BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027950
         (646 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   201   1e-49
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   188   1e-45
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...   179   7e-43
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...   179   7e-43
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...   179   7e-43
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin...   179   7e-43
ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA...   179   7e-43
ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA...   179   7e-43
ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prun...   178   1e-42
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo...   159   5e-37
ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containin...   153   4e-35
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin...   153   5e-35
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A...   150   2e-34
ref|XP_002320513.1| RNA recognition motif-containing family prot...   139   1e-30
ref|XP_002302838.2| RNA recognition motif-containing family prot...   136   5e-30
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...   133   5e-29
ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prun...   127   3e-27
ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containin...   127   4e-27
ref|XP_007020606.1| RNA binding protein, putative isoform 3, par...   124   2e-26
ref|XP_007020605.1| RNA binding protein, putative isoform 2 [The...   124   2e-26

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  201 bits (512), Expect = 1e-49
 Identities = 96/174 (55%), Positives = 129/174 (74%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTKVV+NRIQ LEPENVSKIIG+LLLQDHSEREMIRLAF PDNLI+SLI +AK++
Sbjct: 1   MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL+ KP +S  + P+ +   P+SD+P+QFTPF+PAS    SSPA +    + YW+++  
Sbjct: 61  LGLN-KPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVT 119

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            DQQ + N+DF  P Y +++ +DYRL N  Q+  L+D  E  +++  DF SN +
Sbjct: 120 GDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYF 173


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  188 bits (477), Expect = 1e-45
 Identities = 97/175 (55%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTKVV+NRIQ LEPENVSKIIG+LLLQDH ER+MIR AF  DN I  LI++AK E
Sbjct: 1   MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGLS KP VS  + P  + P P+SD+P+QFTPF+PAS R F SP      G  YW+ +  
Sbjct: 61  LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSP----RPGNSYWDPQVN 116

Query: 485 TDQQLIHNM-DFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            DQQ +H + DF+P  Y +S+ DD+RL +Q  +  +ED LE  N++G +F  + Y
Sbjct: 117 GDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYY 169


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X4 [Citrus sinensis]
          Length = 578

 Score =  179 bits (454), Expect = 7e-43
 Identities = 90/175 (51%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTK V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI+SLI+ AK +
Sbjct: 1   MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL  KP VSP + P +     ++D+P+QF PF+PASTR  SSPA+     +P+W+ +  
Sbjct: 61  LGLG-KPTVSPPISPAS-----VADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114

Query: 485 TD-QQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            D QQ +++++F+ P Y ++ ++D+ L NQ Q+  LED  +  N++  DF S+ +
Sbjct: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYF 169


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X3 [Citrus sinensis]
          Length = 579

 Score =  179 bits (454), Expect = 7e-43
 Identities = 90/175 (51%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTK V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI+SLI+ AK +
Sbjct: 1   MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL  KP VSP + P +     ++D+P+QF PF+PASTR  SSPA+     +P+W+ +  
Sbjct: 61  LGLG-KPTVSPPISPAS-----VADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114

Query: 485 TD-QQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            D QQ +++++F+ P Y ++ ++D+ L NQ Q+  LED  +  N++  DF S+ +
Sbjct: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYF 169


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X2 [Citrus sinensis]
          Length = 581

 Score =  179 bits (454), Expect = 7e-43
 Identities = 90/175 (51%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTK V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI+SLI+ AK +
Sbjct: 1   MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL  KP VSP + P +     ++D+P+QF PF+PASTR  SSPA+     +P+W+ +  
Sbjct: 61  LGLG-KPTVSPPISPAS-----VADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114

Query: 485 TD-QQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            D QQ +++++F+ P Y ++ ++D+ L NQ Q+  LED  +  N++  DF S+ +
Sbjct: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYF 169


>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X1 [Citrus sinensis]
          Length = 582

 Score =  179 bits (454), Expect = 7e-43
 Identities = 90/175 (51%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTK V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PD+LI+SLI+ AK +
Sbjct: 1   MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL  KP VSP + P +     ++D+P+QF PF+PASTR  SSPA+     +P+W+ +  
Sbjct: 61  LGLG-KPTVSPPISPAS-----VADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMA 114

Query: 485 TD-QQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            D QQ +++++F+ P Y ++ ++D+ L NQ Q+  LED  +  N++  DF S+ +
Sbjct: 115 ADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYF 169


>ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 4, partial [Theobroma cacao]
           gi|508701581|gb|EOX93477.1| CCCH-type zinc fingerfamily
           protein with RNA-binding domain, putative isoform 4,
           partial [Theobroma cacao]
          Length = 430

 Score =  179 bits (454), Expect = 7e-43
 Identities = 88/174 (50%), Positives = 130/174 (74%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTKVV+NRIQ LEPENVSKIIG+ LLQD  +R+MIRLAF  D L+ SLI++AK+E
Sbjct: 1   MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           L L+ K  VS  + P+ + P P++D+P+QFTP++PAS+   S+PA T    +P+W+ + +
Sbjct: 61  LSLN-KSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSCTVSTPA-TIRASSPFWDPQ-V 117

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
           T +Q ++N++F+PP Y +++++DY L NQ  + N+ D LE  N++  +FLSN Y
Sbjct: 118 TAEQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLESANSVSSEFLSNYY 171


>ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
           gi|590712174|ref|XP_007049318.1| CCCH-type zinc
           fingerfamily protein with RNA-binding domain, putative
           isoform 1 [Theobroma cacao]
           gi|590712177|ref|XP_007049319.1| CCCH-type zinc
           fingerfamily protein with RNA-binding domain, putative
           isoform 1 [Theobroma cacao] gi|508701578|gb|EOX93474.1|
           CCCH-type zinc fingerfamily protein with RNA-binding
           domain, putative isoform 1 [Theobroma cacao]
           gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
           protein with RNA-binding domain, putative isoform 1
           [Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
           zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
          Length = 545

 Score =  179 bits (454), Expect = 7e-43
 Identities = 88/174 (50%), Positives = 130/174 (74%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDF+ESTKVV+NRIQ LEPENVSKIIG+ LLQD  +R+MIRLAF  D L+ SLI++AK+E
Sbjct: 1   MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           L L+ K  VS  + P+ + P P++D+P+QFTP++PAS+   S+PA T    +P+W+ + +
Sbjct: 61  LSLN-KSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSCTVSTPA-TIRASSPFWDPQ-V 117

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
           T +Q ++N++F+PP Y +++++DY L NQ  + N+ D LE  N++  +FLSN Y
Sbjct: 118 TAEQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLESANSVSSEFLSNYY 171


>ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
           gi|462411471|gb|EMJ16520.1| hypothetical protein
           PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score =  178 bits (451), Expect = 1e-42
 Identities = 98/175 (56%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTKVV+NRIQ +EPENVSKIIG+LLLQDH ER+MIRLAF PDNLI SLI++AKTE
Sbjct: 1   MDFSESTKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKAKTE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL  K  VS  + P+ +  VP+SD P+QFTP+TP  TR  SSP T      P+ + +  
Sbjct: 61  LGLC-KLAVSAPISPSQVNQVPVSDPPLQFTPYTPNLTRPISSP-TPLGAVNPFRDPQLP 118

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSN-CY 646
            DQQ + N++F+PP Y +S  +DYRL NQ Q+              PDF SN CY
Sbjct: 119 GDQQPLQNVEFVPPGYSDSAIEDYRLQNQMQFL-------------PDFSSNYCY 160


>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 557

 Score =  159 bits (403), Expect = 5e-37
 Identities = 85/174 (48%), Positives = 109/174 (62%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTK+V+NRIQ LEPENVSKIIG+LLLQDH ER+MIRLAF PDNL+HSLI RAKTE
Sbjct: 1   MDFSESTKIVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLMHSLITRAKTE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGLS K  V   + P+ +  +P+ D+P+QF  +TP S R              YW+    
Sbjct: 61  LGLSSKSPVPAPISPSQVNQIPVLDIPLQFQSYTPVSARP-----------NYYWD---- 105

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
                 HN + +   Y +S ++++ L NQ    +LED LE   ++  DF S  Y
Sbjct: 106 ------HNAEVINQGYVDSTAENFHLQNQLHLLSLEDPLESACSVSSDFSSGYY 153


>ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X1 [Solanum tuberosum]
           gi|565394754|ref|XP_006363021.1| PREDICTED: zinc finger
           CCCH domain-containing protein 18-like isoform X2
           [Solanum tuberosum]
          Length = 531

 Score =  153 bits (387), Expect = 4e-35
 Identities = 82/172 (47%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
 Frame = +2

Query: 119 VKMDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAK 298
           + MDFSESTKVV+NRIQ LE E+VSKIIG+LL +DH E++MIRLAF PDN+IHSLI++AK
Sbjct: 1   MSMDFSESTKVVYNRIQKLESEHVSKIIGYLLYRDHGEQDMIRLAFCPDNVIHSLINKAK 60

Query: 299 TELGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESR 478
             LGLSPKP +S  + P           P++F  F+ AS R    P T   +G PYWE +
Sbjct: 61  NSLGLSPKPAISGPLSP-----------PLKFGLFSSASPR----PFTNHQLGNPYWEHQ 105

Query: 479 ALTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLE---LGNAMGP 625
              + + IHN+D LP    + ++D+++L NQ Q+ +L+D  +   +G   GP
Sbjct: 106 GPAENRPIHNLDLLPVGCSDPMTDEHQLQNQLQFLSLDDHSDHNFVGRTFGP 157


>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Fragaria vesca subsp. vesca]
          Length = 566

 Score =  153 bits (386), Expect = 5e-35
 Identities = 86/175 (49%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTKVV++RIQ L+PENV KIIG LLLQ+H ER MIRLAF PDNLI S+I++AKTE
Sbjct: 1   MDFSESTKVVYSRIQKLDPENVGKIIGILLLQEHGERNMIRLAFSPDNLIQSVINKAKTE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           L    K +VS  + P+ +  V +SD+P+QFTP++P+ TR  S P T         E++  
Sbjct: 61  L---CKHVVSSPISPSQVNQVAVSDLPMQFTPYSPSLTRPISCPTTLGAANPFSREAQVA 117

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSN-CY 646
            DQQ +  +DF+PP Y +S ++DY L +    F             PDF SN CY
Sbjct: 118 GDQQPLQAVDFIPPGYLDSAAEDYCLQSHQMQFL------------PDFSSNICY 160


>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
           gi|548839320|gb|ERM99613.1| hypothetical protein
           AMTR_s00088p00158600 [Amborella trichopoda]
          Length = 575

 Score =  150 bits (380), Expect = 2e-34
 Identities = 86/175 (49%), Positives = 116/175 (66%)
 Frame = +2

Query: 122 KMDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKT 301
           +MDF EST+ VF+RIQ LEPENVSKI+G+LLL+D+ EREM  LA  PD+LI SLI++AK+
Sbjct: 9   EMDF-ESTRTVFSRIQKLEPENVSKIVGYLLLRDNGEREMNELAVCPDSLIISLINKAKS 67

Query: 302 ELGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRA 481
           ELGL+ KP +S  +P  +      SD+P+ FTPF+ +++R FSSPAT      PYWE + 
Sbjct: 68  ELGLASKPQISTQIPQNSFN----SDLPLPFTPFSLSTSRPFSSPAT---FAPPYWEHQP 120

Query: 482 LTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
            TDQQ + N+D + P       ++YR  NQ     L+D LE  N +G + L N Y
Sbjct: 121 GTDQQALLNLDLVSP-------EEYRFQNQAHSLGLDDQLEPVNPLGAE-LQNEY 167


>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 554

 Score =  139 bits (349), Expect = 1e-30
 Identities = 78/174 (44%), Positives = 107/174 (61%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTKVV+NRIQ +EPE V KIIG++LLQ+H EREMIRLAF PDNLI++ I +AK++
Sbjct: 1   MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL+  P+ +P + P+ + P P+SDV +QF P T  S+   SSP      G+ +W+++  
Sbjct: 61  LGLNKTPVPNP-ISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGS-FWDAQV- 117

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
                                 DYRL NQ Q+   +D LE  N+   DF S+ +
Sbjct: 118 ---------------------TDYRLQNQMQFLTSDDQLEFVNS---DFSSSYF 147


>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 391

 Score =  136 bits (343), Expect = 5e-30
 Identities = 76/172 (44%), Positives = 106/172 (61%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSESTKVV+NRIQA+EPE V KIIG++L+Q+H EREMIRLAF PDNLI+++I +AK++
Sbjct: 1   MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           LGL+  P+++  + P+ + P P+SDVP QF P +  S+    SP      G         
Sbjct: 61  LGLNKIPVLN-LISPSQVNPSPVSDVPQQFIPNSTVSSHPIFSPVKVRTAG--------- 110

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSN 640
                          Y E + +DYR+ NQ Q+  L+D +E  N+   DF S+
Sbjct: 111 ---------------YSEMVPEDYRIQNQMQFLALDDPIEFVNS---DFSSS 144


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
           gi|223531534|gb|EEF33365.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 551

 Score =  133 bits (334), Expect = 5e-29
 Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSE T+VVFN+I+ +EPENV+KIIG+LLLQD S++EMI LA  PD +I  +I +AK E
Sbjct: 1   MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRAL 484
           L        +  + P+   P  +S+   QF  F+P S+R++ SP   F V + YWES+  
Sbjct: 61  LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSP-QHFRVPSTYWESQVA 119

Query: 485 TDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLE---LGNAMGPDFL 634
           +     H+ DF+P  Y +S+++   L NQ Q+ +LED LE   LGNA  P  L
Sbjct: 120 SK----HSSDFVPMTYQDSMTE---LQNQAQFLSLEDQLESVNLGNAGFPSDL 165


>ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
           gi|462409724|gb|EMJ15058.1| hypothetical protein
           PRUPE_ppa019338mg [Prunus persica]
          Length = 564

 Score =  127 bits (319), Expect = 3e-27
 Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           MDFSE T  V++RIQ LEP+N +KIIG+LLLQD+ E+EM RLA  P++LIH +I +AKTE
Sbjct: 1   MDFSEYTNAVYSRIQKLEPDNATKIIGYLLLQDYGEQEMARLAMAPEHLIHQVIVKAKTE 60

Query: 305 L-GLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWESRA 481
           L  L+ K + SP  P        ++ V   F P+ P S+R FSSPA    V   +W+++ 
Sbjct: 61  LQQLAAKSVASPISP-------SLNPVTGAFAPYLPVSSRPFSSPA-AIRVPTAFWDAQL 112

Query: 482 LTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
           +  Q    + DF+P  YP+SI++   L NQ Q+ +LED +E  N+ G    SN Y
Sbjct: 113 VAKQ----SPDFMPLGYPDSIAE---LQNQAQFLSLEDQIEPLNS-GISGFSNDY 159


>ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Solanum lycopersicum]
          Length = 532

 Score =  127 bits (318), Expect = 4e-27
 Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
 Frame = +2

Query: 119 VKMDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAK 298
           + M+FSEST+ V+NRIQ LEP++V+KII +L+ Q H E++MIRLAF P+N+I S++++AK
Sbjct: 1   MSMNFSESTRDVYNRIQKLEPDHVNKIIVYLIDQHHGEQDMIRLAFSPENVIRSIVNKAK 60

Query: 299 TELG-LSPKPMVSPAVPPTTMKPVPISDVPIQFTPFTPASTRAFSSPATTFHVGAPYWES 475
            +LG LSPKP +S  + P           P++F  F+ AS R    P T   VG  YWE 
Sbjct: 61  NDLGLLSPKPAISGPLSP-----------PLKFGLFSSASPR----PFTNHQVGNLYWEH 105

Query: 476 RALTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLE---LGNAMGP 625
           +   + + IH+ D LP    + ++D+Y+L NQ  + +L D  +   +G   GP
Sbjct: 106 QGQAENRPIHSSDILPAGCSDPMTDEYQLQNQLHFLSLYDHSDHNFVGRTFGP 158


>ref|XP_007020606.1| RNA binding protein, putative isoform 3, partial [Theobroma cacao]
           gi|508720234|gb|EOY12131.1| RNA binding protein,
           putative isoform 3, partial [Theobroma cacao]
          Length = 507

 Score =  124 bits (312), Expect = 2e-26
 Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           M+FS+ T+V+FNRI  LEPEN +K+IG LLLQ + ++EM++LA  PD +I  +I +AK E
Sbjct: 1   MEFSDCTRVLFNRIWKLEPENAAKVIGILLLQGYGDQEMVQLAMCPDMVIQEVIYKAKAE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFT-PASTRAFSSPATTFHVGAPYWESRA 481
           L   P    SP + P +M   P S+ P QFT F+ P S+R F SP  +F V +PYWE + 
Sbjct: 61  LQQLPLKSGSPPISP-SMNSAPGSEFPSQFTSFSPPVSSRPFLSP-RSFQVTSPYWEQQL 118

Query: 482 LTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
                  HN DF+P  Y +S S+   L +Q+Q  +LE+ +E  N +G    SN Y
Sbjct: 119 AAK----HNSDFMPSAYLDSASE---LQSQSQLLSLEEQIESLN-LGNGGFSNDY 165


>ref|XP_007020605.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
           gi|508720233|gb|EOY12130.1| RNA binding protein,
           putative isoform 2 [Theobroma cacao]
          Length = 569

 Score =  124 bits (312), Expect = 2e-26
 Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 MDFSESTKVVFNRIQALEPENVSKIIGFLLLQDHSEREMIRLAFGPDNLIHSLIDRAKTE 304
           M+FS+ T+V+FNRI  LEPEN +K+IG LLLQ + ++EM++LA  PD +I  +I +AK E
Sbjct: 1   MEFSDCTRVLFNRIWKLEPENAAKVIGILLLQGYGDQEMVQLAMCPDMVIQEVIYKAKAE 60

Query: 305 LGLSPKPMVSPAVPPTTMKPVPISDVPIQFTPFT-PASTRAFSSPATTFHVGAPYWESRA 481
           L   P    SP + P +M   P S+ P QFT F+ P S+R F SP  +F V +PYWE + 
Sbjct: 61  LQQLPLKSGSPPISP-SMNSAPGSEFPSQFTSFSPPVSSRPFLSP-RSFQVTSPYWEQQL 118

Query: 482 LTDQQLIHNMDFLPPVYPESISDDYRLHNQTQYFNLEDLLELGNAMGPDFLSNCY 646
                  HN DF+P  Y +S S+   L +Q+Q  +LE+ +E  N +G    SN Y
Sbjct: 119 AAK----HNSDFMPSAYLDSASE---LQSQSQLLSLEEQIESLN-LGNGGFSNDY 165