BLASTX nr result

ID: Cocculus23_contig00027733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00027733
         (921 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [A...    78   4e-12
ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [A...    74   1e-10
ref|XP_006849382.1| hypothetical protein AMTR_s00158p00090260 [A...    72   3e-10
ref|XP_006282494.1| hypothetical protein CARUB_v10006484mg [Caps...    66   2e-08
ref|NP_198787.1| pentatricopeptide repeat-containing protein EMB...    65   3e-08
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...    65   5e-08
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi...    64   8e-08
ref|XP_006371854.1| pentatricopeptide repeat-containing family p...    63   1e-07
ref|XP_007133763.1| hypothetical protein PHAVU_011G207000g [Phas...    61   5e-07
ref|XP_006405601.1| hypothetical protein EUTSA_v10027654mg [Eutr...    61   5e-07
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi...    61   7e-07
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    61   7e-07
emb|CBI34098.3| unnamed protein product [Vitis vinifera]               61   7e-07
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    61   7e-07
ref|XP_006352878.1| PREDICTED: pentatricopeptide repeat-containi...    60   9e-07
ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containi...    60   9e-07
ref|XP_006339078.1| PREDICTED: pentatricopeptide repeat-containi...    60   9e-07
ref|XP_006339077.1| PREDICTED: pentatricopeptide repeat-containi...    60   9e-07
ref|XP_007224975.1| hypothetical protein PRUPE_ppa020759mg, part...    60   9e-07
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    60   9e-07

>ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [Amborella trichopoda]
           gi|548852702|gb|ERN10796.1| hypothetical protein
           AMTR_s00027p00227320 [Amborella trichopoda]
          Length = 704

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 36/83 (43%), Positives = 56/83 (67%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G   EA E+  KM++  V +DH+P+ ILI KYC  ++ + A++LYEEM   GL S+  TY
Sbjct: 616 GETHEAHELLVKMKKMDVPLDHVPYHILITKYCKEKQLDIAFDLYEEMSEKGLRSKACTY 675

Query: 740 CALISALSRKGLMQKAMLVHNDM 672
             LI+ L++KGL ++A+ V++ M
Sbjct: 676 RTLITELTKKGLFKEALQVYHSM 698



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 27/89 (30%), Positives = 54/89 (60%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           GN+ +A+E++ +M R G ++D + + ++I  +C   +   AY  + EMF+ G++    TY
Sbjct: 371 GNMLKALELWDEMLRKGTLVDVVSYNVIINGFCMGGDMSFAYKFFSEMFKKGISPNIVTY 430

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLM 654
             LI+   R+G + +A ++H+ M S G++
Sbjct: 431 STLINGHCREGKLVEAWIMHSKMSSNGVL 459


>ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [Amborella trichopoda]
           gi|548836472|gb|ERM97665.1| hypothetical protein
           AMTR_s00130p00090930 [Amborella trichopoda]
          Length = 654

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 35/83 (42%), Positives = 53/83 (63%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G   EA E+  KM++  V +DH+P+ ILI KYC  ++   A++LYEEM   GL S+  TY
Sbjct: 566 GKTHEAHELLVKMKKMDVPLDHVPYHILITKYCKEKQLNIAFDLYEEMSEKGLRSKACTY 625

Query: 740 CALISALSRKGLMQKAMLVHNDM 672
             LI  L++KG  ++A+ V++ M
Sbjct: 626 HTLIVELTKKGHFKEALQVYHSM 648



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 28/89 (31%), Positives = 55/89 (61%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           GN+ +A E++ +M R G+++D + + ++IK +C   +   AY  + EMF+ G++    TY
Sbjct: 321 GNMLKARELWDEMLRKGILVDVVSYNVIIKGFCMGGDMSFAYKFFSEMFKKGISPDIVTY 380

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLM 654
             LI+   R+G + +A ++H+ M S G++
Sbjct: 381 NTLINGHCREGKLVEAWIMHSKMSSNGVL 409


>ref|XP_006849382.1| hypothetical protein AMTR_s00158p00090260 [Amborella trichopoda]
           gi|548852929|gb|ERN10963.1| hypothetical protein
           AMTR_s00158p00090260 [Amborella trichopoda]
          Length = 238

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 32/76 (42%), Positives = 52/76 (68%)
 Frame = -2

Query: 899 EIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTYCALISAL 720
           E+  KM+   V +DH+P  ILI+KYC  ++ + A++LYEEMF  GL S+  TY  LI+ L
Sbjct: 157 ELLVKMKNMDVPVDHVPHPILIRKYCKEKQLDIAFDLYEEMFEKGLRSKACTYHTLITEL 216

Query: 719 SRKGLMQKAMLVHNDM 672
           ++ G  ++A+ V+++M
Sbjct: 217 TKNGFFKEALQVNHNM 232


>ref|XP_006282494.1| hypothetical protein CARUB_v10006484mg [Capsella rubella]
           gi|482551199|gb|EOA15392.1| hypothetical protein
           CARUB_v10006484mg [Capsella rubella]
          Length = 747

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 54/88 (61%)
 Frame = -2

Query: 917 NVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTYC 738
           +V EA+ +  +M   G+  D + +  LI+ +C  R  ++AY+LY EM R+GL     TY 
Sbjct: 464 DVDEALRVKREMVEKGIKPDTVTYSSLIQGFCEQRRTKEAYDLYNEMLRVGLPPDEFTYT 523

Query: 737 ALISALSRKGLMQKAMLVHNDMDSLGLM 654
           ALI+A   +G ++KA+ +HN+M   G++
Sbjct: 524 ALINAYCMEGDLEKALHLHNEMVEKGVL 551


>ref|NP_198787.1| pentatricopeptide repeat-containing protein EMB2745 [Arabidopsis
           thaliana] gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 33/88 (37%), Positives = 54/88 (61%)
 Frame = -2

Query: 917 NVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTYC 738
           +V EA+ +  +M   G+  D I +  LI+ +C  R  ++A +LYEEM R+GL     TY 
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524

Query: 737 ALISALSRKGLMQKAMLVHNDMDSLGLM 654
           ALI+A   +G ++KA+ +HN+M   G++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVL 552


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 33/88 (37%), Positives = 54/88 (61%)
 Frame = -2

Query: 917 NVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTYC 738
           +V EA+ +  KM   G+  D I +  LI+ +C  R  ++A +L++EM R+GL     TY 
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYT 524

Query: 737 ALISALSRKGLMQKAMLVHNDMDSLGLM 654
           ALI+A   +G +QKA+ +HN+M   G++
Sbjct: 525 ALINAYCMEGDLQKAIQLHNEMVEKGVL 552


>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Solanum lycopersicum]
          Length = 839

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 34/89 (38%), Positives = 52/89 (58%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           GN+QEAV +   M +SGV ID + +  LI  +C     + A+ L EEM + G+A   STY
Sbjct: 518 GNIQEAVRLLKTMLKSGVQIDSMTYNTLICAFCKEGNLDGAFMLREEMVKQGIAPDVSTY 577

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLM 654
             L+  L  KG + +A+L+ ++  S GL+
Sbjct: 578 NVLLHGLGEKGKVDEALLLWDECRSKGLV 606


>ref|XP_006371854.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550318031|gb|ERP49651.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 532

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 24/46 (52%), Positives = 38/46 (82%)
 Frame = -2

Query: 917 NVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEE 780
           N +EA E+  K+ +SG++IDH+PFQILIK+YC ++EP++A+ LY +
Sbjct: 464 NTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRK 509


>ref|XP_007133763.1| hypothetical protein PHAVU_011G207000g [Phaseolus vulgaris]
           gi|593263170|ref|XP_007133764.1| hypothetical protein
           PHAVU_011G207000g [Phaseolus vulgaris]
           gi|561006763|gb|ESW05757.1| hypothetical protein
           PHAVU_011G207000g [Phaseolus vulgaris]
           gi|561006764|gb|ESW05758.1| hypothetical protein
           PHAVU_011G207000g [Phaseolus vulgaris]
          Length = 582

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRP 750
           G ++EA E++ K+ +SG++ DHIP QIL  KYC L EP +A+NLY++       S P
Sbjct: 525 GRMKEAEELYAKILKSGLLNDHIPVQILFNKYCKLEEPVRAFNLYQDWLESKRGSHP 581


>ref|XP_006405601.1| hypothetical protein EUTSA_v10027654mg [Eutrema salsugineum]
           gi|557106739|gb|ESQ47054.1| hypothetical protein
           EUTSA_v10027654mg [Eutrema salsugineum]
          Length = 747

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 31/88 (35%), Positives = 53/88 (60%)
 Frame = -2

Query: 917 NVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTYC 738
           +V EA+ +  +M   G+  D I +  LI+ +C  R  ++A ++++EM R+GL     TY 
Sbjct: 465 DVDEALRVKREMVEKGIEPDTITYSSLIQGFCEQRRTKEACDIFDEMLRLGLPPDEFTYT 524

Query: 737 ALISALSRKGLMQKAMLVHNDMDSLGLM 654
           ALI+A   +G ++KA  +HN+M   GL+
Sbjct: 525 ALINAHCVEGNLEKAFHLHNEMVEKGLL 552


>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Solanum tuberosum]
          Length = 928

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 34/89 (38%), Positives = 50/89 (56%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           GN+QEAV +   M  SGV ID + +  LI  +C     + A+ L EEM + G+A   STY
Sbjct: 607 GNIQEAVRLLKTMLGSGVQIDSMTYNTLICAFCKEGNLDGAFMLREEMVKQGIAPDVSTY 666

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLM 654
             L+  L  KG   +A+L+ ++  S GL+
Sbjct: 667 NVLLHGLGEKGKTDEALLLWDECLSKGLV 695


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/88 (35%), Positives = 51/88 (57%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G VQEA+++F++++  G+V D   +  LI  +C   E EKA+ L++EM   G+A     Y
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGL 657
            AL+  L + G +Q+A  + + M   GL
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGL 625


>emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/88 (35%), Positives = 51/88 (57%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G VQEA+++F++++  G+V D   +  LI  +C   E EKA+ L++EM   G+A     Y
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGL 657
            AL+  L + G +Q+A  + + M   GL
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGL 426


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/88 (35%), Positives = 51/88 (57%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G VQEA+++F++++  G+V D   +  LI  +C   E EKA+ L++EM   G+A     Y
Sbjct: 627 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGL 657
            AL+  L + G +Q+A  + + M   GL
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGL 714


>ref|XP_006352878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 612

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 31/83 (37%), Positives = 48/83 (57%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G +Q+A+EIF  M  +G   D   F  LI  +C + + ++A  +Y +MF+ G+ +   TY
Sbjct: 467 GMIQQALEIFGDMSSNGCKPDIFTFNALILGFCKIDKMDEALGIYRDMFQEGVIANTVTY 526

Query: 740 CALISALSRKGLMQKAMLVHNDM 672
             LI A  RKG  Q+A+ + NDM
Sbjct: 527 NTLIHAFLRKGKTQEALKLVNDM 549


>ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565372595|ref|XP_006352877.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 720

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 31/83 (37%), Positives = 48/83 (57%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G +Q+A+EIF  M  +G   D   F  LI  +C + + ++A  +Y +MF+ G+ +   TY
Sbjct: 467 GMIQQALEIFGDMSSNGCKPDIFTFNALILGFCKIDKMDEALGIYRDMFQEGVIANTVTY 526

Query: 740 CALISALSRKGLMQKAMLVHNDM 672
             LI A  RKG  Q+A+ + NDM
Sbjct: 527 NTLIHAFLRKGKTQEALKLVNDM 549


>ref|XP_006339078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like isoform X2 [Solanum tuberosum]
          Length = 485

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G   E   +F +++  GV  D   +  +I  YC L    KAY +++EM   GL     TY
Sbjct: 101 GEFGEMKRLFMEIEEKGVKPDVHLYTSMISGYCKLGNVRKAYQVFDEMTERGLVPDGHTY 160

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLMI 651
            ALI+ L + GLMQ+A ++ N+M S G+ I
Sbjct: 161 GALINGLCKAGLMQEAEVLVNEMQSKGIWI 190


>ref|XP_006339077.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like isoform X1 [Solanum tuberosum]
          Length = 486

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYEEMFRMGLASRPSTY 741
           G   E   +F +++  GV  D   +  +I  YC L    KAY +++EM   GL     TY
Sbjct: 101 GEFGEMKRLFMEIEEKGVKPDVHLYTSMISGYCKLGNVRKAYQVFDEMTERGLVPDGHTY 160

Query: 740 CALISALSRKGLMQKAMLVHNDMDSLGLMI 651
            ALI+ L + GLMQ+A ++ N+M S G+ I
Sbjct: 161 GALINGLCKAGLMQEAEVLVNEMQSKGIWI 190


>ref|XP_007224975.1| hypothetical protein PRUPE_ppa020759mg, partial [Prunus persica]
           gi|462421911|gb|EMJ26174.1| hypothetical protein
           PRUPE_ppa020759mg, partial [Prunus persica]
          Length = 444

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 21/46 (45%), Positives = 38/46 (82%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNLYE 783
           GN+++A E+F  +Q SG+ IDH+PF++L+K+YC ++EP+ A+ +Y+
Sbjct: 399 GNMKKAEELFENIQASGLPIDHVPFKVLVKQYCKIKEPDMAFGIYQ 444


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -2

Query: 920 GNVQEAVEIFTKMQRSGVVIDHIPFQILIKKYCNLREPEKAYNL 789
           G+V EA E+  K+QRSG+ IDH PFQILI+KYC  R P +AY+L
Sbjct: 533 GHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576