BLASTX nr result

ID: Cocculus23_contig00028229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00028229
         (462 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520178.1| conserved hypothetical protein [Ricinus comm...    56   6e-06
ref|XP_002312691.1| hypothetical protein POPTR_0008s19520g [Popu...    55   8e-06

>ref|XP_002520178.1| conserved hypothetical protein [Ricinus communis]
           gi|223540670|gb|EEF42233.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 103 LLFRFLQSMFRKVSKRAKKATRSMLPPAFSPQLV 2
           LLF+FLQSMF+K+SKRAKKA+RS+LP   SPQLV
Sbjct: 153 LLFKFLQSMFKKISKRAKKASRSILPSVISPQLV 186


>ref|XP_002312691.1| hypothetical protein POPTR_0008s19520g [Populus trichocarpa]
           gi|222852511|gb|EEE90058.1| hypothetical protein
           POPTR_0008s19520g [Populus trichocarpa]
          Length = 203

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 LLFRFLQSMFRKVSKRAKKATRSMLPPAFSPQLV 2
           LL RFLQSMF+K+SKRAKKA+RSMLP   SPQLV
Sbjct: 102 LLIRFLQSMFKKLSKRAKKASRSMLPAVISPQLV 135


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