BLASTX nr result
ID: Cocculus23_contig00028172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028172
(1215 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23243.3| unnamed protein product [Vitis vinifera] 456 e-126
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot... 456 e-126
ref|XP_007214554.1| hypothetical protein PRUPE_ppa000678mg [Prun... 433 e-119
ref|XP_007026072.1| Met-10+ like family protein / kelch repeat-c... 433 e-119
gb|EXB36806.1| tRNA wybutosine-synthesizing protein [Morus notab... 423 e-116
ref|XP_006396676.1| hypothetical protein EUTSA_v10028391mg [Eutr... 415 e-113
ref|XP_006449727.1| hypothetical protein CICLE_v10018338mg, part... 415 e-113
ref|XP_006467437.1| PREDICTED: tRNA wybutosine-synthesizing prot... 413 e-113
ref|XP_006467436.1| PREDICTED: tRNA wybutosine-synthesizing prot... 413 e-113
ref|XP_006286991.1| hypothetical protein CARUB_v10000136mg [Caps... 412 e-112
ref|XP_004507689.1| PREDICTED: tRNA wybutosine-synthesizing prot... 410 e-112
ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arab... 410 e-112
ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing prot... 409 e-111
ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutos... 409 e-111
ref|XP_006584077.1| PREDICTED: tRNA wybutosine-synthesizing prot... 409 e-111
gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00... 405 e-110
ref|NP_567268.2| Met-10+ like family protein / kelch repeat-cont... 405 e-110
ref|XP_007153947.1| hypothetical protein PHAVU_003G078700g, part... 404 e-110
ref|XP_004239703.1| PREDICTED: tRNA wybutosine-synthesizing prot... 403 e-110
ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [... 401 e-109
>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
Length = 1013
Score = 456 bits (1173), Expect = e-126
Identities = 239/402 (59%), Positives = 294/402 (73%), Gaps = 10/402 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A+M ST+P DKSPKG+ID I+PLL+++N+H S+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASMGSTEP---DKSPKGTIDRHIVPLLSAINRHNSYFTTSSCSGRISILSQ 59
Query: 998 P---ITTTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFILAVE 828
P T KKARGG+WLFITHD ADPN+V+ LLFPT G +QH +L FRFEPFI+AVE
Sbjct: 60 PSPAATNAHKKARGGSWLFITHDLADPNSVLALLFPTTGCS-SQHDDLVFRFEPFIVAVE 118
Query: 827 CRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYVRF 648
C+D+ +AQ LVSTA+SCGFRESGITS SKRV+VA+RCSIRLEVPLG V+VS EYVR+
Sbjct: 119 CKDVAAAQLLVSTAVSCGFRESGITSVSKRVMVAVRCSIRLEVPLGGGGRVLVSPEYVRY 178
Query: 647 LVGIANEKMELNRRRTECFNQVLESK-----LVGNRVLDDNEVGEDHQ-GDCFXXXXXXX 486
LVGIAN+KME NRRRTE F Q L+S G LD G++H DC
Sbjct: 179 LVGIANDKMETNRRRTEGFLQALQSSGFVESFNGGAGLDGAMGGDEHGCSDCKD------ 232
Query: 485 XXXXVRLVVGECDSEKAEVDAHLG-LGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDD 309
G+ +SE+ + G +G CS+S+ ++ + EPVEK+FLWGHS LD
Sbjct: 233 ---------GDANSERIIAEKESGSVGVLGCSLSIVQMEIIDEPVEKLFLWGHSACTLDT 283
Query: 308 KHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFV 129
+ +KV++FGGFGG+GRHARR++ +LD G L+A N E +PSPR+GHTSS+VG+ +F+
Sbjct: 284 INHKKVIVFGGFGGMGRHARRNDAFVLDPLHGTLKAVNAEGTPSPRLGHTSSMVGDLMFI 343
Query: 128 IGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
IGGR DP NILD+ WV D AKNEWR LEC GSVFPPRHRHAA
Sbjct: 344 IGGRADPENILDNVWVLDTAKNEWRRLECTGSVFPPRHRHAA 385
>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
vinifera]
Length = 1018
Score = 456 bits (1173), Expect = e-126
Identities = 239/402 (59%), Positives = 294/402 (73%), Gaps = 10/402 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A+M ST+P DKSPKG+ID I+PLL+++N+H S+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASMGSTEP---DKSPKGTIDRHIVPLLSAINRHNSYFTTSSCSGRISILSQ 59
Query: 998 P---ITTTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFILAVE 828
P T KKARGG+WLFITHD ADPN+V+ LLFPT G +QH +L FRFEPFI+AVE
Sbjct: 60 PSPAATNAHKKARGGSWLFITHDLADPNSVLALLFPTTGCS-SQHDDLVFRFEPFIVAVE 118
Query: 827 CRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYVRF 648
C+D+ +AQ LVSTA+SCGFRESGITS SKRV+VA+RCSIRLEVPLG V+VS EYVR+
Sbjct: 119 CKDVAAAQLLVSTAVSCGFRESGITSVSKRVMVAVRCSIRLEVPLGGGGRVLVSPEYVRY 178
Query: 647 LVGIANEKMELNRRRTECFNQVLESK-----LVGNRVLDDNEVGEDHQ-GDCFXXXXXXX 486
LVGIAN+KME NRRRTE F Q L+S G LD G++H DC
Sbjct: 179 LVGIANDKMETNRRRTEGFLQALQSSGFVESFNGGAGLDGAMGGDEHGCSDCKD------ 232
Query: 485 XXXXVRLVVGECDSEKAEVDAHLG-LGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDD 309
G+ +SE+ + G +G CS+S+ ++ + EPVEK+FLWGHS LD
Sbjct: 233 ---------GDANSERIIAEKESGSVGVLGCSLSIVQMEIIDEPVEKLFLWGHSACTLDT 283
Query: 308 KHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFV 129
+ +KV++FGGFGG+GRHARR++ +LD G L+A N E +PSPR+GHTSS+VG+ +F+
Sbjct: 284 INHKKVIVFGGFGGMGRHARRNDAFVLDPLHGTLKAVNAEGTPSPRLGHTSSMVGDLMFI 343
Query: 128 IGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
IGGR DP NILD+ WV D AKNEWR LEC GSVFPPRHRHAA
Sbjct: 344 IGGRADPENILDNVWVLDTAKNEWRRLECTGSVFPPRHRHAA 385
>ref|XP_007214554.1| hypothetical protein PRUPE_ppa000678mg [Prunus persica]
gi|462410419|gb|EMJ15753.1| hypothetical protein
PRUPE_ppa000678mg [Prunus persica]
Length = 1037
Score = 433 bits (1114), Expect = e-119
Identities = 228/401 (56%), Positives = 283/401 (70%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S + TDKSPKG++D PIIPLLN+LN HP++FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASLRSEE---TDKSPKGTVDAPIIPLLNTLNSHPNYFTTSSCSGRISILSQ 59
Query: 998 PITT---TKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQH---GELTFRFEPFIL 837
P + TKKKA GGTWLFITHDPADP++V++ LF + + + +L FRFEP I+
Sbjct: 60 PTHSKLKTKKKALGGTWLFITHDPADPDSVLNRLFRSDSTSKDEQDNQNDLVFRFEPLII 119
Query: 836 AVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEY 657
AVEC+DL SAQSLVS AI+CGFRESGIT++SKRVI+AIRCSIRLEVPLG+ +MVS EY
Sbjct: 120 AVECKDLASAQSLVSKAIACGFRESGITNSSKRVIIAIRCSIRLEVPLGSSHEIMVSCEY 179
Query: 656 VRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXXX 477
VRFLVG+ANEKME NR+RTE F L+S+ G
Sbjct: 180 VRFLVGVANEKMEANRKRTEAFFLALQSESGG--------------------FLGPTPAN 219
Query: 476 XVRLVVGECDSEKAEVDAHLGLGAHH---CSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
L GE + E + +AH G+ CS+SV ++ GEP E +FLWGHS L+ K
Sbjct: 220 GGTLADGEAELEARDDNAHSDSGSVEVPGCSLSVVEMAISGEPEENLFLWGHSACALEAK 279
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
++ VL+FGGFGGIGRH RR+ + L+D SG ++A N E SPSPR+GHTSS+VG+ VFVI
Sbjct: 280 NQNGVLVFGGFGGIGRHGRRNHSWLVDPFSGTVKAINVESSPSPRLGHTSSLVGDCVFVI 339
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DP IL+D WV + +K EW+ LEC+G VFPPRHRHAA
Sbjct: 340 GGRSDPEKILNDVWVLNTSKKEWKFLECSGDVFPPRHRHAA 380
>ref|XP_007026072.1| Met-10+ like family protein / kelch repeat-containing protein,
putative isoform 1 [Theobroma cacao]
gi|508781438|gb|EOY28694.1| Met-10+ like family protein /
kelch repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 1048
Score = 433 bits (1113), Expect = e-119
Identities = 230/400 (57%), Positives = 282/400 (70%), Gaps = 8/400 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
F+KRKA+T+A+++S + TDKSPKG++DTPIIPLL+++N HPS+FTTSSCSGRISILS
Sbjct: 3 FDKRKASTLASLSSNE---TDKSPKGTLDTPIIPLLDAINNHPSYFTTSSCSGRISILSQ 59
Query: 998 PI------TTTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFIL 837
P TKKKARGGTWLFITHD ADP++VI LLF + +TQ EL FRFEP I+
Sbjct: 60 PKPDPNSNNPTKKKARGGTWLFITHDMADPDSVISLLF-ADSTKLTQLSELVFRFEPLII 118
Query: 836 AVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEY 657
AVECRDL SAQ+LVS AI+CGFRESGITS SKRVIV IRCSIR+EVPLG +MVSK+Y
Sbjct: 119 AVECRDLNSAQNLVSLAIACGFRESGITSVSKRVIVGIRCSIRMEVPLGDTQKIMVSKDY 178
Query: 656 VRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEV-GEDHQGDCFXXXXXXXXX 480
VRFLV +ANEKME NR+R+E F + G + + GE GDC
Sbjct: 179 VRFLVEVANEKMEANRQRSEGFLRAFMKDQAGAFENGNGSICGES--GDCNEGQDGLQRN 236
Query: 479 XXVRLVVGECDSEKAEVDAHLGL-GAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDKH 303
+ ++ + G G S+S+TK+V VGEPVE++FLWGHS +D+
Sbjct: 237 FGDAQDIDPNETTPFSCQSLAGTDGIRSFSLSITKMVIVGEPVERLFLWGHSACTVDNID 296
Query: 302 RRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVIG 123
+ VL+FGGFGGIGRHARR+++ LLD G L+ N PSPR+GHTSS+VG+ +FVIG
Sbjct: 297 KTMVLVFGGFGGIGRHARRNDSFLLDPLLGNLKEINVVGCPSPRLGHTSSLVGDCMFVIG 356
Query: 122 GRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GR DPLNIL D WV + KNEWRLL+C G FPPRHRHAA
Sbjct: 357 GRADPLNILSDVWVLNTVKNEWRLLDCTGRAFPPRHRHAA 396
>gb|EXB36806.1| tRNA wybutosine-synthesizing protein [Morus notabilis]
Length = 1028
Score = 423 bits (1088), Expect = e-116
Identities = 227/403 (56%), Positives = 277/403 (68%), Gaps = 11/403 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRK AT+A++ ST TDKSPKG++DTPIIPL+N++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKEATLASLDST---ATDKSPKGTLDTPIIPLINAINAHPSYFTTSSCSGRISILSQ 59
Query: 998 PITTT-----KKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFILA 834
P T KKKA GG+WLFITHD ADP+TV++LLFP+ S +L FRFEPFILA
Sbjct: 60 PTPTAFSTNPKKKASGGSWLFITHDRADPDTVLNLLFPSESSQCDHPSDLVFRFEPFILA 119
Query: 833 VECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYV 654
VECRDL +AQSLVS AI+ GFRESGITSA KRVI+AIRCSIRLE+PLG VMVS EYV
Sbjct: 120 VECRDLAAAQSLVSIAIAAGFRESGITSAGKRVIIAIRCSIRLEIPLGRERNVMVSPEYV 179
Query: 653 RFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXXXX 474
R++V IANEKME NR+RTE F Q L ++ D +C
Sbjct: 180 RYVVAIANEKMEANRKRTEGFFQALR---------NNGFASMDKPVECGNG--------- 221
Query: 473 VRLVVGECDSEKAEVDA-----HLG-LGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILD 312
C + AE+D H G + S+ V K+ VGEP+EK+FLWGHS L
Sbjct: 222 -----SVCGGDSAELDGKDEGFHSGFVQVPSSSMPVVKMEIVGEPIEKLFLWGHSACKLG 276
Query: 311 DKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVF 132
+++ VL+FGGFGG+GRH RR++ LLLDT SG L+ + PSPR+GHTSS+VG+S+F
Sbjct: 277 SSNQKGVLVFGGFGGMGRHGRRNDCLLLDTWSGTLKEIVTDHGPSPRLGHTSSLVGDSMF 336
Query: 131 VIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
VIGGR P++IL D WV + +NEWR LEC+G FPPRHRH A
Sbjct: 337 VIGGRAGPVDILSDVWVLNTVENEWRFLECSGD-FPPRHRHVA 378
>ref|XP_006396676.1| hypothetical protein EUTSA_v10028391mg [Eutrema salsugineum]
gi|557097693|gb|ESQ38129.1| hypothetical protein
EUTSA_v10028391mg [Eutrema salsugineum]
Length = 1007
Score = 415 bits (1067), Expect = e-113
Identities = 222/401 (55%), Positives = 277/401 (69%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S S TDKSPKG +D PI+PLL ++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASIRS---SVTDKSPKGYLDEPIVPLLETINHHPSYFTTSSCSGRISILSQ 59
Query: 998 PI----TTTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT---QHGELTFRFEPFI 840
P +TKKKARGG+WL+ITHDPADP+ VI LLFP+ + + Q EL FRFEP I
Sbjct: 60 PKPESNASTKKKARGGSWLYITHDPADPDLVISLLFPSQSTRIDPLDQPSELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSAS--KRVIVAIRCSIRLEVPLGAVDGVMVS 666
+AVEC+DL SAQ LV+TAIS GFRESGITS KRVI+AIRCSIR+EVPLG + +MVS
Sbjct: 120 IAVECKDLGSAQFLVATAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPLGDTEKLMVS 179
Query: 665 KEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXX 486
EYV+FLV IANEKM+ NR+RT+ F+ L S N +D E ++++
Sbjct: 180 PEYVKFLVDIANEKMDANRKRTDGFSLALTSNGFKNPDANDVEDDDNYEN---------- 229
Query: 485 XXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
+VG DS D H GL +S ++ GEPVEK+ LWGHS +
Sbjct: 230 -------LVGNHDSSINNGDLHPGLQQELMPLSALSII--GEPVEKLHLWGHSACTIGKT 280
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
R++V++FGGFGG GRHARR+E++LLD G L SPSPR+GHT+S+VG+ +FVI
Sbjct: 281 DRKEVIVFGGFGGFGRHARRNESMLLDPSCGTLSLIAVNGSPSPRLGHTASMVGDLMFVI 340
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DPLNIL+D W+ D++K EW C+GS FPPRHRHAA
Sbjct: 341 GGRADPLNILNDVWMLDISKCEWSSQRCSGSEFPPRHRHAA 381
>ref|XP_006449727.1| hypothetical protein CICLE_v10018338mg, partial [Citrus clementina]
gi|557552338|gb|ESR62967.1| hypothetical protein
CICLE_v10018338mg, partial [Citrus clementina]
Length = 1009
Score = 415 bits (1066), Expect = e-113
Identities = 222/405 (54%), Positives = 288/405 (71%), Gaps = 3/405 (0%)
Frame = -2
Query: 1208 QTNKQTMESSFEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSS 1029
QT K+ SFE+RKAAT+A++ S S TDKSPKG++DTPIIPLLN++N HP+++TTSS
Sbjct: 22 QTGKKE-NMSFEQRKAATLASLRS---SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSS 77
Query: 1028 CSGRISILSTPITTTKKKARGGTWLFITHDPADPNTVIDLLF-PTHGSVVTQ-HGELTFR 855
CSGR+SI S P+ K +GGTWLFITHDPAD ++V+ LLF PTH + + +L FR
Sbjct: 78 CSGRVSIFSHPVN----KPKGGTWLFITHDPADVDSVLSLLFFPTHSTPSSPTRDQLVFR 133
Query: 854 FEPFILAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGV 675
FEP I+AVECRD+ SA++LVS A+S G RESG+TS KRVIV IRCS+RLEVPLG V
Sbjct: 134 FEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLGESGNV 193
Query: 674 MVSKEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXX 495
+VS++YVRFLVGIAN+K+E N RR + F Q +VG+ V +E +GD
Sbjct: 194 LVSQDYVRFLVGIANQKLEANSRRIDGFLQAFNF-MVGSSVSSKDE--HQDRGDL----- 245
Query: 494 XXXXXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSIL 315
K VD G+ + C +SV+++V GEPVEK+FLWGHS IL
Sbjct: 246 ------------------KKNVDGPPGVPS--CGLSVSRIVIAGEPVEKLFLWGHSACIL 285
Query: 314 DDK-HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGES 138
+ + ++L+FGGFGG+GRHARR++ LLLD G ++A + E SPSPR+GHTSS+VG+
Sbjct: 286 GNSINDSQILVFGGFGGMGRHARRNDLLLLDPLQGTIKAIHTEGSPSPRLGHTSSLVGDH 345
Query: 137 VFVIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
+F+IGGR DPLNIL D WVF++AK++W LLEC+GSVF PRHRHAA
Sbjct: 346 MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 390
>ref|XP_006467437.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like isoform X2
[Citrus sinensis]
Length = 950
Score = 413 bits (1061), Expect = e-113
Identities = 218/396 (55%), Positives = 283/396 (71%), Gaps = 3/396 (0%)
Frame = -2
Query: 1181 SFEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILS 1002
SFE+RKAAT+A+++S S TDKSPKG++DTPIIPLLN++N HP+++TTSSCSGRISI S
Sbjct: 2 SFEQRKAATLASLSS---SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFS 58
Query: 1001 TPITTTKKKARGGTWLFITHDPADPNTVIDLLF-PTHGSVVTQ-HGELTFRFEPFILAVE 828
P+ K +GGTWLFITHDPAD ++V+ LLF PTH + + +L FRFEP I+AVE
Sbjct: 59 HPVN----KPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVE 114
Query: 827 CRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYVRF 648
CRD+ SA++LVS A+S G RESG+TS KRVIV IRCS+RLEVPLG V+VS++YVRF
Sbjct: 115 CRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLGESGNVLVSQDYVRF 174
Query: 647 LVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXXXXVR 468
LVGIAN+K+E N RR + F Q +VG+ V +E HQ
Sbjct: 175 LVGIANQKLEANSRRIDGFLQAFNF-MVGSSVSSKDE----HQN---------------- 213
Query: 467 LVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK-HRRKV 291
C VD G+ + C +SV+++V GEPVEK+FLWGHS IL + + ++
Sbjct: 214 -----CGDLTKNVDGPPGVPS--CGLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQI 266
Query: 290 LIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVIGGRGD 111
L+FGGFGG+GRHARR++ LLD G ++A + E SPSPR+GHTSS++G+ +F+IGGR D
Sbjct: 267 LVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRAD 326
Query: 110 PLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
PLNIL D WVF++AK++W LLEC+GSVF PRHRHAA
Sbjct: 327 PLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 362
>ref|XP_006467436.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like isoform X1
[Citrus sinensis]
Length = 1019
Score = 413 bits (1061), Expect = e-113
Identities = 218/396 (55%), Positives = 283/396 (71%), Gaps = 3/396 (0%)
Frame = -2
Query: 1181 SFEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILS 1002
SFE+RKAAT+A+++S S TDKSPKG++DTPIIPLLN++N HP+++TTSSCSGRISI S
Sbjct: 2 SFEQRKAATLASLSS---SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFS 58
Query: 1001 TPITTTKKKARGGTWLFITHDPADPNTVIDLLF-PTHGSVVTQ-HGELTFRFEPFILAVE 828
P+ K +GGTWLFITHDPAD ++V+ LLF PTH + + +L FRFEP I+AVE
Sbjct: 59 HPVN----KPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVE 114
Query: 827 CRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYVRF 648
CRD+ SA++LVS A+S G RESG+TS KRVIV IRCS+RLEVPLG V+VS++YVRF
Sbjct: 115 CRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLGESGNVLVSQDYVRF 174
Query: 647 LVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXXXXVR 468
LVGIAN+K+E N RR + F Q +VG+ V +E HQ
Sbjct: 175 LVGIANQKLEANSRRIDGFLQAFNF-MVGSSVSSKDE----HQN---------------- 213
Query: 467 LVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK-HRRKV 291
C VD G+ + C +SV+++V GEPVEK+FLWGHS IL + + ++
Sbjct: 214 -----CGDLTKNVDGPPGVPS--CGLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQI 266
Query: 290 LIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVIGGRGD 111
L+FGGFGG+GRHARR++ LLD G ++A + E SPSPR+GHTSS++G+ +F+IGGR D
Sbjct: 267 LVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRAD 326
Query: 110 PLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
PLNIL D WVF++AK++W LLEC+GSVF PRHRHAA
Sbjct: 327 PLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 362
>ref|XP_006286991.1| hypothetical protein CARUB_v10000136mg [Capsella rubella]
gi|482555697|gb|EOA19889.1| hypothetical protein
CARUB_v10000136mg [Capsella rubella]
Length = 994
Score = 412 bits (1060), Expect = e-112
Identities = 227/401 (56%), Positives = 274/401 (68%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S S TDKSPKG +D PIIPLL ++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASIRS---SVTDKSPKGYLDEPIIPLLETINHHPSYFTTSSCSGRISILSQ 59
Query: 998 PIT----TTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT---QHGELTFRFEPFI 840
P +TKKKARGG+WL+ITHDPADP V+ LLFP+ + + Q EL FRFEP I
Sbjct: 60 PKPKLNDSTKKKARGGSWLYITHDPADPELVVSLLFPSKSNQIDPIDQPSELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSAS--KRVIVAIRCSIRLEVPLGAVDGVMVS 666
+AVEC+DL SAQ LV+ AIS GFRESGITS KRVI+AIRCSIR+EVPLG +MVS
Sbjct: 120 IAVECKDLGSAQFLVAVAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPLGDTQKLMVS 179
Query: 665 KEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXX 486
EYV+FLV IANEKM+ NR+RT+ F VL S G + D N+V ED +
Sbjct: 180 PEYVKFLVDIANEKMDANRKRTDGFGVVLASN--GFKNPDANDVDEDDNYEN-------- 229
Query: 485 XXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
+ G DS D H GL + I ++KL VGE VEK+ LWGHS +D
Sbjct: 230 -------LAGNHDSTINNGDLHPGLQQN--LIPLSKLSIVGETVEKLHLWGHSACTIDKT 280
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
R++V++FGGFGG GRHARR+E+LLLD G L+ SPS R+GHT+S+VG+ +FVI
Sbjct: 281 DRKEVIVFGGFGGFGRHARRNESLLLDPSCGTLKLIAVNESPSARLGHTASMVGDFMFVI 340
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DPLNIL+D W D+ K EW C GS FPPRHRHAA
Sbjct: 341 GGRADPLNILNDVWRLDIPKGEWSSQRCIGSEFPPRHRHAA 381
>ref|XP_004507689.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cicer
arietinum]
Length = 1046
Score = 410 bits (1053), Expect = e-112
Identities = 217/399 (54%), Positives = 279/399 (69%), Gaps = 7/399 (1%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKA T+A++ ST+ +DKSPKGS+DTPIIPL+N+LN++P++FTTSSCSGRISILS
Sbjct: 3 FEKRKATTLASLNSTE---SDKSPKGSLDTPIIPLINTLNQNPNYFTTSSCSGRISILSQ 59
Query: 998 PITT-----TKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFILA 834
PI+ TKKKA+GG+W+F++H PADPN++I LLF + S + EL FRFEP I+A
Sbjct: 60 PISPIPSPQTKKKAKGGSWIFVSHHPADPNSLIPLLFSSE-STQSPLSELVFRFEPLIIA 118
Query: 833 VECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKEYV 654
+EC+DL SA SLVS AIS GFRESGIT+A+KRVI+AIRCSIR+EVPLG +MV+ EYV
Sbjct: 119 IECKDLISAHSLVSLAISSGFRESGITNANKRVIIAIRCSIRMEVPLGDTHKIMVTPEYV 178
Query: 653 RFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXXXX 474
R+LV +AN KME NR RTE F ++L+S +++DN
Sbjct: 179 RYLVQVANNKMEANRNRTERFLRLLQS---NGAIVEDNCNRLSQTNGVELVCSHLQLDDQ 235
Query: 473 VRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDKHRRK 294
+L G + +G+ C++S+ + VGEPVEK+FLWGHS LD+ +K
Sbjct: 236 SQLTNGNASETSSGF-----VGSPGCTLSIAHIEIVGEPVEKLFLWGHSACALDNADHKK 290
Query: 293 VLIFGGFGGIGRHARRSETLLLDTQSGILEAANF--ERSPSPRMGHTSSVVGESVFVIGG 120
V++ GGFGG+GRHARR++ LLLD SG LE N PSPR+GHT+S+VG+ +FVIGG
Sbjct: 291 VIVCGGFGGLGRHARRNDLLLLDPCSGNLETINTIGGACPSPRLGHTASLVGDLMFVIGG 350
Query: 119 RGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
R P IL D W FD KN W+LL+C GSVFPPRHRHAA
Sbjct: 351 RTGPDKILSDVWSFDTTKNCWKLLQCGGSVFPPRHRHAA 389
>ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp.
lyrata] gi|297318540|gb|EFH48962.1| hypothetical protein
ARALYDRAFT_490107 [Arabidopsis lyrata subsp. lyrata]
Length = 996
Score = 410 bits (1053), Expect = e-112
Identities = 225/401 (56%), Positives = 276/401 (68%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S S TDKSPKG +D PIIPLL ++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASIRS---SVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQ 59
Query: 998 PIT----TTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT---QHGELTFRFEPFI 840
P +TKKKARGG+WL+ITHDPAD + VI LLFP+ + + Q EL FRFEP I
Sbjct: 60 PKPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSAS--KRVIVAIRCSIRLEVPLGAVDGVMVS 666
+AVEC+DL SAQ LV+ AIS GFRESGITS KRVI+AIRCSIR+EVPLG + +MVS
Sbjct: 120 IAVECKDLGSAQFLVALAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPLGDTEKLMVS 179
Query: 665 KEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXX 486
EYV+FLV I NEKM+ NR+RT+ F+ L S G + D N+V ED +
Sbjct: 180 PEYVKFLVDIGNEKMDANRKRTDGFSVALTSN--GFKNPDANDVDEDDNYEN-------- 229
Query: 485 XXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
+ G+ DS + H GL I ++KL VGEPVEK+ LWGHS +D
Sbjct: 230 -------LAGDHDSSINNGNLHPGL--QQDLIPLSKLSIVGEPVEKLHLWGHSACTIDKP 280
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
R++V++FGGFGG GRHARR+E+LLLD G L+ SPS R+GHT+S+VG+ +FVI
Sbjct: 281 DRKEVIVFGGFGGFGRHARRNESLLLDPSCGNLKLIAVNESPSARLGHTASMVGDFMFVI 340
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DPLNIL+D W D++K EW C GS FPPRHRHAA
Sbjct: 341 GGRADPLNILNDVWRLDISKGEWSSQRCIGSEFPPRHRHAA 381
>ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cucumis
sativus]
Length = 1035
Score = 409 bits (1051), Expect = e-111
Identities = 218/403 (54%), Positives = 286/403 (70%), Gaps = 11/403 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ ST+ TDKSPKGS+DTPIIPL+N+LN HPS+FTTSSCSGRISIL+
Sbjct: 3 FEKRKAATMASLGSTE---TDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISILAQ 59
Query: 998 PITTT-------KKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFI 840
PI+TT KKKA GG+WLF++H+ A+PN+VIDLLF + S + EL FRFEP I
Sbjct: 60 PISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSVIDLLFRSP-STNRELSELVFRFEPLI 118
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKE 660
+AVEC+DL SAQ+LVSTAISCGFRESGITSASKRVI+AIRCSIR+EVPLG + +MV+ E
Sbjct: 119 IAVECKDLGSAQALVSTAISCGFRESGITSASKRVIIAIRCSIRMEVPLGTSEKIMVTPE 178
Query: 659 YVRFLVGIANEKMELNRRRTECFNQVLESKLV-GNRV---LDDNEVGEDHQGDCFXXXXX 492
YV++LV +ANEKM N++RT+ F + L+S + +R + E E+
Sbjct: 179 YVQYLVNVANEKMVANKKRTDGFLKGLQSSISDASRTCHGIPSREATENVNDSLDSKGHD 238
Query: 491 XXXXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILD 312
+ G + +E ++ S+SV ++ GEP+EK+F+WGHS + +
Sbjct: 239 CADGDDGAALEGGVRNANSEACSY--------SLSVEQIDIAGEPIEKLFIWGHSATTIH 290
Query: 311 DKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVF 132
D KV+ FGGFGG+GRHARR++ LLLD S L+ N E SPSPR+GHTSS+VG+ ++
Sbjct: 291 D----KVIAFGGFGGMGRHARRNDLLLLDMLSYTLQTINVEDSPSPRLGHTSSLVGDRLY 346
Query: 131 VIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
V+GGR DP IL+D W+F++ + +W LLEC GS F PRHRHAA
Sbjct: 347 VVGGRTDPTCILNDVWLFNITQEKWTLLECTGSPFSPRHRHAA 389
>ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein
2/3/4-like [Cucumis sativus]
Length = 1034
Score = 409 bits (1051), Expect = e-111
Identities = 218/403 (54%), Positives = 286/403 (70%), Gaps = 11/403 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ ST+ TDKSPKGS+DTPIIPL+N+LN HPS+FTTSSCSGRISIL+
Sbjct: 3 FEKRKAATMASLGSTE---TDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISILAQ 59
Query: 998 PITTT-------KKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFEPFI 840
PI+TT KKKA GG+WLF++H+ A+PN+VIDLLF + S + EL FRFEP I
Sbjct: 60 PISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSVIDLLFRSP-STNRELSELVFRFEPLI 118
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKE 660
+AVEC+DL SAQ+LVSTAISCGFRESGITSASKRVI+AIRCSIR+EVPLG + +MV+ E
Sbjct: 119 IAVECKDLGSAQALVSTAISCGFRESGITSASKRVIIAIRCSIRMEVPLGTSEKIMVTPE 178
Query: 659 YVRFLVGIANEKMELNRRRTECFNQVLESKLV-GNRV---LDDNEVGEDHQGDCFXXXXX 492
YV++LV +ANEKM N++RT+ F + L+S + +R + E E+
Sbjct: 179 YVQYLVNVANEKMVANKKRTDGFLKGLQSSISDASRTCHGIPSREATENVNDSLDSKGHD 238
Query: 491 XXXXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILD 312
+ G + +E ++ S+SV ++ GEP+EK+F+WGHS + +
Sbjct: 239 CADGDDGAALEGGVRNANSEACSY--------SLSVEQIDIAGEPIEKLFIWGHSATTIH 290
Query: 311 DKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVF 132
D KV+ FGGFGG+GRHARR++ LLLD S L+ N E SPSPR+GHTSS+VG+ ++
Sbjct: 291 D----KVIAFGGFGGMGRHARRNDLLLLDMLSYTLQTINVEDSPSPRLGHTSSLVGDRLY 346
Query: 131 VIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
V+GGR DP IL+D W+F++ + +W LLEC GS F PRHRHAA
Sbjct: 347 VVGGRTDPTCILNDVWLFNITQEKWTLLECTGSPFSPRHRHAA 389
>ref|XP_006584077.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
max]
Length = 1075
Score = 409 bits (1050), Expect = e-111
Identities = 224/411 (54%), Positives = 281/411 (68%), Gaps = 12/411 (2%)
Frame = -2
Query: 1199 KQTMESSFEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSG 1020
K+ ME FEKRKAAT+A+++ST+ +DKSPKGS+D I+PLLN+LN++PS+FTTSSCSG
Sbjct: 31 KKRME--FEKRKAATLASLSSTE---SDKSPKGSLDAAIVPLLNTLNQNPSYFTTSSCSG 85
Query: 1019 RISILSTPITTT-----KKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT-QHGELTF 858
RISIL+ P++ + KKKARGGTWLF++HDPADP++V+ LLFP+ + EL F
Sbjct: 86 RISILAQPLSLSDSPNPKKKARGGTWLFVSHDPADPDSVLSLLFPSESTPSPFAPSELVF 145
Query: 857 RFEPFILAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDG 678
RFEP I+A+ECRDL SA SLVS AISCGFRESGIT+A KR I+AIRCSIR+EVPLG
Sbjct: 146 RFEPLIIALECRDLSSAHSLVSLAISCGFRESGITNAKKRFIIAIRCSIRMEVPLGDTRN 205
Query: 677 VMVSKEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNE---VGEDHQGDCF 507
VMV+ YVR+LV +AN+KME NR+RT+ F QVL L VL DN G + D
Sbjct: 206 VMVTPHYVRYLVQVANDKMEANRKRTQRFFQVL---LSNGSVLADNSNHLSGTNEVCDHL 262
Query: 506 XXXXXXXXXXXVRLVVGECDSEKAEVDAHLG-LGAHHCSISVTKLVTVGEPVEKIFLWGH 330
+ GE E V G +G+ C +S+ VGEPVEK++ WGH
Sbjct: 263 E-------------LEGESQLENGNVGTSSGTVGSPGCGLSIGHFEIVGEPVEKLYRWGH 309
Query: 329 SVSILDDKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFE--RSPSPRMGHTS 156
S L D +KV++FGGFGG+GRHARR++ LLLD SG L+ + SPSPR+GHT+
Sbjct: 310 SACGLGDADHKKVIVFGGFGGMGRHARRNDLLLLDPYSGNLDMVSTVGCASPSPRLGHTA 369
Query: 155 SVVGESVFVIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
S+VG +FVIGGR P IL D W+ D KN W LL+C S FPPRHRHAA
Sbjct: 370 SLVGNRMFVIGGRTGPDKILSDVWILDTTKNSWNLLQCGDSGFPPRHRHAA 420
>gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00145 (C-5 cytosine-specific DNA
methylase); score=10.4. E=0.051, N=1 [Arabidopsis
thaliana] gi|7267225|emb|CAB80832.1| AT4g04670
[Arabidopsis thaliana]
Length = 977
Score = 405 bits (1041), Expect = e-110
Identities = 219/401 (54%), Positives = 275/401 (68%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S S TDKSPKG +D PIIPLL ++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASIRS---SVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQ 59
Query: 998 PIT----TTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT---QHGELTFRFEPFI 840
P +TKKKARGG+WL+ITHDPAD + VI LLFP+ + + Q EL FRFEP I
Sbjct: 60 PKPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSAS--KRVIVAIRCSIRLEVPLGAVDGVMVS 666
+AVEC+DL SAQ LV+ AIS GFRESGITS KRVI+AIRCSIR+EVP+G + +MVS
Sbjct: 120 IAVECKDLGSAQFLVALAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPIGDTEKLMVS 179
Query: 665 KEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXX 486
EYV+FLV IANEKM+ NR+RT+ F+ L S G + D+N+V ED +
Sbjct: 180 PEYVKFLVDIANEKMDANRKRTDGFSVALASN--GFKNPDENDVDEDDNYENLA------ 231
Query: 485 XXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
+ + + + +L G I + KL VGEPVEK+ LWGHS +D+
Sbjct: 232 -----------ANHDSSINNGNLYPGVQKELIPLEKLSIVGEPVEKLHLWGHSACTIDES 280
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
R++V++FGGFGG GRHARR+E+LLL+ G L+ SPS R+GHT+S+VG+ +FVI
Sbjct: 281 DRKEVIVFGGFGGFGRHARRNESLLLNPSCGTLKLIAVNESPSARLGHTASMVGDFMFVI 340
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DPLNIL+D W D++ EW C GS FPPRHRHAA
Sbjct: 341 GGRADPLNILNDVWRLDISTGEWSSQRCVGSEFPPRHRHAA 381
>ref|NP_567268.2| Met-10+ like family protein / kelch repeat-containing protein
[Arabidopsis thaliana]
gi|75162488|sp|Q8W4K1.1|TYW23_ARATH RecName: Full=tRNA
wybutosine-synthesizing protein 2/3/4; Includes: RecName:
Full=tRNA wybutosine-synthesizing protein 3 homolog;
Includes: RecName: Full=tRNA wybutosine-synthesizing
protein 2 homolog gi|17064868|gb|AAL32588.1| Unknown
protein [Arabidopsis thaliana] gi|30725408|gb|AAP37726.1|
At4g04670 [Arabidopsis thaliana]
gi|332657010|gb|AEE82410.1| Met-10+ like family protein /
kelch repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 405 bits (1041), Expect = e-110
Identities = 219/401 (54%), Positives = 275/401 (68%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRKAAT+A++ S S TDKSPKG +D PIIPLL ++N HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKAATLASIRS---SVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQ 59
Query: 998 PIT----TTKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVT---QHGELTFRFEPFI 840
P +TKKKARGG+WL+ITHDPAD + VI LLFP+ + + Q EL FRFEP I
Sbjct: 60 PKPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSAS--KRVIVAIRCSIRLEVPLGAVDGVMVS 666
+AVEC+DL SAQ LV+ AIS GFRESGITS KRVI+AIRCSIR+EVP+G + +MVS
Sbjct: 120 IAVECKDLGSAQFLVALAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPIGDTEKLMVS 179
Query: 665 KEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXX 486
EYV+FLV IANEKM+ NR+RT+ F+ L S G + D+N+V ED +
Sbjct: 180 PEYVKFLVDIANEKMDANRKRTDGFSVALASN--GFKNPDENDVDEDDNYENLA------ 231
Query: 485 XXXXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDK 306
+ + + + +L G I + KL VGEPVEK+ LWGHS +D+
Sbjct: 232 -----------ANHDSSINNGNLYPGVQKELIPLEKLSIVGEPVEKLHLWGHSACTIDES 280
Query: 305 HRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGESVFVI 126
R++V++FGGFGG GRHARR+E+LLL+ G L+ SPS R+GHT+S+VG+ +FVI
Sbjct: 281 DRKEVIVFGGFGGFGRHARRNESLLLNPSCGTLKLIAVNESPSARLGHTASMVGDFMFVI 340
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR DPLNIL+D W D++ EW C GS FPPRHRHAA
Sbjct: 341 GGRADPLNILNDVWRLDISTGEWSSQRCVGSEFPPRHRHAA 381
>ref|XP_007153947.1| hypothetical protein PHAVU_003G078700g, partial [Phaseolus vulgaris]
gi|561027301|gb|ESW25941.1| hypothetical protein
PHAVU_003G078700g, partial [Phaseolus vulgaris]
Length = 1053
Score = 404 bits (1039), Expect = e-110
Identities = 218/414 (52%), Positives = 285/414 (68%), Gaps = 15/414 (3%)
Frame = -2
Query: 1199 KQTMESSFEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSG 1020
++TME FEKRKAA +A++ ST+ DKSPKGS+D PI+PL+N+LN++PS+FTTSSCSG
Sbjct: 12 RKTME--FEKRKAAALASLISTE---LDKSPKGSLDAPIVPLVNALNQNPSYFTTSSCSG 66
Query: 1019 RISILSTPITTT---KKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQHGELTFRFE 849
RISILS P++ + KKKARGGTWLF++HDPADP++V+ LLFP+ + EL FRFE
Sbjct: 67 RISILSQPLSESPNPKKKARGGTWLFVSHDPADPDSVLSLLFPSESTRSPFVSELVFRFE 126
Query: 848 PFILAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMV 669
P I+A+ECRDL +A SLVS AISCGFRESGIT+A KRVI+AIRCSIR+EVPLG VMV
Sbjct: 127 PLIIALECRDLSAAHSLVSLAISCGFRESGITNAKKRVIIAIRCSIRMEVPLGDTRTVMV 186
Query: 668 SKEYVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXX 489
+ EY+R+LV +AN+KME NR+RT+ F QV++S ++ DN GDC
Sbjct: 187 TPEYIRYLVRVANDKMEANRKRTQRFFQVIQSTC---SLITDN-------GDCLLPTNE- 235
Query: 488 XXXXXVRLVVGECDSEKAEVDAHLGLGAHHCS----------ISVTKLVTVGEPVEKIFL 339
C+ + E ++ LG G S +S++ VGEP K+FL
Sbjct: 236 -----------ACNHLELEDESQLGNGNAETSKGSVSTPGSDVSISHFDIVGEPAGKLFL 284
Query: 338 WGHSVSILDDKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFE--RSPSPRMG 165
WGHS L++ +KV+IFGGFGG+GRHARR++ LLLD SG LE + SP+PR+G
Sbjct: 285 WGHSACGLNNAGVKKVIIFGGFGGMGRHARRNDLLLLDPYSGNLEMVSTVGCASPTPRLG 344
Query: 164 HTSSVVGESVFVIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
HT+S+VG +FVIGGR P IL D W+ D N W+LL+C+ ++F PRHRHAA
Sbjct: 345 HTASLVGNCMFVIGGRTGPDKILSDVWILDTTMNSWKLLQCSDNLFLPRHRHAA 398
>ref|XP_004239703.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Solanum
lycopersicum]
Length = 1038
Score = 403 bits (1035), Expect = e-110
Identities = 215/406 (52%), Positives = 284/406 (69%), Gaps = 14/406 (3%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRK A +++M S +P DKSPKG+ID PIIPLLN+LN HPS+FTTSSCSGRISILS
Sbjct: 3 FEKRKLAALSSMNSPEP---DKSPKGNIDAPIIPLLNTLNSHPSYFTTSSCSGRISILSQ 59
Query: 998 PITT----TKKKARGGTWLFITHDPADPNTVIDLLFPTHG-------SVVTQHGELTFRF 852
PIT TKKKA+GG W+FI+HDP +P+ ++ LFP+ + V L FRF
Sbjct: 60 PITPITNPTKKKAKGGKWVFISHDPIEPHLILSHLFPSKSIQPVKSVTDVADLHSLVFRF 119
Query: 851 EPFILAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVM 672
EP I+AVEC+D+ +AQ LVS AIS GFRESGITS ++RVI+AIRCSIRLEVPLG + +M
Sbjct: 120 EPLIIAVECKDIEAAQFLVSLAISSGFRESGITSVNRRVIIAIRCSIRLEVPLGDTEKIM 179
Query: 671 VSKEYVRFLVGIANEKMELNRRRTECFNQVL-ESKLVGNRVLDDNEVGEDHQGDCFXXXX 495
VS EYV++LV +ANEKME+NR+RT+ F +L ++ +G+++ + EV DC
Sbjct: 180 VSSEYVKYLVELANEKMEVNRKRTDNFLDILLKNGFLGSQI-SNGEV------DCDDSDL 232
Query: 494 XXXXXXXVRLVVGECDSEKAEVDAHLGLG--AHHCSISVTKLVTVGEPVEKIFLWGHSVS 321
V G ++++ + D A ++ KLV GE +E++FLWGHS S
Sbjct: 233 LENSLVNG--VNGNGNAKRRDFDDSCSGSEVAPDINLHTVKLVISGESIERLFLWGHSSS 290
Query: 320 ILDDKHRRKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFERSPSPRMGHTSSVVGE 141
+DD ++KVLIFGGFGG+GRHARR + LLLD + G +E + +P PR+GHTSS++G+
Sbjct: 291 TMDDVDKKKVLIFGGFGGMGRHARRRDLLLLDLECGRMEVIDVLDAPCPRVGHTSSMIGD 350
Query: 140 SVFVIGGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
+++VIGGR DP NIL+D WVF+V K WRLLEC+G+ F PRHRHAA
Sbjct: 351 AMYVIGGRADPSNILNDVWVFNVTKKNWRLLECSGTPFLPRHRHAA 396
>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
protein 2/3/4 [Medicago truncatula]
Length = 1046
Score = 401 bits (1031), Expect = e-109
Identities = 210/401 (52%), Positives = 283/401 (70%), Gaps = 9/401 (2%)
Frame = -2
Query: 1178 FEKRKAATIAAMASTDPSTTDKSPKGSIDTPIIPLLNSLNKHPSFFTTSSCSGRISILST 999
FEKRK+AT+A++ ST+ +DKSPKGS+DTPIIPL+N+LN++P++FTTSSCSGRISILS
Sbjct: 3 FEKRKSATLASLNSTE---SDKSPKGSLDTPIIPLINTLNQNPNYFTTSSCSGRISILSQ 59
Query: 998 PITT-----TKKKARGGTWLFITHDPADPNTVIDLLFPTHGSVVTQH--GELTFRFEPFI 840
P++ TKKKA+GGTWLF++H A+P+++I LLFP+ + TQ EL FRFEP I
Sbjct: 60 PLSPIPSPQTKKKAKGGTWLFVSHHTANPDSIISLLFPSDSTHSTQSPISELVFRFEPLI 119
Query: 839 LAVECRDLPSAQSLVSTAISCGFRESGITSASKRVIVAIRCSIRLEVPLGAVDGVMVSKE 660
+A+EC++L SAQSLV+ AIS GFRESGIT+A+KRVI+AIRCSIR+EVPLG +MV+ E
Sbjct: 120 IAIECKELSSAQSLVALAISSGFRESGITNANKRVIIAIRCSIRMEVPLGDTQKIMVTPE 179
Query: 659 YVRFLVGIANEKMELNRRRTECFNQVLESKLVGNRVLDDNEVGEDHQGDCFXXXXXXXXX 480
YV++LV +ANEKME N RT+ F ++L++ +++DN +
Sbjct: 180 YVKYLVQVANEKMEANWNRTDRFLRLLQNN---GSMVNDNSNRLSQRTGVELVCDNLQFD 236
Query: 479 XXVRLVVGECDSEKAEVDAHLGLGAHHCSISVTKLVTVGEPVEKIFLWGHSVSILDDKHR 300
++ G ++ +G+ S+ + + VGEPVEK+FLWGHS LD+
Sbjct: 237 HESQITNGNAPKNESGF-----VGSPGFSLPIAHIEVVGEPVEKLFLWGHSACALDNADH 291
Query: 299 RKVLIFGGFGGIGRHARRSETLLLDTQSGILEAANFE--RSPSPRMGHTSSVVGESVFVI 126
+KV++FGGFGG+GRHARR++ LLLD S LE + PSPR+GHT+S+VG+ +FVI
Sbjct: 292 KKVIVFGGFGGLGRHARRNDLLLLDPYSFNLETIDTSGCACPSPRLGHTASLVGDLMFVI 351
Query: 125 GGRGDPLNILDDFWVFDVAKNEWRLLECAGSVFPPRHRHAA 3
GGR P IL+D W FD KN W+LL+C GSVFPPRHRHAA
Sbjct: 352 GGRTGPDKILNDVWSFDTTKNCWKLLQCGGSVFPPRHRHAA 392