BLASTX nr result

ID: Cocculus23_contig00027868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027868
         (528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    41   4e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%)
 Frame = -2

Query: 470  SLAYFFTIKLDHMIYIINLLQSSLIFSFNSCKTNSCLVRWVPPLTCSSCLNTDGSLSSFR 291
            S  + F IK+++    IN      IF  +    N   V W+ P T  + LNTDGS  + R
Sbjct: 958  SAEHIFMIKVENSWENINQ-----IFDVSINHKNVIRVNWIKPPTMFAKLNTDGSCVNGR 1012

Query: 290  GGYGGLIRDPNGFPLLAF 237
             G GG++R+  G  ++AF
Sbjct: 1013 CGGGGILRNALGQVIMAF 1030



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = -3

Query: 235  QGPSSVIEMGCKALLEGINLAIFLAISNVQSQCDSLQLIRFVNDKRVTPW*M-MEIKTLL 59
            +G SS  E    ++L G+ L I   ++ +  + DS+ L + + +    PW M + +K + 
Sbjct: 1036 EGTSSWAE--AMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQ 1093

Query: 58   KRFASFSYI--YIFREANQPA 2
            K      +I  +  REANQPA
Sbjct: 1094 KMVEEHGFIINHCLREANQPA 1114


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