BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00029093
         (660 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40106.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi...   238   1e-60
ref|XP_007014404.1| Pentatricopeptide repeat superfamily protein...   236   5e-60
ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containi...   236   6e-60
ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citr...   236   6e-60
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]   228   1e-57
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,...   225   1e-56
ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Popu...   216   5e-54
ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containi...   214   3e-53
ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
gb|EYU18223.1| hypothetical protein MIMGU_mgv1a024222mg, partial...   182   6e-44
ref|XP_004955020.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps...   145   1e-32
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps...   140   4e-31
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   139   8e-31
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   139   8e-31
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...   139   1e-30
ref|XP_006476160.1| PREDICTED: putative pentatricopeptide repeat...   137   3e-30
ref|XP_004292866.1| PREDICTED: putative pentatricopeptide repeat...   137   3e-30
ref|XP_007226824.1| hypothetical protein PRUPE_ppa017604mg [Prun...   137   3e-30

>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  238 bits (607), Expect = 1e-60
 Identities = 118/218 (54%), Positives = 149/218 (68%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA + G S HA+++K G+Q D+ +SNH+LNMYAKC     A  VFDEM  +N
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG DQAG+  MA++L+S+M   PNE                  GQ++H RSL
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GY SISFVSNSLISMYM C++C DA +VF+ +   + VSYNA+I GF EN Q  RG+E
Sbjct: 129 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
            FKLM +  ++PD+F+ MGVLGIC+ T +L RG   HC
Sbjct: 189 FFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHC 226



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
 Frame = -3

Query: 646 CSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSW 467
           C+  +  K G   H   VK+       + N ++ MY++   I  A   F  +  ++++SW
Sbjct: 212 CTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISW 271

Query: 466 SAMISGCDQAGQHLMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           + +I+ C     H   L +F  M  +    P++                 +G+Q+H   +
Sbjct: 272 NTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLM 331

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           ++       V N+L++MY  C     A+ +FS    ++ VS+N +I GF  +    R +E
Sbjct: 332 RTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           +F+ M    + PD  + +G+L  C+  G + +G ++
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLY 427



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  C+ + +  +G+  HA +++     D+ + N L+NMYAKC  I  A+ +F +M H NL
Sbjct: 311 LAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNL 370

Query: 475 VSWSAMISGCDQAGQHLMALELFSRM 398
           VSW+ +I+G    G    A+ELF +M
Sbjct: 371 VSWNTIIAGFGNHGLGERAVELFEQM 396


>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  238 bits (607), Expect = 1e-60
 Identities = 118/218 (54%), Positives = 149/218 (68%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA + G S HA+++K G+Q D+ +SNH+LNMYAKC     A  VFDEM  +N
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG DQAG+  MA++L+S+M   PNE                  GQ++H RSL
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GY SISFVSNSLISMYM C++C DA +VF+ +   + VSYNA+I GF EN Q  RG+E
Sbjct: 129 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
            FKLM +  ++PD+F+ MGVLGIC+ T +L RG   HC
Sbjct: 189 FFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHC 226



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
 Frame = -3

Query: 646 CSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSW 467
           C+  +  K G   H   VK+       + N ++ MY++   I  A   F  +  ++++SW
Sbjct: 212 CTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISW 271

Query: 466 SAMISGCDQAGQHLMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           + +I+ C     H   L +F  M  +    P++                 +G+Q+H   +
Sbjct: 272 NTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLM 331

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           ++       V N+L++MY  C     A+ +FS    ++ VS+N +I GF  +    R +E
Sbjct: 332 RTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           +F+ M    + PD  + +G+L  C+  G + +G ++
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLY 427



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  C+ + +  +G+  HA +++     D+ + N L+NMYAKC  I  A+ +F +M H NL
Sbjct: 311 LAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNL 370

Query: 475 VSWSAMISGCDQAGQHLMALELFSRM 398
           VSW+ +I+G    G    A+ELF +M
Sbjct: 371 VSWNTIIAGFGNHGLGERAVELFEQM 396


>ref|XP_007014404.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508784767|gb|EOY32023.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 589

 Score =  236 bits (602), Expect = 5e-60
 Identities = 117/218 (53%), Positives = 149/218 (68%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CS  KA++ G SFHA++VK G Q D+++SNH+LNMYAKC  I  A  VFDEM  +N
Sbjct: 9   LLHHCSITKAFRSGLSFHAAVVKAGMQADVIVSNHVLNMYAKCGKISFARQVFDEMSEKN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG +QAG+   AL+L S+MR  PNE                  G+Q+H +SL
Sbjct: 69  LVSWSAMISGYEQAGETSSALDLLSQMRLAPNEYIFASAISACANLLLLVEGRQIHAQSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GYAS+SFVSNSLISMYM C  C DA +V S +   +AVSYNA+I GF EN QP +G E
Sbjct: 129 KYGYASVSFVSNSLISMYMKCGHCSDALSVHSGASEPNAVSYNALITGFVENQQPEKGFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
           VFK M +  ++PD+F+ +G+LG C++   L RG+V HC
Sbjct: 189 VFKHMHQQGLMPDRFTFVGLLGSCADLDALHRGMVLHC 226



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C+ + A   G   H   VK G      + N ++ +Y+K   I     VF+ +  ++
Sbjct: 208 LLGSCADLDALHRGMVLHCQTVKHGLDSTAFIGNVIMTLYSKFTSIQEVEKVFEFIEEKD 267

Query: 478 LVSWSAMISGCDQAGQHLMAL----ELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLH 311
            +SW+  I+ C     H  +L    E+F+     P++                 YG+Q+H
Sbjct: 268 GISWNTFIAACFHCEHHEKSLRAFREMFNEYHTRPDDFTFASVLSACAALASILYGKQIH 327

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
              +++       V N+L +MY  C     A+ VF+    ++ VS+N +I  F  +    
Sbjct: 328 AYLIRTRLNQDIGVGNALTNMYAKCGSIAYAYHVFNRMSHHNLVSWNTIIAAFGNHGLGS 387

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGI 17
           R +E+F+ M    + PD  + +G+L  C+  G + +G+
Sbjct: 388 RALELFEQMRAIGLEPDSVTFVGLLMACNHAGLVDKGL 425


>ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
          Length = 589

 Score =  236 bits (601), Expect = 6e-60
 Identities = 118/218 (54%), Positives = 148/218 (67%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA + G S HA+++KMG Q D+++SNH+LN+YAKC +++ A  VFDEM  RN
Sbjct: 9   LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGEMILARKVFDEMSERN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG  QAG+HL+ALELFS+M   PNE                  GQQ+H  SL
Sbjct: 69  LVSWSAMISGHHQAGEHLLALELFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GYASISFV NSLISMYM      DA  V+  +   + VS+NA+I GF EN QP +G E
Sbjct: 129 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
           VFKLM+R  ++PD+FS  G L ICS + DL +G++ HC
Sbjct: 189 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 226



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 4/216 (1%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  CS     + G   H   VK   + +  + N ++ +Y+K   I      F  +  ++L
Sbjct: 209 LEICSVSNDLRKGMILHCLAVKGKLESNPFVGNTIMALYSKFNLIGETEKAFRLIEGKDL 268

Query: 475 VSWSAMISGCDQAGQHLMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           +SW+  I+ C     +   L +F  M  +    P++                 +G+Q+H 
Sbjct: 269 ISWNTFIAACSHCVDYEKGLSVFKEMSNNHGERPDDFTFASILAACAGLASVQHGKQIHA 328

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             ++        V N+L++MY  C     ++ +F+     + VS+N +I   A +     
Sbjct: 329 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLYRNVVSWNTIIAAHANHGLGGS 388

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRG 20
            +++F+ M    + PD  + +G+L  C+  G +  G
Sbjct: 389 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 424



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 56/88 (63%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           +L  C+ + + ++G+  HA +++M    D+ + N L+NMYAKC  I  ++ +F+EM +RN
Sbjct: 310 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLYRN 369

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR 395
           +VSW+ +I+     G    AL+LF +M+
Sbjct: 370 VVSWNTIIAAHANHGLGGSALKLFEQMK 397


>ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citrus clementina]
           gi|557556495|gb|ESR66509.1| hypothetical protein
           CICLE_v10010390mg [Citrus clementina]
          Length = 611

 Score =  236 bits (601), Expect = 6e-60
 Identities = 118/218 (54%), Positives = 148/218 (67%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA + G S HA+++KMG Q D+++SNH+LN+YAKC +++ A  VFDEM  RN
Sbjct: 9   LLHHCSKTKALQQGISLHAAVLKMGIQPDVIVSNHVLNLYAKCGEMILARKVFDEMSERN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG  QAG+HL+ALELFS+M   PNE                  GQQ+H  SL
Sbjct: 69  LVSWSAMISGHHQAGEHLLALELFSQMHLLPNEYIFASAISACAGIQSLVKGQQIHAYSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GYASISFV NSLISMYM      DA  V+  +   + VS+NA+I GF EN QP +G E
Sbjct: 129 KFGYASISFVGNSLISMYMKVGYSSDALLVYGEAFEPNLVSFNALIAGFVENQQPEKGFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
           VFKLM+R  ++PD+FS  G L ICS + DL +G++ HC
Sbjct: 189 VFKLMLRQGLLPDRFSFAGGLEICSVSNDLRKGMILHC 226



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 4/216 (1%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  CS     + G   H   VK   + +  + N ++ +Y+K   I      F  +  ++L
Sbjct: 209 LEICSVSNDLRKGMILHCLAVKGKLESNPFVGNTIMALYSKFNLIGETEKAFRLIEGKDL 268

Query: 475 VSWSAMISGCDQAGQHLMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           +SW+  I+ C     +   L +F  M  +    P++                 +G+Q+H 
Sbjct: 269 ISWNTFIAACSHCVDYEKGLSVFKEMSNNHGERPDDFTFASILAACAGLASVQHGKQIHA 328

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             ++        V N+L++MY  C     ++ +F+     + VS+N +I   A +     
Sbjct: 329 HLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLYRNVVSWNTIIAAHANHGLGGS 388

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRG 20
            +++F+ M    + PD  + +G+L  C+  G +  G
Sbjct: 389 ALKLFEQMKATGIKPDSVTFIGLLTACNHAGLVKEG 424



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 56/88 (63%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           +L  C+ + + ++G+  HA +++M    D+ + N L+NMYAKC  I  ++ +F+EM +RN
Sbjct: 310 ILAACAGLASVQHGKQIHAHLIRMRLNQDVGVGNALVNMYAKCGLISCSYKLFNEMLYRN 369

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR 395
           +VSW+ +I+     G    AL+LF +M+
Sbjct: 370 VVSWNTIIAAHANHGLGGSALKLFEQMK 397


>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
          Length = 730

 Score =  228 bits (581), Expect = 1e-57
 Identities = 113/218 (51%), Positives = 145/218 (66%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           L + C  + A + G S HA+++K G+Q D+ +SNH+LNMYAKC     A  VFDEM  +N
Sbjct: 16  LCYGCDIVNALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 75

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG DQAG+  MA++L+S+M   PNE                  GQ++H RSL
Sbjct: 76  LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSALTQGQKIHSRSL 135

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K GY SISFVSNSLISMYM C++C DA +VF+ +   + VSYNA+I GF EN Q  RG E
Sbjct: 136 KFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGFE 195

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
            FKLM +  ++PD+F+ MGVLGIC+ T +L RG   HC
Sbjct: 196 FFKLMXQQGLIPDRFAFMGVLGICTTTENLKRGTELHC 233



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
 Frame = -3

Query: 646 CSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSW 467
           C+  +  K G   H   VK+       + N ++ MY++   I  A   F  +  ++++SW
Sbjct: 219 CTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISW 278

Query: 466 SAMISGCDQAGQHLMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           + +I+ C     H   L +F  M  +    P++                 +G+Q+H   +
Sbjct: 279 NTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLM 338

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           ++       V N+L++MY  C     A+ +FS    ++ VS+N +I GF  +    R +E
Sbjct: 339 RTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 398

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETG 35
           +F+ M    + PD  + +G+L  C+  G
Sbjct: 399 LFEQMNAIGIRPDSVTFIGLLTACNHAG 426



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/86 (37%), Positives = 51/86 (59%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  C+ + +  +G+  HA +++     D+ + N L+NMYAKC  I  A+ +F +M H NL
Sbjct: 318 LAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHNL 377

Query: 475 VSWSAMISGCDQAGQHLMALELFSRM 398
           VSW+ +I+G    G    A+ELF +M
Sbjct: 378 VSWNTIIAGFGNHGLGERAVELFEQM 403


>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 589

 Score =  225 bits (573), Expect = 1e-56
 Identities = 110/218 (50%), Positives = 143/218 (65%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH C+KIKA+ +G S HA+ +K G   DI++SNH++N+Y+KC +++ A  +FDEM  RN
Sbjct: 9   LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSA+ISG DQ GQ L+AL LFS+MR  PNE                  G Q+H +SL
Sbjct: 69  LVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQVHAQSL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K G  S+SFVSN+LISMYM C  C DA  V +     +AVSYNA+I GF EN QP +GIE
Sbjct: 129 KLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
            FK+M +    PD+F+  G+LGIC+   D  RG+  HC
Sbjct: 189 AFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHC 226



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C+    +  G   H  ++K+  +    + N ++ MY+K   I  A  VF  +  ++
Sbjct: 208 LLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKD 267

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR----FDPNEXXXXXXXXXXXXXXXXXYGQQLH 311
           L+SW+ +++ C     H  AL +F  M       P++                 +G+Q+H
Sbjct: 268 LISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIH 327

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
           G  +++       VSN+L++MY  C    +++ VF  +   + VS+N +I  F  +    
Sbjct: 328 GHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGA 387

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           R +E F+ M    + PD  + +G+L  C+  G +  G V+
Sbjct: 388 RALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVY 427



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 4/221 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           ++  C+ + A   G   HA  +K+G      +SN L++MY KC     A  V + M   N
Sbjct: 107 VISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPN 166

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            VS++A+I+G  +  Q    +E F  MR   F P+                   G QLH 
Sbjct: 167 AVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHC 226

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
           + +K      +F+ N +I+MY   +  ++A  VF   +    +S+N ++          R
Sbjct: 227 QMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHER 286

Query: 127 GIEVFKLMIRDRVV-PDQFSLMGVLGICSETGDLMRGIVFH 8
            + VF+ M+    V PD F+  GVL  C+    +  G   H
Sbjct: 287 ALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIH 327


>ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Populus trichocarpa]
           gi|550335720|gb|EEE92536.2| hypothetical protein
           POPTR_0006s07570g [Populus trichocarpa]
          Length = 583

 Score =  216 bits (550), Expect = 5e-54
 Identities = 101/218 (46%), Positives = 143/218 (65%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           L+HQCSK KA + G   HA  +K  ++ D+++SNH+LN+YAKC+ +  A  VFDEM  RN
Sbjct: 9   LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LVSWSAMISG +Q G+ ++AL LFS++   PNE                  G+Q+HG++L
Sbjct: 69  LVSWSAMISGYEQIGEPILALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQIHGQAL 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K G  S+SFVSN+LI+MYM C +C DA   ++ +   + V+YNA+I GF EN QP +G E
Sbjct: 129 KFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
           V ++M +D   PD+F+ +G+LG C+   DL RG + HC
Sbjct: 189 VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHC 226



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C+     K G+  H   +K+       + N ++ MY+K   +  A   F  +  ++
Sbjct: 208 LLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKD 267

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM----RFDPNEXXXXXXXXXXXXXXXXXYGQQLH 311
           L+SW+  IS C     H  ALE F  M    R  P+E                  G+Q+H
Sbjct: 268 LISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIH 327

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
           G  +++         N+LI+MY  C     A+ +FS  E  + VS+N MI GF  +    
Sbjct: 328 GHLIRTRLFQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGG 387

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           +  E+F  M    V PD  + +G+L   +  G +  G+V+
Sbjct: 388 KAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVY 427



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           ++  C+ +K    G+  H   +K G      +SN L+ MY KC     A   ++E    N
Sbjct: 107 VISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELN 166

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFD---PNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            V+++A+I+G  +  Q     E+   M  D   P+                   G+ LH 
Sbjct: 167 PVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHC 226

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
           +++K    S +F+ N +I+MY   +  ++A   F + E    +S+N  I   +      +
Sbjct: 227 QTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEK 286

Query: 127 GIEVFKLMIRD-RVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            +E FK M+ + RV PD+F+    L  CS    +  G   H
Sbjct: 287 ALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIH 327


>ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform 1 [Solanum lycopersicum]
           gi|460394471|ref|XP_004242826.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like isoform 2 [Solanum lycopersicum]
          Length = 590

 Score =  214 bits (544), Expect = 3e-53
 Identities = 105/217 (48%), Positives = 146/217 (67%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA+ YG S HA+ +K G Q D+L+SNH+LNMYAKC +I  A  +F+EM  RN
Sbjct: 9   LLHHCSKTKAFHYGLSLHAAAIKSGLQGDVLISNHILNMYAKCGNINFASQIFNEMSKRN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LV+WSAMI+G DQ G+HLMA+ L+S+M  +PNE                  G+Q+H +S+
Sbjct: 69  LVTWSAMIAGYDQDGKHLMAVSLYSQMPLEPNEFVLASALSSCANLLALKLGRQIHSQSI 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K G +SISFVSNSLISMYM   +C DA +VF+ + S + VSYN +I+G  E+ Q  +  E
Sbjct: 129 KLGCSSISFVSNSLISMYMKNGQCSDALSVFALTPSLTDVSYNTIIMGLVESNQREKAFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
           V++ M +  +VPD+F+ +G+LG C+   DL +G+  H
Sbjct: 189 VYRSMCQQGLVPDRFTFVGLLGTCNTAHDLGKGMQLH 225



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C+       G   H+  +K+       + N ++ MY+    +  A  +F  +  ++
Sbjct: 208 LLGTCNTAHDLGKGMQLHSQTIKLKLDGTAFIGNIIMTMYSNLNLLNEADKIFRSIKEKD 267

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM--RFD--PNEXXXXXXXXXXXXXXXXXYGQQLH 311
           ++SW+ +I+ C +   H  AL +F  M   FD  P+E                 +G+Q+H
Sbjct: 268 VISWNTLIAACSRCDDHSKALVVFREMVQYFDGGPDEFTYASLLSACAGMGSLQFGRQIH 327

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
              ++   +    V N+L++MY  C     A+  F      + VS+N++I  FA +   +
Sbjct: 328 AHLIRKSSSVDIGVVNALVNMYAKCGCIQYAYTTFRLMTFRNLVSWNSVIAAFANHGHGK 387

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           + +++FK M+ D + PD  + +G+L  C+  G +  G+ +
Sbjct: 388 KVMKLFKEMMSDGLKPDSVTFLGLLIACNHAGLVDEGLYY 427


>ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform X1 [Solanum tuberosum]
          Length = 590

 Score =  211 bits (538), Expect = 1e-52
 Identities = 104/217 (47%), Positives = 144/217 (66%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LLH CSK KA+ YG S HA+ +K G   D+L+SNH+LNMYAKC +I  A  +F+EM  RN
Sbjct: 9   LLHHCSKTKAFHYGLSLHAAAIKSGLPGDVLISNHILNMYAKCGNINFASQIFNEMSKRN 68

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSL 299
           LV+WSAMI+G DQ G+HLMA+ L+S+M  +PNE                  G+Q+H +S+
Sbjct: 69  LVTWSAMIAGYDQDGKHLMAISLYSQMPLEPNEFVLASALSSCANLLALKLGRQIHSQSI 128

Query: 298 KSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIE 119
           K G +SISFVSNSLISMYM   +C DA +VF+ + + + VSYN +I+G  E+ Q  +  E
Sbjct: 129 KLGCSSISFVSNSLISMYMKNGQCSDALSVFALTPTLTDVSYNTIIMGLVESNQREKAFE 188

Query: 118 VFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
           V+K M +  +VPD+F+ +G+LG C    DL +G+  H
Sbjct: 189 VYKSMCQQGLVPDRFTFVGLLGTCDTAHDLGKGMQLH 225



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C        G   H+  +K+       + N ++ MY+    +  A  +F  +  ++
Sbjct: 208 LLGTCDTAHDLGKGMQLHSQTIKLKLDGTAFIGNIIMTMYSNLNLLNEADKIFRSIKEKD 267

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM--RFD--PNEXXXXXXXXXXXXXXXXXYGQQLH 311
           ++SW+ +I+ C +   H  AL +F  M   FD  P+E                 +GQQ+H
Sbjct: 268 VISWNTLIAACSRCDDHSKALVVFREMVEYFDGGPDEFTYASLLSACAGMGSMQFGQQIH 327

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
              ++   +    V N+L++MY  C     A+  F    S + VS+N++I GFA +   +
Sbjct: 328 AHLIRKSSSVDIGVVNALVNMYAKCGCIQYAYTTFRLMISRNLVSWNSVIAGFANHGHGK 387

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           + I++F+ M    + PD  + +G+L  C+  G +  G+ +
Sbjct: 388 KVIKLFEEMKSVGLKPDSVTFLGLLVACNHAGLVDEGLYY 427


>gb|EYU18223.1| hypothetical protein MIMGU_mgv1a024222mg, partial [Mimulus
           guttatus]
          Length = 572

 Score =  182 bits (463), Expect = 6e-44
 Identities = 94/205 (45%), Positives = 131/205 (63%), Gaps = 4/205 (1%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           LH C+K K+++ G S HA+ +K G+  ++   NH+LN YAKC  I +A H+FDEMPHRNL
Sbjct: 21  LHHCAKTKSFRLGISLHAAAIKTGTLAEVFTGNHVLNFYAKCGCIDAARHLFDEMPHRNL 80

Query: 475 VSWSAMISGCDQAGQHLMALELFSRMR--FDPNEXXXXXXXXXXXXXXXXXYGQQLHGRS 302
           V+WSAMISG  Q+ +  + L+LFSRM+  F PNE                  G+Q+H ++
Sbjct: 81  VTWSAMISGYGQSKRPRLGLQLFSRMQTYFKPNEHVFASVLSSCSEITDLYLGRQIHAQA 140

Query: 301 LKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNS--AVSYNAMIVGFAENLQPRR 128
           LK  +A + FV NSLI MYM C  C DA ++F+ S+S+S   VSYN  I G  EN +  +
Sbjct: 141 LKLRHACVIFVLNSLILMYMKCGMCTDALSMFTDSKSDSLTLVSYNIAITGLVENKRQEK 200

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLG 53
           GIE+F+ M R  +VPD+F+  G+LG
Sbjct: 201 GIELFRSMSRLGLVPDRFTFAGLLG 225



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           +L  CS+I     G+  HA  +K+     I + N L+ MY KC     A  +F +    +
Sbjct: 120 VLSSCSEITDLYLGRQIHAQALKLRHACVIFVLNSLILMYMKCGMCTDALSMFTDSKSDS 179

Query: 478 --LVSWSAMISGCDQAGQHLMALELF---SRMRFDPNEXXXXXXXXXXXXXXXXXYGQQL 314
             LVS++  I+G  +  +    +ELF   SR+   P+                     QL
Sbjct: 180 LTLVSYNIAITGLVENKRQEKGIELFRSMSRLGLVPDRFTFAGLLGPGQPIYDLSVVMQL 239

Query: 313 HGRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQP 134
           HG+ LK G   I+F  N LI++Y + +  D+   VF + E   A+S+N  I  F      
Sbjct: 240 HGQMLKLGLDYIAFSGNILIALYSSYNLIDEPEKVFRSIEKKDAISWNTAIAAFCHCEDN 299

Query: 133 RRGIEVFKLMIRD-RVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            + +++F+ M+ D  V PD F+   VL   + TG +  G   H
Sbjct: 300 SKALDIFREMVNDHNVGPDDFTYASVLSAAARTGSMRNGKEIH 342



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
 Frame = -3

Query: 607 HASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSWSAMISGCDQAGQH 428
           H  ++K+G  +     N L+ +Y+    I     VF  +  ++ +SW+  I+       +
Sbjct: 240 HGQMLKLGLDYIAFSGNILIALYSSYNLIDEPEKVFRSIEKKDAISWNTAIAAFCHCEDN 299

Query: 427 LMALELFSRMRFD----PNEXXXXXXXXXXXXXXXXXYGQQLHGRSLKSGYASISFVSNS 260
             AL++F  M  D    P++                  G+++H R +++       V NS
Sbjct: 300 SKALDIFREMVNDHNVGPDDFTYASVLSAAARTGSMRNGKEIHARLIRTRRDYDVGVGNS 359

Query: 259 LISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEVFKLMIRDRVVPD 80
           L++MY        ++A+F   E  +  S+N++I  FA +    + I +F+ M +  + PD
Sbjct: 360 LVNMYAKNGSITSSYAIFQQMEIRNIFSWNSIIAAFANHGLAEKAIALFEEMTKTGLQPD 419

Query: 79  QFSLMGVLGICSETGDLMRG 20
             + + +L  C+ +G L  G
Sbjct: 420 SVTFLELLTACNHSGLLDAG 439


>ref|XP_004955020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Setaria italica]
          Length = 552

 Score =  164 bits (416), Expect = 2e-38
 Identities = 89/202 (44%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
 Frame = -3

Query: 607 HASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSWSAMISGCDQAGQH 428
           HA+ VK G   D+ LSNHL+  YA    + +A  VFDEMP RNLVSWSA+IS C +AG+ 
Sbjct: 25  HAAAVKAGHAADVFLSNHLIVSYAGSGLLEAARRVFDEMPRRNLVSWSALISCCARAGRP 84

Query: 427 LMALELFSRMR-FDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSLKSGYASISFVSNSLIS 251
            +ALELF+RM    PNE                  G Q+H  ++KSG+   SFVSNS++S
Sbjct: 85  ELALELFARMEGARPNEHVYASVARSCAALRALAAGAQVHAHAVKSGFLGASFVSNSIVS 144

Query: 250 MYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEVFKLMIRDRVVPDQFS 71
           MYM C   D  + VF+T    + VSYNA+I G A + +P +G+E+F+LM    + PD+FS
Sbjct: 145 MYMKCGCFDQGYDVFATLAEPTVVSYNAVISGLAASSRPEKGLEMFRLMKLRGLRPDRFS 204

Query: 70  LMGVLGICSETGDLMRGIVFHC 5
               LGIC +  +   G   HC
Sbjct: 205 YAAALGICCDLENPNIGAALHC 226



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 3/215 (1%)
 Frame = -3

Query: 646 CSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSW 467
           C  ++    G + H   +K+G      + N +L+M +K   I  A  VF  +  ++ V+W
Sbjct: 212 CCDLENPNIGAALHCDTIKIGLGVTAFVGNVILDMCSKHGTIAEAEQVFLSVEEKDAVTW 271

Query: 466 SAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSLK 296
           +   +   + G H+ AL+L   M      P+                  +G+Q+H   ++
Sbjct: 272 NTYTAAHSRRGGHMEALKLIKDMLDTNVRPDNFTHASALAACAELSLIRHGRQVHCHLIR 331

Query: 295 SGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEV 116
           S   +   V N++ISMY  C     A   F      +  S+N ++ GF++    +  +E 
Sbjct: 332 SREDADVAVGNAVISMYARCGHMVLAARAFDQLRRPNLCSWNTLVSGFSKQGHAKEAVEA 391

Query: 115 FKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           F+ M    + PD  +  G+L  C+  G + +G+ +
Sbjct: 392 FERMKEAGIAPDSVTFTGLLAACNHAGSVSQGMEY 426



 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 3/217 (1%)
 Frame = -3

Query: 646 CSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSW 467
           C+ ++A   G   HA  VK G      +SN +++MY KC      + VF  +    +VS+
Sbjct: 111 CAALRALAAGAQVHAHAVKSGFLGASFVSNSIVSMYMKCGCFDQGYDVFATLAEPTVVSY 170

Query: 466 SAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSLK 296
           +A+ISG   + +    LE+F  M+     P+                   G  LH  ++K
Sbjct: 171 NAVISGLAASSRPEKGLEMFRLMKLRGLRPDRFSYAAALGICCDLENPNIGAALHCDTIK 230

Query: 295 SGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEV 116
            G    +FV N ++ M        +A  VF + E   AV++N      +        +++
Sbjct: 231 IGLGVTAFVGNVILDMCSKHGTIAEAEQVFLSVEEKDAVTWNTYTAAHSRRGGHMEALKL 290

Query: 115 FKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHC 5
            K M+   V PD F+    L  C+E   +  G   HC
Sbjct: 291 IKDMLDTNVRPDNFTHASALAACAELSLIRHGRQVHC 327



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 26/87 (29%), Positives = 50/87 (57%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  C+++   ++G+  H  +++     D+ + N +++MYA+C  +V A   FD++   NL
Sbjct: 310 LAACAELSLIRHGRQVHCHLIRSREDADVAVGNAVISMYARCGHMVLAARAFDQLRRPNL 369

Query: 475 VSWSAMISGCDQAGQHLMALELFSRMR 395
            SW+ ++SG  + G    A+E F RM+
Sbjct: 370 CSWNTLVSGFSKQGHAKEAVEAFERMK 396


>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
           gi|482565379|gb|EOA29568.1| hypothetical protein
           CARUB_v10016279mg [Capsella rubella]
          Length = 717

 Score =  145 bits (365), Expect = 1e-32
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL +C+       G+  HA +++   + D+++ N LLNMYAKC  +  A  VFD+MPHR+
Sbjct: 75  LLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNMYAKCGSLEEARKVFDQMPHRD 134

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            V+W+ +ISG  Q G+   AL LF++M    F PNE                  G QLHG
Sbjct: 135 FVTWTTLISGYSQHGRSRDALLLFNQMVGFGFSPNEFTLSSVIKAAAAETRGCIGHQLHG 194

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             +K G+ S   V ++L+ +Y      DDA  VF   ES + VS+NA+I G A      +
Sbjct: 195 FCIKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 254

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHCW 2
            +E+F+ M+RD   P  FS   + G CS TG L +G   H +
Sbjct: 255 ALELFQHMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 296



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
 Frame = -3

Query: 619 GQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSWSAMISGCDQ 440
           G   H   +K G   ++ + + LL++Y +   +  A  VFD +  RN VSW+A+I+G  +
Sbjct: 189 GHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 248

Query: 439 AGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSLKSGYASISFV 269
                 ALELF  M    F P+                   G+ +H   +KSG   ++F 
Sbjct: 249 RCGTEKALELFQHMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 308

Query: 268 SNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEVFKLMIRDRV 89
            N+L+ MY      DDA  +F        VS+N+++  +A++      +  F+ M R  +
Sbjct: 309 GNTLLDMYAKSGSIDDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEMRRGGI 368

Query: 88  VPDQFSLMGVLGICSETGDLMRG 20
            P++ S + VL  CS +G L  G
Sbjct: 369 RPNEISFLSVLTACSHSGLLDEG 391


>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
           gi|482573205|gb|EOA37392.1| hypothetical protein
           CARUB_v10011264mg [Capsella rubella]
          Length = 811

 Score =  140 bits (353), Expect = 4e-31
 Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C      + G+  H  +VK G   D+     L NMYAKC+ +  A  VFD MP R+
Sbjct: 143 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 202

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           LVSW+ M++G  Q G   MALE+ +RM      P+                   G+++HG
Sbjct: 203 LVSWNTMVAGYSQNGMARMALEMVNRMCEENLKPSFITIVSVLPAVSALGSMSIGKEIHG 262

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
            +L++G+ S+  +S SL+ MY  C     A  +F      + VS+N+MI  + +N  P+ 
Sbjct: 263 YALRAGFDSLVNISTSLVDMYAKCGSLKTARQLFDGMLERNVVSWNSMIDAYVQNENPKE 322

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            + +F+ M+ D V P   S+MG L  C++ GDL RG   H
Sbjct: 323 AMVIFQKMLDDGVKPTDVSVMGALHACADLGDLERGRFIH 362



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           LH C+ +   + G+  H    ++    ++ + N L++MY KC+++  A  +F ++  R L
Sbjct: 346 LHACADLGDLERGRFIHKLSTELDLDRNVSVVNSLISMYCKCKEVNIAASIFGKLQTRTL 405

Query: 475 VSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHGR 305
           VSW+AMI G  Q G+ + AL  FS+MR     P+                    + +HG 
Sbjct: 406 VSWNAMILGFAQNGRPIEALNYFSQMRTQTVKPDTFTYVSVITAIAELSVTHQAKWIHGV 465

Query: 304 SLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRG 125
            +++      FV+ +L+ MY  C     A  +F         ++NAMI G+  +   +  
Sbjct: 466 VMRNCLDKNVFVTTALVDMYAKCGAIITARLIFDLMSERHVTTWNAMIDGYGTHGIGKAA 525

Query: 124 IEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
           +E+F+ M +  V P+  + + V+  CS +G +  G+ +
Sbjct: 526 LELFEEMQKCTVKPNGVTFLSVISACSHSGLVEAGLKY 563



 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL +CS +K  ++       + K G   + L    L++++ +   +V A  VF+ +  + 
Sbjct: 45  LLERCSSLKDLRH---ILPLVFKNGLYQEHLFQTKLVSLFCRYGSVVEAARVFEPIDDKL 101

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFD---PNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            V +  M+ G  +      AL  F RMR+D   P                    G+++HG
Sbjct: 102 DVLYHTMLKGYAKVSDLDKALNFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 161

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             +KSG++   F    L +MY  C +  +A  VF        VS+N M+ G+++N   R 
Sbjct: 162 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTMVAGYSQNGMARM 221

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            +E+   M  + + P   +++ VL   S  G +  G   H
Sbjct: 222 ALEMVNRMCEENLKPSFITIVSVLPAVSALGSMSIGKEIH 261


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  139 bits (350), Expect = 8e-31
 Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           +L  C+ +     G+  HA +++ G + D+ + N L+ MY KC DI +A  +FD+MP R+
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            +SW+AMISG  + G  L  LELFS MR    DP+                   G+ +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             +KS +     ++NSLI MY +  R ++A  VFS  ES   VS+ AMI     +  P +
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            +E +K+M  + ++PD+ +L+ VL  C+  G L  GI  H
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423



 Score =  102 bits (255), Expect = 8e-20
 Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
 Frame = -3

Query: 658  LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
            +L  C+ I     G   H   +K G    +++SN L++MY+KC+ + +A  VF  +  +N
Sbjct: 406  VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465

Query: 478  LVSWSAMISGCDQAGQHLMALELFSRMR--FDPNEXXXXXXXXXXXXXXXXXYGQQLHGR 305
            +VSW+++I G     +   AL  F +M+    PN                   G+++H  
Sbjct: 466  VVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAH 525

Query: 304  SLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRG 125
            +L++G     F+ N+++ MY+ C R   A   F+ S+     ++N ++ G+A+  Q +  
Sbjct: 526  ALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLA 584

Query: 124  IEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
            +E+F  M+   + PD+ + + +L  CS++G +  G+ +
Sbjct: 585  VELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEY 622



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C   +A   G   +  +    S   + L N LL+M+ +  +++ A +VF +M  R+
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           + SW+ ++ G  +AG    AL L+ RM      PN                   G+++H 
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             ++ G+ S   V N+LI+MY+ C    +A  +F        +S+NAMI G+ EN     
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGIC 47
           G+E+F +M    V PD  ++  V   C
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASAC 309


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  139 bits (350), Expect = 8e-31
 Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           +L  C+ +     G+  HA +++ G + D+ + N L+ MY KC DI +A  +FD+MP R+
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            +SW+AMISG  + G  L  LELFS MR    DP+                   G+ +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             +KS +     ++NSLI MY +  R ++A  VFS  ES   VS+ AMI     +  P +
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            +E +K+M  + ++PD+ +L+ VL  C+  G L  GI  H
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423



 Score =  102 bits (255), Expect = 8e-20
 Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
 Frame = -3

Query: 658  LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
            +L  C+ I     G   H   +K G    +++SN L++MY+KC+ + +A  VF  +  +N
Sbjct: 406  VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465

Query: 478  LVSWSAMISGCDQAGQHLMALELFSRMR--FDPNEXXXXXXXXXXXXXXXXXYGQQLHGR 305
            +VSW+++I G     +   AL  F +M+    PN                   G+++H  
Sbjct: 466  VVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAH 525

Query: 304  SLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRG 125
            +L++G     F+ N+++ MY+ C R   A   F+ S+     ++N ++ G+A+  Q +  
Sbjct: 526  ALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLA 584

Query: 124  IEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVF 11
            +E+F  M+   + PD+ + + +L  CS++G +  G+ +
Sbjct: 585  VELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEY 622



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  C   +A   G   +  +    S   + L N LL+M+ +  +++ A +VF +M  R+
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           + SW+ ++ G  +AG    AL L+ RM      PN                   G+++H 
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             ++ G+ S   V N+LI+MY+ C    +A  +F        +S+NAMI G+ EN     
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGIC 47
           G+E+F +M    V PD  ++  V   C
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASAC 309


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331463|gb|EFH61882.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  139 bits (349), Expect = 1e-30
 Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL +C+  K    G+  H  +++   + D++++N LLNMYAKC  +  A  VFD+MP R+
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
            V+W+ +ISG  Q  +   AL LF++M    F PNE                  G QLHG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
             +K G+ S   V ++L+ +Y      DDA  VF   ES + VS+NA+I G A      +
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 236

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHCW 2
            +E+F+ M+R+   P  FS   + G CS TG L +G   H +
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 278



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
 Frame = -3

Query: 619 GQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSWSAMISGCDQ 440
           G   H   VK G   ++ + + LL++Y +   +  A  VFD +  RN VSW+A+I+G  +
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230

Query: 439 AGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLHGRSLKSGYASISFV 269
                 ALELF  M    F P+                   G+ +H   +KSG   ++F 
Sbjct: 231 RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 290

Query: 268 SNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEVFKLMIRDRV 89
            N+L+ MY       DA  +F        VS+N+++  +A++      +  F+ M R  +
Sbjct: 291 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGI 350

Query: 88  VPDQFSLMGVLGICSETG---------DLMR--GIVFHCW 2
            P++ S + VL  CS +G         +LM+  GIV   W
Sbjct: 351 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAW 390


>ref|XP_006476160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Citrus sinensis]
          Length = 694

 Score =  137 bits (345), Expect = 3e-30
 Identities = 76/219 (34%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNL 476
           L  CSK     YG   H ++VKMG  FD++L+N L++MYAKC ++  A  VFD+M  RN+
Sbjct: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78

Query: 475 VSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHGR 305
           VSW+A++ G  Q G     L LF +M      PNE                  G Q+HG 
Sbjct: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138

Query: 304 SLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRG 125
            +KSG+     V NS+I MY  C R ++A  +F    + S +++NAMI G+       +G
Sbjct: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198

Query: 124 IEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
           + +F+ M     +PD+F+    L  C   G +  G   H
Sbjct: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 57/217 (26%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
 Frame = -3

Query: 637 IKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRNLVSWSAM 458
           + + + G   H   +K G +++ ++ N +++MY+KC  I  A  +FD MP ++L++W+AM
Sbjct: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185

Query: 457 ISGCDQAGQHLMALELFSRMRFD---PNEXXXXXXXXXXXXXXXXXYGQQLHGRSLKSG- 290
           I+G   AG     L LF +M+     P+E                  G Q+HG  + SG 
Sbjct: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245

Query: 289 -YASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRRGIEVF 113
            Y+  + ++ SL+  Y+ C    +A  VF   E  S +S++++I+G+A+       +E+F
Sbjct: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305

Query: 112 KLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFHCW 2
           + +    +  D F L  ++G+ ++   + +G   H +
Sbjct: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDI--LLSNHLLNMYAKCQDIVSAHHVFDEMPHR 482
           L  C  + +   G   H  ++  G  + +  +++  L++ Y KC  +V A  VFD +  +
Sbjct: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280

Query: 481 NLVSWSAMISGCDQAGQHLMALELFSRMR---FDPNEXXXXXXXXXXXXXXXXXYGQQLH 311
           +++SWS++I G  Q      A+ELF ++R      +                   G+Q+H
Sbjct: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340

Query: 310 GRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPR 131
             + K      + VSNS++ MY+ C   D+A  +F+     + V++  +I G+ ++   +
Sbjct: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400

Query: 130 RGIEVFKLMIRDRVVPDQFSLMGVLGICSETG 35
             + +F+ M+ D V PD  + + VL  CS +G
Sbjct: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432


>ref|XP_004292866.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Fragaria vesca subsp. vesca]
          Length = 686

 Score =  137 bits (345), Expect = 3e-30
 Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  CSK      G   H  +++MG  FD++L+N L++MY+KC  I +A  +FD MP RN
Sbjct: 10  LLRNCSKNLLLDKGLQAHGFVMRMGLGFDLMLNNDLIDMYSKCGRIGNAREMFDRMPERN 69

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRMRFD---PNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           +VSW+A++ G   +G     L LFS M F    PNE                  G Q+HG
Sbjct: 70  VVSWTALMCGYLNSGNAKGCLSLFSEMGFSGIKPNEYTFSTNLKASGMLGIAENGMQIHG 129

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
              KSG+  ++ VSN+++ MY+ C R  +A  +F    + + +++NAMI G+        
Sbjct: 130 MCAKSGHEWVAVVSNAILDMYVKCGRVGEASRMFGVMPAKNVITWNAMIAGYTVEGNGEG 189

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            + +F+ M     VPD++++   L  CS  G + +G   H
Sbjct: 190 ALVLFRKMQELGEVPDEYTITSTLKACSGLGAIRQGSQIH 229



 Score =  105 bits (261), Expect = 2e-20
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDI--LLSNHLLNMYAKCQDIVSAHHVFDEMPHR 482
           L  CS + A + G   H++++  G    +   ++  L++MY KC+ +  A  VFD++  +
Sbjct: 213 LKACSGLGAIRQGSQIHSALITRGFLCSVRMTIAGALVDMYVKCRHLTEAQRVFDQVEQK 272

Query: 481 NLVSWSAMISGCDQAGQHLMALELFSRMRFDP----NEXXXXXXXXXXXXXXXXXYGQQL 314
           NL+SWSA+I G  Q      A++LF ++R  P    +                   G+Q+
Sbjct: 273 NLISWSALILGYAQECNLTQAMDLFGKLRASPCHKVDGFVLSSLMGVFADFALVEQGRQM 332

Query: 313 HGRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQP 134
           H  + K    S   V NS++ MY+ C   D+A  +F+ +   + +S+  MI G+ ++   
Sbjct: 333 HAFTTKIPSGSDISVFNSILDMYLKCGLTDEAERLFNETPLRNVISWTIMITGYGKHGLG 392

Query: 133 RRGIEVFKLMIRDRVVPDQFSLMGVLGICSETG 35
           ++ + +F  M  + + PD  S + VL  CS +G
Sbjct: 393 KKAMHLFNQMQLEEIEPDGVSYLAVLSACSHSG 425


>ref|XP_007226824.1| hypothetical protein PRUPE_ppa017604mg [Prunus persica]
           gi|462423760|gb|EMJ28023.1| hypothetical protein
           PRUPE_ppa017604mg [Prunus persica]
          Length = 686

 Score =  137 bits (345), Expect = 3e-30
 Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
 Frame = -3

Query: 658 LLHQCSKIKAYKYGQSFHASIVKMGSQFDILLSNHLLNMYAKCQDIVSAHHVFDEMPHRN 479
           LL  CSK      G   H +++KMG  FD++LSN L++MY KC     A  VFD MP RN
Sbjct: 10  LLRNCSKNLLLDQGMQAHGTVMKMGLGFDLMLSNDLIDMYGKCGRTGMACAVFDRMPERN 69

Query: 478 LVSWSAMISGCDQAGQHLMALELFSRM---RFDPNEXXXXXXXXXXXXXXXXXYGQQLHG 308
           +VSW+A++ G  Q G    +L LFS+M      PNE                  G Q+H 
Sbjct: 70  VVSWTALMCGYLQNGNAKGSLSLFSKMGLSEIKPNEFTFSINLKASGFVGVAENGMQIHN 129

Query: 307 RSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQPRR 128
              KSG+  ++ VSNS++ MY  C R  +A  +F+     + +++NAMI G+       R
Sbjct: 130 MCTKSGFEWVTVVSNSILDMYTKCGRVSEAARMFNVMPVKNLITWNAMIAGYTLEGNGER 189

Query: 127 GIEVFKLMIRDRVVPDQFSLMGVLGICSETGDLMRGIVFH 8
            + +F+ M     VPD++++   L  CS  G + +G   H
Sbjct: 190 ALLLFRQMQGMGEVPDEYTITSTLKACSGLGAIRQGSQIH 229



 Score =  105 bits (261), Expect = 2e-20
 Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
 Frame = -3

Query: 655 LHQCSKIKAYKYGQSFHASIVKMGSQFDI--LLSNHLLNMYAKCQDIVSAHHVFDEMPHR 482
           L  CS + A + G   H+S++  G    +  +++  L+++Y KC  +  A  +FD++  +
Sbjct: 213 LKACSGLGAIRQGSQIHSSLITRGFSCSVRTMIAGALVDLYVKCSHLTEAQRIFDQIEQK 272

Query: 481 NLVSWSAMISGCDQAGQHLMALELFSRMRFDPNEXXXXXXXXXXXXXXXXXY----GQQL 314
           NLVSWSA+I G  Q    L A++LF ++R   +                       G+Q+
Sbjct: 273 NLVSWSALILGYAQECNLLQAMDLFRQLRVSIHHQVDGFVLSSLMGVFADFALVEQGKQM 332

Query: 313 HGRSLKSGYASISFVSNSLISMYMNCSRCDDAFAVFSTSESNSAVSYNAMIVGFAENLQP 134
           H  ++K        V+NS++ MY+ C   D+A  +F+ +   + +S+  MI G+ ++   
Sbjct: 333 HAFTIKIPSGLDISVTNSILDMYLKCGLTDEAEKLFNETPVRNVISWTIMITGYGKHGLG 392

Query: 133 RRGIEVFKLMIRDRVVPDQFSLMGVLGICSETG 35
           R+ + +F  M  + + PD  + + VL  CS +G
Sbjct: 393 RKSVRLFHQMQSEDIEPDGVTYLAVLSACSHSG 425