BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028275
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    83   5e-14
ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    81   2e-13
ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    80   2e-13
ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidop...    79   9e-13
ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutr...    74   2e-11

>ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like [Cucumis sativus]
          Length = 386

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +2

Query: 74  VTREERSNGKA-RPYARLAPRGV*-LTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 247
           +TREERSNGKA RP+   + R +  +  K LIGERG AHEAPAEREGLPGRMPMGAGFFE
Sbjct: 300 LTREERSNGKAIRPFG--SSRSIAHIQXKDLIGERGKAHEAPAEREGLPGRMPMGAGFFE 357

Query: 248 KRGLTRRPGTLA*QRMKGSS 307
           K         L   R +GSS
Sbjct: 358 KARADSETWDLGLGRNEGSS 377


>ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like, partial [Solanum lycopersicum]
          Length = 366

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/61 (68%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  VTREERSNG--KARPYARLAPRGV*LTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 247
           +TRE+RSNG    RP+   + R +     HLIGERGNAHEAPAEREGLPGRMPMGAGFFE
Sbjct: 280 LTREKRSNGGKAIRPFG--SSRSIAHIQXHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 337

Query: 248 K 250
           K
Sbjct: 338 K 338



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/68 (54%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +1

Query: 103 GKAIRPFGSSRSIAHIQTSDWGTGQRP*SSGGK--GRPARPYAHGCRILRKARADSETWD 276
           GKAIRPFGSSRSIAHIQ    G       +  +  G P R    G     KARADSETWD
Sbjct: 289 GKAIRPFGSSRSIAHIQXHLIGERGNAHEAPAEREGLPGR-MPMGAGFFEKARADSETWD 347

Query: 277 LGLATNEG 300
            GL  NEG
Sbjct: 348 PGLVMNEG 355


>ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  VTREERSNGKA-RPYARLAPRGV*-LTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 247
           +TREERSNGKA RP+   + R +  +  K LIGERG AHEAPAEREGLPGRMPMGAGFFE
Sbjct: 300 LTREERSNGKAIRPFG--SSRSIAHIQXKDLIGERGKAHEAPAEREGLPGRMPMGAGFFE 357

Query: 248 K 250
           K
Sbjct: 358 K 358



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +1

Query: 85  REVKWQGKAIRPFGSSRSIAHIQTSDWGTGQRP*SSGG----KGRPARPYAHGCRILRKA 252
           RE +  GKAIRPFGSSRSIAHIQ  D   G+R  +       +G P R    G     KA
Sbjct: 302 REERSNGKAIRPFGSSRSIAHIQXKDL-IGERGKAHEAPAEREGLPGR-MPMGAGFFEKA 359

Query: 253 RADSETWDLGLATNEGKL 306
           RADSETWDLGL  NEG+L
Sbjct: 360 RADSETWDLGLGRNEGEL 377


>ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidopsis thaliana]
           gi|330251006|gb|AEC06100.1| 60S ribosomal protein L2
           [Arabidopsis thaliana]
          Length = 389

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  VTREERSNGKA-RPYARLAPRGV*-LTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 247
           +TREERSNGKA RP+   + R +  +   +LIGERGN HEAP EREGLPGRMPMGAGFFE
Sbjct: 303 LTREERSNGKAIRPFG--SSRSIAHIQISYLIGERGNTHEAPTEREGLPGRMPMGAGFFE 360

Query: 248 K 250
           K
Sbjct: 361 K 361



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 43/75 (57%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = +1

Query: 85  REVKWQGKAIRPFGSSRSIAHIQTSDWGTGQRP*SSGG----KGRPARPYAHGCRILRKA 252
           RE +  GKAIRPFGSSRSIAHIQ S +  G+R  +       +G P R    G     KA
Sbjct: 305 REERSNGKAIRPFGSSRSIAHIQIS-YLIGERGNTHEAPTEREGLPGR-MPMGAGFFEKA 362

Query: 253 RADSETWDLGLATNE 297
           RADSETWDLGLATNE
Sbjct: 363 RADSETWDLGLATNE 377


>ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutrema salsugineum]
           gi|557103041|gb|ESQ43404.1| hypothetical protein
           EUTSA_v10013769mg [Eutrema salsugineum]
          Length = 389

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  VTREERSNGKA-RPYARLAPRGV*-LTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 247
           +T EERSNGKA RP+   + R +  +   +LIGERGN HEAPAEREGL GRMPMGAGFFE
Sbjct: 303 LTWEERSNGKAIRPFG--SSRSIAHIQISYLIGERGNTHEAPAEREGLQGRMPMGAGFFE 360

Query: 248 K 250
           K
Sbjct: 361 K 361



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/76 (55%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
 Frame = +1

Query: 88  EVKWQGKAIRPFGSSRSIAHIQTS-----DWGTGQRP*SSGG-KGRPARPYAHGCRILRK 249
           E +  GKAIRPFGSSRSIAHIQ S        T + P    G +GR       G     K
Sbjct: 306 EERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLQGRMPM----GAGFFEK 361

Query: 250 ARADSETWDLGLATNE 297
           ARADSETWDLGLATNE
Sbjct: 362 ARADSETWDLGLATNE 377