BLASTX nr result
ID: Cocculus23_contig00027540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027540
(280 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006605886.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
emb|CBI25024.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera] 70 2e-10
gb|EYU37201.1| hypothetical protein MIMGU_mgv1a026332mg [Mimulus... 69 5e-10
ref|XP_006485460.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
ref|XP_007212977.1| hypothetical protein PRUPE_ppa022473mg [Prun... 68 1e-09
ref|XP_007156184.1| hypothetical protein PHAVU_003G265400g [Phas... 68 1e-09
ref|XP_006445760.1| hypothetical protein CICLE_v10014627mg [Citr... 68 1e-09
gb|EXB37002.1| hypothetical protein L484_018381 [Morus notabilis] 67 3e-09
ref|XP_007010452.1| Pentatricopeptide repeat (PPR) superfamily p... 66 4e-09
ref|XP_002316490.2| hypothetical protein POPTR_0010s24750g [Popu... 65 1e-08
ref|XP_007213474.1| hypothetical protein PRUPE_ppa023792mg [Prun... 65 1e-08
ref|XP_004497133.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_004305395.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_006833353.1| hypothetical protein AMTR_s00109p00094190 [A... 62 1e-07
emb|CAB86020.1| putative protein [Arabidopsis thaliana] gi|97584... 57 2e-06
ref|NP_196098.3| pentatricopeptide repeat-containing protein [Ar... 57 2e-06
>ref|XP_006605886.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = -2
Query: 267 SCFDFHYRGFSVVSTANFETLYLESSPCFRFCGIRMLEDLLQKCARNKLAGEGKVCHAQV 88
+C+ H R +V+S A E+ +E+ + L LLQ CA+ + + G+ CHAQ+
Sbjct: 12 NCYGIHIRKLTVISEAKPESSKVEN--VVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQI 69
Query: 87 ILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
I GL D L SN++INMYSKC LVD+AR
Sbjct: 70 IRIGLEMDILTSNMLINMYSKCSLVDSAR 98
>ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Frame = -2
Query: 255 FHYRGFSVVSTANFETLYLESSPCFRFCG-----------IRMLEDLLQKCARNKLAGEG 109
F + V +T F +L SS C C + + ++L+ CA+ KL +G
Sbjct: 26 FQFLSLRVCTTQFFASL--SSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQG 83
Query: 108 KVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
K CHAQ++L GL +D L SNI+INMYSKCG VD AR
Sbjct: 84 KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
>ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Frame = -2
Query: 255 FHYRGFSVVSTANFETLYLESSPCFRFCG-----------IRMLEDLLQKCARNKLAGEG 109
F + V +T F +L SS C C + + ++L+ CA+ KL +G
Sbjct: 26 FQFLSLRVCTTQFFASL--SSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQG 83
Query: 108 KVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
K CHAQ++L GL +D L SNI+INMYSKCG VD AR
Sbjct: 84 KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 159 LEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
L+ LLQ ARN+ A EG CHAQ+I GL +DT+ SN+++NMYSKCGLV++AR
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESAR 102
>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 159 LEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
L+ LLQ ARN+ A EG CHAQ+I GL +DT+ SN+++NMYSKCGLV++AR
Sbjct: 23 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESAR 75
>emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 159 LEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
L+ LLQ ARN+ A EG CHAQ+I GL +DT+ SN+++NMYSKCGLV++AR
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESAR 102
>gb|EYU37201.1| hypothetical protein MIMGU_mgv1a026332mg [Mimulus guttatus]
Length = 611
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = -2
Query: 261 FDFHYRGFSVVSTANFETLYLESSPCFRFCGIRMLEDLLQKCARNKLAGEGKVCHAQVIL 82
F + R S TA +E E R+ + ++QKCA+ +GK CH+Q+I
Sbjct: 14 FTLNCRSISSTCTAKYEPPIQEED--------RVWQTIIQKCAKKGAIAQGKSCHSQIIH 65
Query: 81 AGLGSDTLMSNIIINMYSKCGLVDAAR 1
GL +DTL SN++INMYSKCG+V+ AR
Sbjct: 66 FGLQADTLTSNMLINMYSKCGVVEYAR 92
>ref|XP_006485460.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Citrus sinensis]
Length = 608
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = -2
Query: 255 FHYRGFSVVSTANFETLYLESSPCFRFCGIRMLEDLLQKCARNKLAGEGKVCHAQVILAG 76
F+Y+ FS + A+ +S + L+ LQ CAR + GKVCHA++I G
Sbjct: 11 FYYKSFSSSAIAS-------ASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMG 63
Query: 75 LGSDTLMSNIIINMYSKCGLVDAAR 1
L +DTL SNI+IN YSKCGL+ AR
Sbjct: 64 LNNDTLTSNILINFYSKCGLISGAR 88
>ref|XP_007212977.1| hypothetical protein PRUPE_ppa022473mg [Prunus persica]
gi|462408842|gb|EMJ14176.1| hypothetical protein
PRUPE_ppa022473mg [Prunus persica]
Length = 589
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -2
Query: 162 MLEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAA 4
+L +LQ CAR EGK CH Q+I GL +DTL SN++INMYSKC LVD A
Sbjct: 17 LLHQILQSCARTGAPMEGKACHGQIIRVGLQADTLTSNMLINMYSKCSLVDCA 69
>ref|XP_007156184.1| hypothetical protein PHAVU_003G265400g [Phaseolus vulgaris]
gi|561029538|gb|ESW28178.1| hypothetical protein
PHAVU_003G265400g [Phaseolus vulgaris]
Length = 619
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = -2
Query: 264 CFDFHYRGFSVVSTANFETLYLESSPCFRFCGIRMLEDLLQKCARNKLAGEGKVCHAQVI 85
C+ H R SV+S E +E+ + L LLQ CA+ + + G+ CHAQVI
Sbjct: 13 CYRIHIRKLSVISDNKPEPSLVEN--VVHVERVSNLHYLLQLCAKTRSSVGGRACHAQVI 70
Query: 84 LAGLGSDTLMSNIIINMYSKCGLVDAAR 1
G D L SN++INMYSKC LVD+AR
Sbjct: 71 RVGWEMDVLTSNMLINMYSKCSLVDSAR 98
>ref|XP_006445760.1| hypothetical protein CICLE_v10014627mg [Citrus clementina]
gi|557548371|gb|ESR59000.1| hypothetical protein
CICLE_v10014627mg [Citrus clementina]
Length = 616
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -2
Query: 159 LEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
L+ LQ CAR + GKVCHA++I GL +DTL SNI+IN YSKCGL+ AR
Sbjct: 44 LQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGAR 96
>gb|EXB37002.1| hypothetical protein L484_018381 [Morus notabilis]
Length = 623
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = -2
Query: 255 FHYRGFSVVSTANFETLYLESSPCFRFCG-----IRMLEDLLQKCARNKLAGEGKVCHAQ 91
F +R FS + AN E +S + G I +L LQ+ AR EGK CHAQ
Sbjct: 17 FCHRKFSTI--ANLELDGTTTSDYITWVGKSANPIPLLHQTLQRSARTGSTMEGKACHAQ 74
Query: 90 VILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
+I GL +DTL SN++INMYSKC LV AR
Sbjct: 75 IITIGLRADTLTSNMLINMYSKCDLVSCAR 104
>ref|XP_007010452.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508727365|gb|EOY19262.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 629
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = -2
Query: 258 DFHYRGFSVVSTANFETLYLESSPCFRFC--GIRMLEDLLQKCARNKLAGEGKVCHAQVI 85
+F G + + A ET E + C + L+ +LQ CARN+ A GK CHA I
Sbjct: 23 NFSTLGVASAAAAELETPTPEDLSWRKMCCTQVSYLQTVLQLCARNRAAIPGKACHALTI 82
Query: 84 LAGLGSDTLMSNIIINMYSKCGLVDAAR 1
GL +DT+ SNI+INMYSK GL+ AR
Sbjct: 83 HFGLQADTITSNILINMYSKSGLLSCAR 110
>ref|XP_002316490.2| hypothetical protein POPTR_0010s24750g [Populus trichocarpa]
gi|550330541|gb|EEF02661.2| hypothetical protein
POPTR_0010s24750g [Populus trichocarpa]
Length = 522
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -2
Query: 177 FCGIRM-LEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAA 4
FC + + L LLQ CA+N+ GK CH QVI GL +DTL SN+++NMYSKCGL+ A
Sbjct: 24 FCSLVLKLHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRA 82
>ref|XP_007213474.1| hypothetical protein PRUPE_ppa023792mg [Prunus persica]
gi|462409339|gb|EMJ14673.1| hypothetical protein
PRUPE_ppa023792mg [Prunus persica]
Length = 472
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = -2
Query: 162 MLEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAA 4
+L +LQ CAR EGK CH Q+I GL + TL SNI+INMYSKCGLV A
Sbjct: 52 LLHQILQSCARTGAPMEGKACHRQIICLGLQAGTLTSNILINMYSKCGLVYCA 104
>ref|XP_004497133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cicer arietinum]
Length = 628
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -2
Query: 267 SCFDFHYRGFSVVSTANFETLYLES--SPCFRFCGIRMLEDLLQKCARNKLAGEGKVCHA 94
S H+R S+VS E L + + I L+ LLQ CA+ K + G+ CHA
Sbjct: 18 STSSIHFRKLSIVSLPESELLNVVKVVNVGTNSTHISNLQYLLQFCAKTKSSIGGRACHA 77
Query: 93 QVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
Q I GL +D L SN++INMYSKC LV+ AR
Sbjct: 78 QTIHVGLKTDILTSNMLINMYSKCSLVNDAR 108
>ref|XP_004305395.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Fragaria vesca subsp. vesca]
Length = 663
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = -2
Query: 246 RGFSVVSTANFETLYLESSPCFRFCG-----IRMLEDLLQKCARNKLAGEGKVCHAQVIL 82
R FS +S A + C G + +L +LQ A EGK CHAQ I
Sbjct: 60 RAFSAISNAKADRS--RDQECLVSLGTSATQLSLLHQILQSSAGKGAPMEGKACHAQSIR 117
Query: 81 AGLGSDTLMSNIIINMYSKCGLVDAAR 1
GL SDTL SN++INMY+KCGL + AR
Sbjct: 118 VGLQSDTLTSNMLINMYAKCGLHNCAR 144
>ref|XP_006833353.1| hypothetical protein AMTR_s00109p00094190 [Amborella trichopoda]
gi|548838029|gb|ERM98631.1| hypothetical protein
AMTR_s00109p00094190 [Amborella trichopoda]
Length = 618
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = -2
Query: 279 RKVYSCFDFHYRGFSVVSTANFETLYLESSPCF--RFCGIRMLEDLLQKCARNKLAGEGK 106
R++Y+ H+R S +A E S R G+ +L++LLQ+C K +GK
Sbjct: 7 RRLYNGIHTHHRCLSFKLSAQPEITIPRSISLTEEREPGLHLLQNLLQRCVLEKSLSKGK 66
Query: 105 VCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
HA +I L +DT +SNI+INMY KCG +D AR
Sbjct: 67 SYHAHIIQNRLQTDTKLSNILINMYWKCGSLDYAR 101
>emb|CAB86020.1| putative protein [Arabidopsis thaliana] gi|9758453|dbj|BAB08982.1|
selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = -2
Query: 177 FCGIRMLEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
F ++ ++LQ CARN E K CH ++I L D + N++IN YSKCG V+ AR
Sbjct: 50 FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELAR 108
>ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g04780 gi|332003400|gb|AED90783.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = -2
Query: 177 FCGIRMLEDLLQKCARNKLAGEGKVCHAQVILAGLGSDTLMSNIIINMYSKCGLVDAAR 1
F ++ ++LQ CARN E K CH ++I L D + N++IN YSKCG V+ AR
Sbjct: 58 FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELAR 116