BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028307
         (388 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      47   1e-08
gb|ABA27027.1| TO70-3 [Taraxacum officinale]                           51   3e-07
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]               41   1e-06
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              39   4e-06
ref|XP_005315177.1| PREDICTED: uncharacterized protein LOC101933...    42   5e-06

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 47.0 bits (110), Expect(2) = 1e-08
 Identities = 20/49 (40%), Positives = 33/49 (67%)
 Frame = +3

Query: 21   QWRIIKCHNRKVRLRGIKVGDWVQKKVLSNDKGPIHGRLRSNWEGSFCV 167
            Q R+ + +N +V  R ++VGD V +K  + +KG IHG++ +NWEG + V
Sbjct: 1226 QNRMRRAYNHRVHKRDLRVGDLVLRKSTATNKGNIHGKMTTNWEGPYKV 1274



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +1

Query: 160  FVLTKKIRPGTYRLQDRKGRQLPRSRNTNHLKKYYI 267
            + + +++RPGTYRL D +G  L    NT++L+KY+I
Sbjct: 1272 YKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYFI 1307


>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
          Length = 97

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = +3

Query: 3   LIVA*SQWRIIKCHNRKVRLRGIKVGDWVQKKVLSNDKGPIHGRLRSNWEGSFCVNQK 176
           L +A  Q RI   +N+ +R+R  ++GD V +K   N K P  G+L   WEG + +N K
Sbjct: 15  LRIAAHQQRIANSYNKNIRIRRFQIGDLVLRKTFQNTKDPADGKLAPKWEGPYVINSK 72



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 160 FVLTKKIRPGTYRLQDRKGRQLPRSRNTNHL 252
           +V+  K   G Y L D +G  LPRS N  HL
Sbjct: 67  YVINSKAGKGVYWLADMEGTLLPRSWNAIHL 97


>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
          Length = 755

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 160 FVLTKKIRPGTYRLQDRKGRQLPRSRNTNHLKKYY 264
           ++++K +RP  Y L D  G+ +PRS N  HL+KYY
Sbjct: 720 YLISKIVRPEVYELADLSGKAVPRSWNAMHLRKYY 754



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 42  HNRKVRLRGIKVGDWVQKKVLSNDKGPIHGRLRSNWEGSFCVNQ 173
           +N  VR R    GD V +KV  N   P  G+L +NWEG + +++
Sbjct: 681 YNSNVRQRRFHEGDRVLQKVFQNTAEPNTGKLGTNWEGPYLISK 724


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +3

Query: 36   KCHNRKVRLRGIKVGDWVQKKVLSNDKGPIHGRLRSNWEGSFCVNQ 173
            K +N+KV  R   VGD V +KV  N      G+L +NWEGS+ V++
Sbjct: 1762 KHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSK 1807



 Score = 37.4 bits (85), Expect(2) = 4e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 160  FVLTKKIRPGTYRLQDRKGRQLPRSRNTNHLKKYY 264
            + ++K +RPG Y L    G  +PR+ N+ HLK+YY
Sbjct: 1803 YQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837


>ref|XP_005315177.1| PREDICTED: uncharacterized protein LOC101933223 [Chrysemys picta
            bellii]
          Length = 1317

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 15/36 (41%), Positives = 26/36 (72%)
 Frame = +1

Query: 160  FVLTKKIRPGTYRLQDRKGRQLPRSRNTNHLKKYYI 267
            F++    RPG+YRL+D  G ++PRS N + L+++Y+
Sbjct: 1282 FLVASSSRPGSYRLKDMDGNEIPRSWNADELRRFYV 1317



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +3

Query: 21   QWRIIKCHNRKVRLRGIKVGDWVQKKVLSNDKGPIHGRLRSNWEGSFCV 167
            Q   +K  +RKVRL+ I+ G  V ++V + D     G+L+  WEG F V
Sbjct: 1239 QAETVKWRDRKVRLKNIEPGHLVLRRVANPDTV---GKLQLKWEGPFLV 1284