus clementina]
          Length = 510

 Score =  451 bits (1160), Expect = e-124
 Identities = 224/306 (73%), Positives = 262/306 (85%), Gaps = 2/306 (0%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTR--DVVLWNAMV 179
            +E+GREIH QT+  GLDSDVHVV ALIQMY+ C  I DARK+FD +  R  +V +WN MV
Sbjct: 92   IELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMV 151

Query: 180  AGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            AGYAKVG++++AR LFE M E+NVISWT LIAGYAQM+QPNEAI +FRRMQ+ +V+PDEI
Sbjct: 152  AGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEI 211

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
            AMLAALSACA LGA ELGEWIH+YIE+ G+  IVPL NALIDMY KSG I KALQVFE M
Sbjct: 212  AMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENM 271

Query: 540  KHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGR 719
            K++SVITWTT+I+GLALHGLGREAL+MFS MERARVKPNE+TFI +LSAC HVGLV++GR
Sbjct: 272  KNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGR 331

Query: 720  WYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRV 899
             YF+IM SRY I P+IE YGCM+DLLGRAG LQEA +L++ MPFEAN AIWGSLLAAS +
Sbjct: 332  RYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNI 391

Query: 900  HGDVEL 917
            +GDVEL
Sbjct: 392  YGDVEL 397



 Score =  105 bits (261), Expect = 3e-20
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 33/289 (11%)
 Frame = +3

Query: 138 RMLTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMV 317
           R L ++  L +  +   + +G  D A  +F    + +V  +   I    Q + P  A+++
Sbjct: 4   RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 63

Query: 318 FRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDM--- 488
           + ++Q + + PD  +    L A   L   ELG  IH      G+   V +  ALI M   
Sbjct: 64  YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 123

Query: 489 ------------------------------YVKSGSIEKALQVFEKMKHRSVITWTTVIS 578
                                         Y K G +  A  +FE M  ++VI+WTT+I+
Sbjct: 124 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 183

Query: 579 GLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHIA 758
           G A      EA+ +F  M+   VKP+E+  +  LSAC+ +G V++G W  + +  +Y + 
Sbjct: 184 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLN 242

Query: 759 PRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
             +     ++D+  ++G + +AL++ + M    +   W +++A   +HG
Sbjct: 243 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG 290


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Cucumis sativus] gi|449493602|ref|XP_004159370.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  441 bits (1134), Expect = e-121
 Identities = 213/304 (70%), Positives = 253/304 (83%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            VE+GR+IH QT+   LD DV+V T+LIQMYS CG +SDARKLFD +  +DV LWNAMVAG
Sbjct: 138  VEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAG 197

Query: 186  YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            Y KVGE+ SAR++F  MP+RNVISWT LIAGYAQ N+P+EAI +FR+MQL +VEPDEIAM
Sbjct: 198  YVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAM 257

Query: 366  LAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKH 545
            LA LSACADLGA ELGEWIH+YIEK G+C+IV L NALIDMY KSG+I +AL+VFE MK 
Sbjct: 258  LAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQ 317

Query: 546  RSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWY 725
            +SVITW+TVI+ LALHGLG EA++MF  ME+A+V+PNEVTF+ +LSACSHVG+VD+GR+Y
Sbjct: 318  KSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYY 377

Query: 726  FSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
            F  M S Y I P+IEHYGCM+DLL RAG LQEA +L+  MPFEAN  IWGSLLAAS  H 
Sbjct: 378  FDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHR 437

Query: 906  DVEL 917
            D EL
Sbjct: 438  DAEL 441



 Score =  118 bits (295), Expect = 4e-24
 Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 31/290 (10%)
 Frame = +3

Query: 129 LFDRMLTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEA 308
           +  R L +D +  +  +     +G    A  +F      ++  +   I   ++ + P  A
Sbjct: 47  MLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINA 106

Query: 309 IMVFRRMQLADVEPDEIAMLAALSACADLGAFELGEWIH----------------DYIEK 440
           I ++ R+++  + PD  ++ + L A   L A E+G  IH                  I+ 
Sbjct: 107 IWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQM 166

Query: 441 RGMC---------------KIVPLTNALIDMYVKSGSIEKALQVFEKMKHRSVITWTTVI 575
              C               K V L NA++  YVK G ++ A +VF +M  R+VI+WTT+I
Sbjct: 167 YSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLI 226

Query: 576 SGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHI 755
           +G A      EA+E+F  M+   V+P+E+  + VLSAC+ +G +++G W  + +  ++ +
Sbjct: 227 AGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI-EKHGL 285

Query: 756 APRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
              +  Y  ++D+  ++G ++ ALE+ + M  + +   W +++AA  +HG
Sbjct: 286 CRIVSLYNALIDMYAKSGNIRRALEVFENMK-QKSVITWSTVIAALALHG 334


>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
          Length = 524

 Score =  430 bits (1106), Expect = e-118
 Identities = 208/304 (68%), Positives = 252/304 (82%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            VE+GR+IH Q ++ GLDSDV+ VTAL++MYS CG I D+R++FD M   DV LWNAMVAG
Sbjct: 114  VEVGRQIHCQALRTGLDSDVNAVTALVRMYSCCGSILDSRRMFDEMSFWDVALWNAMVAG 173

Query: 186  YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            YAK G++D+AR++FE MPERN+ISWT++IAGYAQM +P EAI++F+RM L +VEPDE+A+
Sbjct: 174  YAKAGDVDNARKVFEQMPERNLISWTSVIAGYAQMKRPEEAILLFKRMLLENVEPDEVAI 233

Query: 366  LAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKH 545
            LA LSACA LG+  LGE IH+YI+KRG  + + L NALIDMYVKSGSI KAL VFE MK 
Sbjct: 234  LALLSACAHLGSLRLGERIHNYIQKRGFSRKLRLNNALIDMYVKSGSIRKALNVFESMKE 293

Query: 546  RSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWY 725
            RSV+TWTT+++GLALHGLGREA  MFS ME A VKPN++TFI VLSAC H GLV+MGRWY
Sbjct: 294  RSVVTWTTMLAGLALHGLGREASVMFSRMESAVVKPNDITFIAVLSACRHAGLVEMGRWY 353

Query: 726  FSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
            F+ M SRY I P+IEHYGCM+DLLGR G LQEA ELV+ MPF+AN AIWGSLL AS +HG
Sbjct: 354  FNNMDSRYGIQPKIEHYGCMIDLLGRGGYLQEAWELVKAMPFKANAAIWGSLLGASNMHG 413

Query: 906  DVEL 917
            + EL
Sbjct: 414  NAEL 417



 Score =  103 bits (256), Expect = 1e-19
 Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 32/328 (9%)
 Frame = +3

Query: 18  REIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTR-DVVLWNAMVAGYAK 194
           R+ HG  I  GL +D  ++   IQ  S  G  S A  +F     R ++ L+N M+     
Sbjct: 20  RQTHGVLIPRGLRNDNLILAHFIQSCSSLGYSSYAYLVFTHHNKRHNIYLFNTMI----- 74

Query: 195 VGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAMLAA 374
                            NV+S             P+EA+ ++ ++ L  + PD       
Sbjct: 75  -----------------NVVS-------------PSEAVSLYNKLLLTGLRPDTYTFPFV 104

Query: 375 LSACADLGAFELGEWIHDYIEKRGMCK-------------------------------IV 461
           L A   L A E+G  IH    + G+                                  V
Sbjct: 105 LKAVIKLSAVEVGRQIHCQALRTGLDSDVNAVTALVRMYSCCGSILDSRRMFDEMSFWDV 164

Query: 462 PLTNALIDMYVKSGSIEKALQVFEKMKHRSVITWTTVISGLALHGLGREALEMFSCMERA 641
            L NA++  Y K+G ++ A +VFE+M  R++I+WT+VI+G A      EA+ +F  M   
Sbjct: 165 ALWNAMVAGYAKAGDVDNARKVFEQMPERNLISWTSVIAGYAQMKRPEEAILLFKRMLLE 224

Query: 642 RVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQE 821
            V+P+EV  + +LSAC+H+G + +G    + +  R   + ++     ++D+  ++G +++
Sbjct: 225 NVEPDEVAILALLSACAHLGSLRLGERIHNYIQKR-GFSRKLRLNNALIDMYVKSGSIRK 283

Query: 822 ALELVQTMPFEANEAIWGSLLAASRVHG 905
           AL + ++M  E +   W ++LA   +HG
Sbjct: 284 ALNVFESMK-ERSVVTWTTMLAGLALHG 310


>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
            gi|462403882|gb|EMJ09439.1| hypothetical protein
            PRUPE_ppa016950mg, partial [Prunus persica]
          Length = 532

 Score =  422 bits (1084), Expect = e-115
 Identities = 211/309 (68%), Positives = 247/309 (79%), Gaps = 7/309 (2%)
 Frame = +3

Query: 12   IGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLT-----RDVVLWNAM 176
            +G +IH   I IG D D  V+TALI MYS CG +SDAR LFD         RDV LWNAM
Sbjct: 117  VGAQIHCHIIGIGFDMDASVLTALIHMYSSCGCVSDARTLFDGAAAFAFAFRDVALWNAM 176

Query: 177  VAGYAKVGEMDSARELFEFMPER--NVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEP 350
            +AGYAK G++D+AR LFE MP R  NVISWTALIAGYAQ+++P+EAI VFRRMQL +V+P
Sbjct: 177  IAGYAKSGDVDNARHLFELMPPRIRNVISWTALIAGYAQVDRPHEAITVFRRMQLENVQP 236

Query: 351  DEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVF 530
            DEI+MLAALSACA LGA  LGEWIH+YIEK    K+V L NALIDMY KSG+I KALQVF
Sbjct: 237  DEISMLAALSACAHLGALHLGEWIHNYIEKHEFRKLVSLNNALIDMYAKSGNITKALQVF 296

Query: 531  EKMKHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVD 710
            E  K ++V+TWTT+I+GLALHGLGREALEMF+ MER ++KPN++TFI +LSACSH  LV+
Sbjct: 297  ENTKCKTVVTWTTMIAGLALHGLGREALEMFAQMERVKIKPNDITFIAILSACSHGRLVE 356

Query: 711  MGRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAA 890
            +G WYFSIM S+Y I P+I HYGCM+DLL RAG LQEA ELV+ MPFEAN AIWGSLLAA
Sbjct: 357  IGHWYFSIMVSKYRIKPKIVHYGCMIDLLARAGYLQEAHELVRQMPFEANAAIWGSLLAA 416

Query: 891  SRVHGDVEL 917
            S +HGD EL
Sbjct: 417  SNIHGDAEL 425


>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Fragaria vesca subsp. vesca]
          Length = 518

 Score =  418 bits (1075), Expect = e-114
 Identities = 210/306 (68%), Positives = 244/306 (79%), Gaps = 2/306 (0%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            V IGR++H  +I  GLD+ V VVTALI MYS CG + DAR+LFD    RDV LWNAM+AG
Sbjct: 106  VGIGRQVHCHSIVTGLDTHVSVVTALIHMYSSCGSVFDARRLFDGAAFRDVALWNAMIAG 165

Query: 186  YAKVGEMDSARELFEFMP--ERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            YAK+G +DSAR +FE MP    NVISWTALIAGYAQ+N+P EAIMVFRRMQL +V+PDEI
Sbjct: 166  YAKLGHVDSARHVFETMPLNNSNVISWTALIAGYAQVNRPTEAIMVFRRMQLHNVQPDEI 225

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
            AMLAALSACA LGA  LGEWIH+YI+K G  ++  L NALIDMY KSG+I KALQVF   
Sbjct: 226  AMLAALSACAQLGALRLGEWIHNYIQKHGFRELSSLNNALIDMYAKSGNIRKALQVFHST 285

Query: 540  KHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGR 719
             H++VITWTT+I+GLALHGLG +AL+MFS MERA++ PN +TFI +LSACSH  LV  G 
Sbjct: 286  NHKTVITWTTMIAGLALHGLGTQALDMFSQMERAQIAPNHITFIAILSACSHAHLVQTGL 345

Query: 720  WYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRV 899
             YF IM SRY I P+I HYGCMVDLLGRAG LQEA +LV+ MPFEAN AIWGSLLAAS +
Sbjct: 346  RYFDIMVSRYRIQPKIMHYGCMVDLLGRAGYLQEAQQLVRQMPFEANAAIWGSLLAASNI 405

Query: 900  HGDVEL 917
            HG+ EL
Sbjct: 406  HGNDEL 411



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 33/272 (12%)
 Frame = +3

Query: 189 AKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAML 368
           + +G    A  +F   P+ N+  +  +I        P++AI V+  +Q A + PD  ++ 
Sbjct: 39  SSLGFSSYACSVFTRNPQPNINLYNTMIKALP----PSDAISVYTSIQAAGLRPDTYSVP 94

Query: 369 AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMY------------------- 491
             L A   LGA  +G  +H +    G+   V +  ALI MY                   
Sbjct: 95  LVLKAVVRLGAVGIGRQVHCHSIVTGLDTHVSVVTALIHMYSSCGSVFDARRLFDGAAFR 154

Query: 492 ------------VKSGSIEKALQVFEKM--KHRSVITWTTVISGLALHGLGREALEMFSC 629
                        K G ++ A  VFE M   + +VI+WT +I+G A      EA+ +F  
Sbjct: 155 DVALWNAMIAGYAKLGHVDSARHVFETMPLNNSNVISWTALIAGYAQVNRPTEAIMVFRR 214

Query: 630 MERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAG 809
           M+   V+P+E+  +  LSAC+ +G + +G W  + +  ++           ++D+  ++G
Sbjct: 215 MQLHNVQPDEIAMLAALSACAQLGALRLGEWIHNYI-QKHGFRELSSLNNALIDMYAKSG 273

Query: 810 LLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
            +++AL++  +   +     W +++A   +HG
Sbjct: 274 NIRKALQVFHSTNHK-TVITWTTMIAGLALHG 304


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550343649|gb|EEE78954.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 543

 Score =  415 bits (1067), Expect = e-113
 Identities = 207/309 (66%), Positives = 247/309 (79%), Gaps = 5/309 (1%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSV--CGIISDARKLFD--RMLTRDVVLWNA 173
            ++ GR++H Q+I+ GL SD+HV+TA +QMYS    G I DARK+FD   M T DV LWNA
Sbjct: 129  IQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNA 188

Query: 174  MVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPD 353
            M+ GYAK G++ +AR+LFE MP+RNVISWTALI GYAQ N+P++AI +FRRMQL +VEPD
Sbjct: 189  MLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRMQLENVEPD 248

Query: 354  EIAMLAALSACADLGAFELGEWIHDYIEKRGMCKI-VPLTNALIDMYVKSGSIEKALQVF 530
            EIAML AL+ACA LGA ELGEWI  YI++ G+    +PL NALIDMY KSG I+ ALQVF
Sbjct: 249  EIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVF 308

Query: 531  EKMKHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVD 710
            E M H+++ITWTT+I+GLALHGLG EALEMFS MERARVKPN++TFI +LSACSHVGLV 
Sbjct: 309  ENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQ 368

Query: 711  MGRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAA 890
             GRWYF+ M SRY I P+IEHYGCM+DLLGRAG L+EA  L+  MPFE N  IWGSLLAA
Sbjct: 369  TGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAA 428

Query: 891  SRVHGDVEL 917
               HGD EL
Sbjct: 429  CNTHGDPEL 437


>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
            [Glycine max]
          Length = 580

 Score =  406 bits (1044), Expect = e-111
 Identities = 203/308 (65%), Positives = 244/308 (79%), Gaps = 4/308 (1%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            V +G++IH Q I  GLDS   VVT+L+QMYS C  +S ARKLFD    +   LWNAM+AG
Sbjct: 174  VHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAG 233

Query: 186  YAKVGEMDSARELFEFMPE--RNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            YAKVG M +AR LFE MPE  R+V+SWT LI+GY Q + PNEAI +FR M L +V+PDEI
Sbjct: 234  YAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEI 293

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRG--MCKIVPLTNALIDMYVKSGSIEKALQVFE 533
            A+LA LSACADLGA +LGEWIH+YIEK    + K VPL N+LIDMY KSG I KA Q+F+
Sbjct: 294  AILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQ 353

Query: 534  KMKHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDM 713
             MKH+++ITWTTVISGLALHG G+EAL++FSCME+ARVKPNEVT I VLSACSHVGLV++
Sbjct: 354  NMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVEL 413

Query: 714  GRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAAS 893
            GR  F+ M S+Y I P+IEHYGCM+DLLGRAG LQEA+ELV+ MP EAN A+WGSLL+AS
Sbjct: 414  GRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSAS 473

Query: 894  RVHGDVEL 917
              +GD  L
Sbjct: 474  NRYGDAAL 481


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  392 bits (1007), Expect = e-106
 Identities = 194/303 (64%), Positives = 241/303 (79%), Gaps = 2/303 (0%)
 Frame = +3

Query: 15   GREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDR--MLTRDVVLWNAMVAGY 188
            G + H Q I+ GL S +HV+ +LI+MYS    ISDARKLFD   +  R+V LWNAM+  Y
Sbjct: 129  GLQFHSQAIRFGLHSHLHVLVSLIRMYS-SSHISDARKLFDGIPLTARNVALWNAMLTSY 187

Query: 189  AKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAML 368
            AK+ +M +A+ LF+ MP+RN+ISWTALI+GYA +N+P++AI +FR MQL +V PDEI +L
Sbjct: 188  AKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLL 247

Query: 369  AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHR 548
            A LSACA LGA ELGEWI +YI+  G+ + VPL NALIDMY KSG+I++AL +FE MKH+
Sbjct: 248  AVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHK 307

Query: 549  SVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYF 728
            +++TWTT+I+GLALHGLG +ALEMFS MER RVKPNE+TFI VLSACSHVGLV + R +F
Sbjct: 308  TIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFF 367

Query: 729  SIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGD 908
            + M SRY I P+IEHYGCM+DLLGRAG LQEA +L+Q MPFE N AIWGSLLAAS  HGD
Sbjct: 368  TNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGD 427

Query: 909  VEL 917
              L
Sbjct: 428  AML 430


>gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
          Length = 505

 Score =  391 bits (1005), Expect = e-106
 Identities = 177/300 (59%), Positives = 236/300 (78%), Gaps = 1/300 (0%)
 Frame = +3

Query: 21  EIHGQTIKIG-LDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGYAKV 197
           ++H   ++ G + SD HV ++L+Q+Y  CG ++DAR +FD M  RDVV WN M+AGY K 
Sbjct: 98  QLHSLLLRTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKA 157

Query: 198 GEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAMLAAL 377
           G+   ARELF+ MPERNV+SWT +I GYAQM +P +A+ VFRRMQ+  +E D +A+L+ L
Sbjct: 158 GDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVL 217

Query: 378 SACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHRSVI 557
           +AC DLGA +LGEW+H ++ +RG+C+ +PL N++IDMY+K G IEKA++VFE M+ +SV+
Sbjct: 218 AACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVV 277

Query: 558 TWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIM 737
           TWTT+I+G ALHGLG +A+EMF  MER  + PN VTF+ +LSACSHVGL D+GRWYF+IM
Sbjct: 278 TWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIM 337

Query: 738 SSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGDVEL 917
            S+Y I PR+EHYGCMVDLLGRAG L+EA +LV+ MP +AN AIWG+LLAA+R HGD  L
Sbjct: 338 VSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGL 397


>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
            gi|241927367|gb|EES00512.1| hypothetical protein
            SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score =  391 bits (1005), Expect = e-106
 Identities = 178/303 (58%), Positives = 238/303 (78%), Gaps = 1/303 (0%)
 Frame = +3

Query: 12   IGREIHGQTIKIG-LDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGY 188
            +G ++H   ++ G + SD HV  +L+Q+Y  C  ++DAR +F  M  RDVV WN M+AGY
Sbjct: 96   LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155

Query: 189  AKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAML 368
             K G++  ARELF+ MPERNV+SWT +I GYAQM +P EA+ VFRRMQ+  +EPD +A+L
Sbjct: 156  VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215

Query: 369  AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHR 548
            + LSAC DLGA +LGEW+H ++ +RG+ + +PL N++IDMY+K G IEKA++VFE M+ +
Sbjct: 216  SVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK 275

Query: 549  SVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYF 728
            SV+TWTT+I+G ALHGLG +A+EMF  MER  + PN+VTF+ +LSACSHVGL D+GRWYF
Sbjct: 276  SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYF 335

Query: 729  SIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGD 908
            +IM S+Y I P++EHYGCMVDLLGRAG L+EA +LV+ MP +AN AIWG+LLAASR HGD
Sbjct: 336  NIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGD 395

Query: 909  VEL 917
             +L
Sbjct: 396  ADL 398



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
 Frame = +3

Query: 6   VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
           V++G  +H   ++ GL  ++ ++ ++I MY  CG I  A ++F+ M  + VV W  ++AG
Sbjct: 227 VDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAG 286

Query: 186 YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
           +A  G                                  +A+ +FRRM+  ++ P+++  
Sbjct: 287 FALHG-------------------------------LGLQAVEMFRRMERENMAPNDVTF 315

Query: 366 LAALSACADLGAFELGEWIHDYIEKRGMCK-IVPLTNALIDMYVKSGSIEKALQVFEKMK 542
           LA LSAC+ +G  +LG W  + +  +   K  V     ++D+  ++G +++A  + + M 
Sbjct: 316 LAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMP 375

Query: 543 HR-SVITWTTVISGLALHG---LGREAL 614
            + +   W  +++    HG   LG EAL
Sbjct: 376 LKANAAIWGALLAASRTHGDADLGEEAL 403


>ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Capsella rubella]
            gi|482548993|gb|EOA13187.1| hypothetical protein
            CARUB_v10026213mg [Capsella rubella]
          Length = 532

 Score =  390 bits (1002), Expect = e-106
 Identities = 193/303 (63%), Positives = 240/303 (79%), Gaps = 2/303 (0%)
 Frame = +3

Query: 15   GREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGYAK 194
            GR+IHGQT+  GLDS VHVVT +IQMYS CG + DARK+FD    RDV +WNA++AGY K
Sbjct: 136  GRQIHGQTVVFGLDSSVHVVTGIIQMYSSCGGLGDARKVFDETRVRDVNVWNALLAGYGK 195

Query: 195  VGEMDSARELFEFMP--ERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAML 368
            VGEMD AR L + MP   RNV+SWT +I+GYA+  +P+EAI VF+RM + +VEPDE+ +L
Sbjct: 196  VGEMDEARVLLDMMPCWIRNVVSWTCVISGYAKSRRPSEAIEVFQRMLMENVEPDEVTLL 255

Query: 369  AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHR 548
            AALSACADL + ELGE I  Y++ RGM + V L NA+IDMY KSG+I KAL+VFE++  R
Sbjct: 256  AALSACADLVSLELGERICSYVDHRGMERAVSLNNAVIDMYAKSGNITKALEVFERVNER 315

Query: 549  SVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYF 728
            +V+TWTT+I+GLA HG G EAL MF+ M +A VKPN+VTFI +LSACSHVG V +G+  F
Sbjct: 316  NVVTWTTIITGLATHGHGTEALAMFNRMVKAGVKPNDVTFIAILSACSHVGWVYLGKRLF 375

Query: 729  SIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGD 908
            S M S+Y + P IEHYGCM+DLLGRAGLL+EA E +++MPFEAN AIWGSLLAAS VH D
Sbjct: 376  SSMISKYGMQPNIEHYGCMIDLLGRAGLLREAEEAIKSMPFEANAAIWGSLLAASNVHHD 435

Query: 909  VEL 917
            +EL
Sbjct: 436  LEL 438



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 36/290 (12%)
 Frame = +3

Query: 144 LTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNE---AIM 314
           L RD ++    +   +  G +  A  +F   P  N      +I   + +++PN    A+ 
Sbjct: 44  LNRDNLIVAKFIEACSNAGHVRYAYSVFTHQPFPNTYLHNTMIRALSLVDEPNANSFAVS 103

Query: 315 VFRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYV 494
           V+R+      +PD       L     +     G  IH      G+   V +   +I MY 
Sbjct: 104 VYRKFWALCCKPDTFTFPFVLKIAVRVSDVCFGRQIHGQTVVFGLDSSVHVVTGIIQMYS 163

Query: 495 KSGSIEKALQVFEKMK---------------------------------HRSVITWTTVI 575
             G +  A +VF++ +                                  R+V++WT VI
Sbjct: 164 SCGGLGDARKVFDETRVRDVNVWNALLAGYGKVGEMDEARVLLDMMPCWIRNVVSWTCVI 223

Query: 576 SGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHI 755
           SG A      EA+E+F  M    V+P+EVT +  LSAC+ +  +++G    S +  R  +
Sbjct: 224 SGYAKSRRPSEAIEVFQRMLMENVEPDEVTLLAALSACADLVSLELGERICSYVDHR-GM 282

Query: 756 APRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
              +     ++D+  ++G + +ALE+ + +  E N   W +++     HG
Sbjct: 283 ERAVSLNNAVIDMYAKSGNITKALEVFERVN-ERNVVTWTTIITGLATHG 331



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
 Frame = +3

Query: 6   VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
           +E+G  I       G++  V +  A+I MY+  G I+ A ++F+R+  R+VV W  ++ G
Sbjct: 267 LELGERICSYVDHRGMERAVSLNNAVIDMYAKSGNITKALEVFERVNERNVVTWTTIITG 326

Query: 186 YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            A  G                                  EA+ +F RM  A V+P+++  
Sbjct: 327 LATHG-------------------------------HGTEALAMFNRMVKAGVKPNDVTF 355

Query: 366 LAALSACADLGAFELGEWI-HDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMK 542
           +A LSAC+ +G   LG+ +    I K GM   +     +ID+  ++G + +A +  + M 
Sbjct: 356 IAILSACSHVGWVYLGKRLFSSMISKYGMQPNIEHYGCMIDLLGRAGLLREAEEAIKSMP 415

Query: 543 -HRSVITWTTVISGLALH---GLGREALEMFSCME 635
              +   W ++++   +H    LG  AL     +E
Sbjct: 416 FEANAAIWGSLLAASNVHHDLELGERALNQLIKLE 450


>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            1 [Theobroma cacao] gi|590582550|ref|XP_007014655.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 1 [Theobroma cacao]
            gi|508785017|gb|EOY32273.1| Pentatricopeptide repeat
            (PPR) superfamily protein, putative isoform 1 [Theobroma
            cacao] gi|508785018|gb|EOY32274.1| Pentatricopeptide
            repeat (PPR) superfamily protein, putative isoform 1
            [Theobroma cacao]
          Length = 540

 Score =  389 bits (999), Expect = e-106
 Identities = 195/317 (61%), Positives = 246/317 (77%), Gaps = 13/317 (4%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLT-----RDVVLWN 170
            +  G +IH QT+  GL+++++V TALIQMYS C  +SDARKLFD++ +     +DV LW+
Sbjct: 117  LRFGTQIHSQTVCAGLNANIYVATALIQMYSSCACVSDARKLFDQLTSVSRSIQDVALWS 176

Query: 171  AMVAGYAKVGEMDSARELFEFMPERN------VISWTALIAGYAQMNQPNEAIMVFRRMQ 332
            A +AGYAKVG+ D+A +L E MP+        ++ WT +IAGYAQM++PNEAI VFRRMQ
Sbjct: 177  ATIAGYAKVGDPDAAWDLLERMPQTQTNAEAVMVCWTTVIAGYAQMDRPNEAIAVFRRMQ 236

Query: 333  LADVEPDEIAMLAALSACADLGA--FELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGS 506
            L +V+PDEIAMLA L+ACA LGA  F LGE IH YI K G  +++PL NALI+MY KSG 
Sbjct: 237  LENVKPDEIAMLAVLTACAHLGAIQFLLGECIHGYIHKHGFNQMIPLKNALIEMYAKSGD 296

Query: 507  IEKALQVFEKMKHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSA 686
            I KALQVFE M H++VITWTT+IS LA HGLG  AL+MFS MERA+V+PN++TF+ VLSA
Sbjct: 297  ICKALQVFENMNHKTVITWTTIISALAFHGLGTLALQMFSRMERAQVQPNDITFLAVLSA 356

Query: 687  CSHVGLVDMGRWYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEA 866
            C+H GLVD+G  +F+ MSSRY I P+I+HYGCM+DLLGRAG L+EALELV  MPF+ N A
Sbjct: 357  CTHAGLVDLGGCFFNTMSSRYGIQPKIQHYGCMIDLLGRAGYLREALELVSRMPFKPNAA 416

Query: 867  IWGSLLAASRVHGDVEL 917
            IWGSLLAAS +H + EL
Sbjct: 417  IWGSLLAASNIHANAEL 433



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
 Frame = +3

Query: 3   QVEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVA 182
           Q  +G  IHG   K G +  + +  ALI+MY+  G I  A ++F+ M  + V+ W     
Sbjct: 261 QFLLGECIHGYIHKHGFNQMIPLKNALIEMYAKSGDICKALQVFENMNHKTVITW----- 315

Query: 183 GYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIA 362
                                     T +I+  A       A+ +F RM+ A V+P++I 
Sbjct: 316 --------------------------TTIISALAFHGLGTLALQMFSRMERAQVQPNDIT 349

Query: 363 MLAALSACADLGAFELGEWIHDYIEKR-GMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
            LA LSAC   G  +LG    + +  R G+   +     +ID+  ++G + +AL++  +M
Sbjct: 350 FLAVLSACTHAGLVDLGGCFFNTMSSRYGIQPKIQHYGCMIDLLGRAGYLREALELVSRM 409

Query: 540 KHR-SVITWTTVISGLALHG---LGREAL 614
             + +   W ++++   +H    LG  AL
Sbjct: 410 PFKPNAAIWGSLLAASNIHANAELGELAL 438


>gb|EMT16922.1| hypothetical protein F775_05289 [Aegilops tauschii]
          Length = 498

 Score =  388 bits (997), Expect = e-105
 Identities = 177/303 (58%), Positives = 232/303 (76%), Gaps = 1/303 (0%)
 Frame = +3

Query: 12  IGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGYA 191
           +G ++H   ++ GL SD HV  +LIQ Y  C  ++ AR +FD  + +D+  WN  ++GYA
Sbjct: 88  LGPQLHCIVVRAGLASDAHVSASLIQAYFSCACVASARSVFDETVHKDIFCWNVTISGYA 147

Query: 192 KVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLAD-VEPDEIAML 368
           K G +D ARELF+ MP+RNV+SWT LI  YAQM +P EA+ VFRRMQ+ + +EPD IAML
Sbjct: 148 KSGNLDRARELFDAMPQRNVVSWTTLIGAYAQMKRPAEAVEVFRRMQVEEGIEPDGIAML 207

Query: 369 AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHR 548
           + LSAC DLGA +LGEW+H ++ KRG+C  +PL NA+IDMY+K G + KA++VFE M  +
Sbjct: 208 SVLSACGDLGAVDLGEWVHRFVVKRGLCWHIPLMNAIIDMYLKCGCVAKAVEVFEGMGQK 267

Query: 549 SVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYF 728
           S++TWTT+I+G ALHGLG EA++MF  MER  V PN++TF+ +LS CSH+GL D+GRWYF
Sbjct: 268 SIVTWTTLIAGFALHGLGLEAVDMFRRMERENVAPNDITFLAILSVCSHIGLTDLGRWYF 327

Query: 729 SIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGD 908
            IM S+Y I PR+EHYGCMVDLLGRAG L EA +LV+ MPF+AN AIWG+LLAA+R HGD
Sbjct: 328 QIMVSQYRIKPRVEHYGCMVDLLGRAGCLMEAQDLVKDMPFKANAAIWGALLAAARTHGD 387

Query: 909 VEL 917
            EL
Sbjct: 388 AEL 390



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
 Frame = +3

Query: 6   VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
           V++G  +H   +K GL   + ++ A+I MY  CG ++ A ++F+ M  + +V W  ++AG
Sbjct: 219 VDLGEWVHRFVVKRGLCWHIPLMNAIIDMYLKCGCVAKAVEVFEGMGQKSIVTWTTLIAG 278

Query: 186 YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
           +A  G                                  EA+ +FRRM+  +V P++I  
Sbjct: 279 FALHG-------------------------------LGLEAVDMFRRMERENVAPNDITF 307

Query: 366 LAALSACADLGAFELGEWIHDYIEKRGMCK-IVPLTNALIDMYVKSGSIEKALQVFEKMK 542
           LA LS C+ +G  +LG W    +  +   K  V     ++D+  ++G + +A  + + M 
Sbjct: 308 LAILSVCSHIGLTDLGRWYFQIMVSQYRIKPRVEHYGCMVDLLGRAGCLMEAQDLVKDMP 367

Query: 543 HR-SVITWTTVISGLALHG---LGREAL 614
            + +   W  +++    HG   LG +AL
Sbjct: 368 FKANAAIWGALLAAARTHGDAELGEQAL 395


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 500

 Score =  388 bits (997), Expect = e-105
 Identities = 180/303 (59%), Positives = 230/303 (75%), Gaps = 1/303 (0%)
 Frame = +3

Query: 12  IGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGYA 191
           +G ++H   ++ GL SD HV  +LIQ Y  CG ++ AR +FD+   +D+  WN M++GY 
Sbjct: 87  LGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYV 146

Query: 192 KVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLAD-VEPDEIAML 368
           K G +  ARELF+ MP RNV+SWT +I  YAQM QP EA+ VFRRMQ+ + +EPD +A+L
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206

Query: 369 AALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKHR 548
           + LSAC DLGA +LGEW+H ++ +RG+C  +PL NA+IDMYVK G + KA++VFE M  +
Sbjct: 207 SVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQK 266

Query: 549 SVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYF 728
           SV+TWTTVI+G ALHGLG EA+EMF  ME   V PN+VTF+ +LSACSHVGL D+GRWYF
Sbjct: 267 SVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYF 326

Query: 729 SIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHGD 908
            IM S+Y I  R+EHYGCMVDLLGRAG L EA +LVQ MPF+AN AIWG+LLAA+R HGD
Sbjct: 327 KIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGD 386

Query: 909 VEL 917
            EL
Sbjct: 387 AEL 389



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
 Frame = +3

Query: 6   VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
           V++G  +H   ++ GL   + ++ A+I MY   G +  A ++F+ M  + VV W  ++AG
Sbjct: 218 VDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAG 277

Query: 186 YAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
           +A  G                                  EAI +FRRM++ +V P+++  
Sbjct: 278 FALHG-------------------------------LGLEAIEMFRRMEMENVAPNDVTF 306

Query: 366 LAALSACADLGAFELGEWIHDYIEKRGMCK-IVPLTNALIDMYVKSGSIEKALQVFEKMK 542
           LA LSAC+ +G  +LG W    +  +   K  V     ++D+  ++G + +A  + + M 
Sbjct: 307 LAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMP 366

Query: 543 HR-SVITWTTVISGLALHG---LGREAL 614
            + +   W  +++    HG   LG++AL
Sbjct: 367 FKANAAIWGALLAAARTHGDAELGKQAL 394


>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355478874|gb|AES60077.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 526

 Score =  387 bits (993), Expect = e-105
 Identities = 199/305 (65%), Positives = 242/305 (79%), Gaps = 3/305 (0%)
 Frame = +3

Query: 12   IGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAGYA 191
            +G++IH   +  GLD +V V ++LIQMYS C  +  ARKLFD       VL NAM+  Y 
Sbjct: 130  LGKQIHCVGVVTGLDKNVSVCSSLIQMYS-CYDVCSARKLFDEFGGNGCVL-NAMIVAYV 187

Query: 192  KVGEMDSARELFEFMPERN--VISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEIAM 365
            KVG++ +AR+LF+ M ER+  V SWTA+I+GY Q + PNEAI +FRRMQL +V+PDEIA+
Sbjct: 188  KVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAI 247

Query: 366  LAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKMKH 545
            LA LSACADLGA  LGEWIH+YIEK  + KIVPL N+LIDMY KSG+I KAL++FE MKH
Sbjct: 248  LAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKH 307

Query: 546  RSVITWTTVISGLALHGLGREALEMFSCMERA-RVKPNEVTFIGVLSACSHVGLVDMGRW 722
            +++ITWTT+I+GLALHGLG+EAL +FSCME+  RVKPNEVTFI +LSACSHVGLV++GR 
Sbjct: 308  KTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRD 367

Query: 723  YFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVH 902
            YF+ M SRY I P+IEHYGCM+DLLGRAG LQEA E+V  MPFEAN AIWGSLLAAS   
Sbjct: 368  YFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRC 427

Query: 903  GDVEL 917
            GD EL
Sbjct: 428  GDAEL 432


>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297310281|gb|EFH40705.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  386 bits (992), Expect = e-105
 Identities = 188/306 (61%), Positives = 237/306 (77%), Gaps = 2/306 (0%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            V  GR++HGQ +  G DS VHVVT LIQMYS CG + DARK+FD M  RDV +WNA++AG
Sbjct: 132  VWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAG 191

Query: 186  YAKVGEMDSARELFEFMP--ERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            Y KVGEMD AR L E MP   RN +SWT +I+GYA+  + +EAI VF+RM + +V+PDE+
Sbjct: 192  YGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEV 251

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
             +LA LSACADLG+ ELGE I  Y++ RGM + V L NA+IDMY KSG+I KAL+VFE +
Sbjct: 252  TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESV 311

Query: 540  KHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGR 719
              R+V+TWTT+I+GLA HG G EAL MF  M +A VKPN+VTFI +LSACSHVG VD+G 
Sbjct: 312  NERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGN 371

Query: 720  WYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRV 899
             +F+ M S+Y I P IEHYGCM+DLLGRAG L+EA E++++MPFE+N AIWGSLLAAS V
Sbjct: 372  RFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNV 431

Query: 900  HGDVEL 917
            H D+++
Sbjct: 432  HHDIDV 437


>ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g56310 gi|10177829|dbj|BAB11258.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332009364|gb|AED96747.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  385 bits (988), Expect = e-104
 Identities = 190/306 (62%), Positives = 237/306 (77%), Gaps = 2/306 (0%)
 Frame = +3

Query: 6    VEIGREIHGQTIKIGLDSDVHVVTALIQMYSVCGIISDARKLFDRMLTRDVVLWNAMVAG 185
            V  GR+IHGQ +  G DS VHVVT LIQMY  CG + DARK+FD ML +DV +WNA++AG
Sbjct: 132  VWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG 191

Query: 186  YAKVGEMDSARELFEFMP--ERNVISWTALIAGYAQMNQPNEAIMVFRRMQLADVEPDEI 359
            Y KVGEMD AR L E MP   RN +SWT +I+GYA+  + +EAI VF+RM + +VEPDE+
Sbjct: 192  YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251

Query: 360  AMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYVKSGSIEKALQVFEKM 539
             +LA LSACADLG+ ELGE I  Y++ RGM + V L NA+IDMY KSG+I KAL VFE +
Sbjct: 252  TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311

Query: 540  KHRSVITWTTVISGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGR 719
              R+V+TWTT+I+GLA HG G EAL MF+ M +A V+PN+VTFI +LSACSHVG VD+G+
Sbjct: 312  NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371

Query: 720  WYFSIMSSRYHIAPRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRV 899
              F+ M S+Y I P IEHYGCM+DLLGRAG L+EA E++++MPF+AN AIWGSLLAAS V
Sbjct: 372  RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNV 431

Query: 900  HGDVEL 917
            H D+EL
Sbjct: 432  HHDLEL 437



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 36/290 (12%)
 Frame = +3

Query: 144 LTRDVVLWNAMVAGYAKVGEMDSARELFEFMPERNVISWTALIAGYAQMNQPNE---AIM 314
           L RD +     +   +  G +  A  +F   P  N      +I   + +++PN    AI 
Sbjct: 43  LNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAIT 102

Query: 315 VFRRMQLADVEPDEIAMLAALSACADLGAFELGEWIHDYIEKRGMCKIVPLTNALIDMYV 494
           V+R++     +PD       L     +     G  IH  +   G    V +   LI MY 
Sbjct: 103 VYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYF 162

Query: 495 KSGSIEKALQVFEKMKHRSV---------------------------------ITWTTVI 575
             G +  A ++F++M  + V                                 ++WT VI
Sbjct: 163 SCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222

Query: 576 SGLALHGLGREALEMFSCMERARVKPNEVTFIGVLSACSHVGLVDMGRWYFSIMSSRYHI 755
           SG A  G   EA+E+F  M    V+P+EVT + VLSAC+ +G +++G    S +  R  +
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GM 281

Query: 756 APRIEHYGCMVDLLGRAGLLQEALELVQTMPFEANEAIWGSLLAASRVHG 905
              +     ++D+  ++G + +AL++ + +  E N   W +++A    HG
Sbjct: 282 NRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHG 330