BLASTX nr result
ID: Cocculus23_contig00028036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00028036
(311 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007009734.1| Ribosomal protein S12/S23 family protein iso... 68 1e-09
ref|XP_007009733.1| Ribosomal protein S12/S23 family protein iso... 68 1e-09
emb|CBI32689.3| unnamed protein product [Vitis vinifera] 68 1e-09
emb|CBI31516.3| unnamed protein product [Vitis vinifera] 68 1e-09
emb|CBI16256.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [V... 68 1e-09
ref|XP_002284863.1| PREDICTED: 40S ribosomal protein S23-like [V... 68 1e-09
emb|CAN75084.1| hypothetical protein VITISV_024242 [Vitis vinifera] 68 1e-09
tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, parti... 68 2e-09
ref|XP_002311115.1| putative 40S ribosomal protein s12 [Populus ... 67 3e-09
gb|EXC19487.1| 40S ribosomal protein S23 [Morus notabilis] 66 4e-09
gb|EXC16274.1| 40S ribosomal protein S23 [Morus notabilis] 66 4e-09
ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group] g... 66 4e-09
gb|EMS58293.1| 40S ribosomal protein S23 [Triticum urartu] 66 4e-09
gb|EMS46402.1| 40S ribosomal protein S23 [Triticum urartu] 66 4e-09
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C... 66 4e-09
gb|AFW82264.1| hypothetical protein ZEAMMB73_128218 [Zea mays] 66 4e-09
gb|AFW75542.1| hypothetical protein ZEAMMB73_420601 [Zea mays] 66 4e-09
gb|AFW67172.1| PHD finger protein [Zea mays] 66 4e-09
gb|ADJ67168.1| ribosomal protein S23 [Jatropha curcas] 66 4e-09
>ref|XP_007009734.1| Ribosomal protein S12/S23 family protein isoform 2, partial
[Theobroma cacao] gi|508726647|gb|EOY18544.1| Ribosomal
protein S12/S23 family protein isoform 2, partial
[Theobroma cacao]
Length = 116
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 54
>ref|XP_007009733.1| Ribosomal protein S12/S23 family protein isoform 1 [Theobroma
cacao] gi|590630367|ref|XP_007027252.1| Ribosomal
protein S12/S23 family protein [Theobroma cacao]
gi|508715857|gb|EOY07754.1| Ribosomal protein S12/S23
family protein [Theobroma cacao]
gi|508726646|gb|EOY18543.1| Ribosomal protein S12/S23
family protein isoform 1 [Theobroma cacao]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 54
>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
Length = 189
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 70 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 101
>emb|CBI31516.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 79 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 110
>emb|CBI16256.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 56 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 87
>ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 54
>ref|XP_002284863.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
gi|225449164|ref|XP_002278466.1| PREDICTED: 40S
ribosomal protein S23-like [Vitis vinifera]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 54
>emb|CAN75084.1| hypothetical protein VITISV_024242 [Vitis vinifera]
Length = 143
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 24 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 55
>tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, partial [Zea mays]
Length = 109
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKM
Sbjct: 78 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 109
>ref|XP_002311115.1| putative 40S ribosomal protein s12 [Populus trichocarpa]
gi|224112945|ref|XP_002316341.1| putative 40S ribosomal
protein s12 [Populus trichocarpa]
gi|224140159|ref|XP_002323452.1| 40s ribosomal protein
S23 [Populus trichocarpa]
gi|566176125|ref|XP_006381492.1| 40s ribosomal protein
S23 [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
unknown [Populus trichocarpa]
gi|118484067|gb|ABK93919.1| unknown [Populus
trichocarpa] gi|118487579|gb|ABK95615.1| unknown
[Populus trichocarpa] gi|222850935|gb|EEE88482.1|
putative 40S ribosomal protein s12 [Populus trichocarpa]
gi|222865381|gb|EEF02512.1| putative 40S ribosomal
protein s12 [Populus trichocarpa]
gi|222868082|gb|EEF05213.1| 40s ribosomal protein S23
[Populus trichocarpa] gi|550336196|gb|ERP59289.1| 40s
ribosomal protein S23 [Populus trichocarpa]
Length = 142
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADK+YKKSNLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKI 54
>gb|EXC19487.1| 40S ribosomal protein S23 [Morus notabilis]
Length = 233
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 97 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 128
>gb|EXC16274.1| 40S ribosomal protein S23 [Morus notabilis]
Length = 179
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 60 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 91
>ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group]
gi|115456215|ref|NP_001051708.1| Os03g0818400 [Oryza
sativa Japonica Group] gi|297720551|ref|NP_001172637.1|
Os01g0834601 [Oryza sativa Japonica Group]
gi|357125752|ref|XP_003564554.1| PREDICTED: 40S
ribosomal protein S23-like [Brachypodium distachyon]
gi|357133327|ref|XP_003568277.1| PREDICTED: 40S
ribosomal protein S23-like [Brachypodium distachyon]
gi|573914602|ref|XP_006644968.1| PREDICTED: 40S
ribosomal protein S23-like [Oryza brachyantha]
gi|573944341|ref|XP_006654522.1| PREDICTED: 40S
ribosomal protein S23-like [Oryza brachyantha]
gi|582044863|pdb|3J60|X Chain X, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|20805266|dbj|BAB92932.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|20805267|dbj|BAB92933.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|21671347|dbj|BAC02683.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|21671348|dbj|BAC02684.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|28876025|gb|AAO60034.1| 40S ribosomal protein S23
[Oryza sativa Japonica Group] gi|29124115|gb|AAO65856.1|
40S ribosomal protein S23 [Oryza sativa Japonica Group]
gi|108711771|gb|ABF99566.1| 40S ribosomal protein S23,
putative, expressed [Oryza sativa Japonica Group]
gi|113534251|dbj|BAF06634.1| Os01g0834500 [Oryza sativa
Japonica Group] gi|113550179|dbj|BAF13622.1|
Os03g0818400 [Oryza sativa Japonica Group]
gi|125528286|gb|EAY76400.1| hypothetical protein
OsI_04329 [Oryza sativa Indica Group]
gi|125546216|gb|EAY92355.1| hypothetical protein
OsI_14082 [Oryza sativa Indica Group]
gi|215697420|dbj|BAG91414.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215734943|dbj|BAG95665.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255673847|dbj|BAH91367.1| Os01g0834601 [Oryza sativa
Japonica Group] gi|326501134|dbj|BAJ98798.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326506086|dbj|BAJ91282.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475471084|gb|EMT02409.1| 40S
ribosomal protein S23 [Aegilops tauschii]
gi|475559749|gb|EMT13416.1| 40S ribosomal protein S23
[Aegilops tauschii] gi|475589092|gb|EMT21069.1| 40S
ribosomal protein S23 [Aegilops tauschii]
Length = 142
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54
>gb|EMS58293.1| 40S ribosomal protein S23 [Triticum urartu]
Length = 202
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 83 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 114
>gb|EMS46402.1| 40S ribosomal protein S23 [Triticum urartu]
Length = 172
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54
>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
Length = 142
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54
>gb|AFW82264.1| hypothetical protein ZEAMMB73_128218 [Zea mays]
Length = 97
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54
>gb|AFW75542.1| hypothetical protein ZEAMMB73_420601 [Zea mays]
Length = 110
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 62 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 93
>gb|AFW67172.1| PHD finger protein [Zea mays]
Length = 1166
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54
>gb|ADJ67168.1| ribosomal protein S23 [Jatropha curcas]
Length = 156
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 1 ADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKM 96
ADKAYKKS+LGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 23 ADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54