BLASTX nr result
ID: Cocculus23_contig00027917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027917
(275 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-... 50 2e-15
gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 3e-15
gb|AAV24823.1| putative polyprotein [Oryza sativa Japonica Group] 47 4e-15
emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group] 50 5e-15
emb|CAE05378.1| OSJNBa0022F16.2 [Oryza sativa Japonica Group] gi... 48 1e-14
gb|AAX96596.1| retrotransposon protein, putative, Ty3-gypsy sub-... 48 1e-14
gb|ABA97246.2| retrotransposon protein, putative, Ty3-gypsy subc... 48 1e-14
emb|CAE05072.2| OSJNBa0094P09.11 [Oryza sativa Japonica Group] 48 1e-14
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 50 1e-14
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 50 1e-14
emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group] 50 1e-14
emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group] 50 1e-14
gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group] 50 1e-14
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subc... 50 1e-14
emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group] gi... 50 1e-14
>gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550173|gb|ABA92970.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1509
Score = 50.1 bits (118), Expect(3) = 2e-15
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR KV L
Sbjct: 743 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKVDL 777
Score = 44.7 bits (104), Expect(3) = 2e-15
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
++DLR GYHQL+IR ED+P AF TRY
Sbjct: 774 KVDLRSGYHQLKIRSEDIPKTAFSTRY 800
Score = 32.3 bits (72), Expect(3) = 2e-15
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNAL FM+LM++
Sbjct: 804 EFTVMSFGLTNALAFFMNLMNK 825
>gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 49.7 bits (117), Expect(3) = 3e-15
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 634 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 668
Score = 47.4 bits (111), Expect(3) = 3e-15
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLRLGYHQL+IR ED+P AF TRY
Sbjct: 665 KIDLRLGYHQLKIRSEDIPKTAFSTRY 691
Score = 29.6 bits (65), Expect(3) = 3e-15
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 695 EFTVMSFGLTNAPAFFMNLMNK 716
>gb|AAV24823.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1374
Score = 47.0 bits (110), Expect(3) = 4e-15
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP IDDLFDQL+GA+ K+ L
Sbjct: 527 RALNEVTIKNKYPLPLIDDLFDQLKGAKVFSKIDL 561
Score = 47.0 bits (110), Expect(3) = 4e-15
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQLRIR+ED+P AF TRY
Sbjct: 558 KIDLRSGYHQLRIREEDIPKTAFTTRY 584
Score = 32.3 bits (72), Expect(3) = 4e-15
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNAL FM+LM++
Sbjct: 588 ECTVMSFGLTNALAFFMNLMNK 609
>emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
Length = 1831
Score = 49.7 bits (117), Expect(3) = 5e-15
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 984 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1018
Score = 45.1 bits (105), Expect(3) = 5e-15
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1015 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1041
Score = 31.2 bits (69), Expect(3) = 5e-15
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA V FM+LM++
Sbjct: 1045 EFTVMSFGLTNAPVFFMNLMNK 1066
>emb|CAE05378.1| OSJNBa0022F16.2 [Oryza sativa Japonica Group]
gi|38346701|emb|CAE02186.2| OSJNBa0080E14.17 [Oryza
sativa Japonica Group]
Length = 1494
Score = 48.1 bits (113), Expect(3) = 1e-14
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = -2
Query: 274 EALYKLQAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
E L + A+ VT+KNKYPLP+IDDLFDQL+GA K+ L
Sbjct: 866 EELKEKGALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 906
Score = 47.0 bits (110), Expect(3) = 1e-14
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQLRIR+ED+P AF TRY
Sbjct: 903 KIDLRSGYHQLRIREEDIPKTAFTTRY 929
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 933 EFTVMSFGLTNAPAFFMNLMNK 954
>gb|AAX96596.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|108864323|gb|ABA93205.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1255
Score = 48.1 bits (113), Expect(3) = 1e-14
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = -2
Query: 274 EALYKLQAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
E L + A+ VT+KNKYPLP+IDDLFDQL+GA K+ L
Sbjct: 369 EELKEKGALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 409
Score = 47.0 bits (110), Expect(3) = 1e-14
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQLRIR+ED+P AF TRY
Sbjct: 406 KIDLRSGYHQLRIREEDIPKTAFTTRY 432
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 436 EFTVMSFGLTNAPAFFMNLMNK 457
>gb|ABA97246.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1225
Score = 48.1 bits (113), Expect(3) = 1e-14
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = -2
Query: 274 EALYKLQAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
E L + A+ VT+KNKYPLP+IDDLFDQL+GA K+ L
Sbjct: 350 EELKEKGALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 390
Score = 47.0 bits (110), Expect(3) = 1e-14
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQLRIR+ED+P AF TRY
Sbjct: 387 KIDLRSGYHQLRIREEDIPKTAFTTRY 413
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 417 EFTVMSFGLTNAPAFFMNLMNK 438
>emb|CAE05072.2| OSJNBa0094P09.11 [Oryza sativa Japonica Group]
Length = 976
Score = 48.1 bits (113), Expect(3) = 1e-14
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2
Query: 274 EALYKLQAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A +A+ VT+KNKYPLP+IDDLFDQL+GA K+ L
Sbjct: 90 DATVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 130
Score = 47.0 bits (110), Expect(3) = 1e-14
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQLRIR+ED+P AF TRY
Sbjct: 127 KIDLRSGYHQLRIREEDIPKTAFTTRY 153
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 157 EFTVMSFGLTNAPAFFMNLMNK 178
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 1008 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1042
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1039 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1065
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1069 EFTVMSFGLTNAPAFFMNLMNK 1090
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 982 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1016
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1039
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1043 EFTVMSFGLTNAPAFFMNLMNK 1064
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 982 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1016
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1039
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1043 EFTVMSFGLTNAPAFFMNLMNK 1064
>emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 982 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1016
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1039
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1043 EFTVMSFGLTNAPAFFMNLMNK 1064
>emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 982 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1016
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1039
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1043 EFTVMSFGLTNAPAFFMNLMNK 1064
>gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1829
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 982 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1016
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1039
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1043 EFTVMSFGLTNAPTFFMNLMNK 1064
>gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1824
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 985 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 1019
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 1016 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1042
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1046 EFTVMSFGLTNAPAFFMNLMNK 1067
>emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group]
Length = 1820
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 952 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 986
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 983 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1009
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1013 EFTVMSFGLTNAPAFFMNLMNK 1034
>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 938 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 972
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 969 KIDLRSGYHQLKIRSEDIPKTAFSTRY 995
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 999 EFTVMSFGLTNAPAFFMNLMNK 1020
>gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 952 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 986
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 983 KIDLRSGYHQLKIRSEDIPKTAFSTRY 1009
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1013 EFTVMSFGLTNAPAFFMNLMNK 1034
>gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 907 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 941
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 938 KIDLRSGYHQLKIRSEDIPKTAFSTRY 964
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 968 EFTVMSFGLTNAPAFFMNLMNK 989
>emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group]
gi|38347324|emb|CAE05974.2| OSJNBa0063C18.15 [Oryza
sativa Japonica Group]
Length = 1764
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2
Query: 256 QAVE*VTVKNKYPLPKIDDLFDQLRGARD*PKVRL 152
+A+ VT+KNKYPLP+IDDLFDQL+GAR K+ L
Sbjct: 939 RALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDL 973
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 174 EIDLRLGYHQLRIRDEDVPNIAFRTRY 94
+IDLR GYHQL+IR ED+P AF TRY
Sbjct: 970 KIDLRSGYHQLKIRSEDIPKTAFSTRY 996
Score = 29.6 bits (65), Expect(3) = 1e-14
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 86 EVSVMPFGLTNALVMFMDLMHR 21
E +VM FGLTNA FM+LM++
Sbjct: 1000 EFTVMSFGLTNAPAFFMNLMNK 1021