BLASTX nr result
ID: Cocculus23_contig00027015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00027015
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC28025.1| Protein ycf2 [Morus notabilis] 65 1e-08
ref|YP_002836134.1| hypothetical chloroplast RF2 [Megaleranthis ... 65 1e-08
ref|YP_001004228.1| hypothetical chloroplast RF2 [Ranunculus mac... 65 1e-08
ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica... 65 1e-08
gb|AEQ36981.1| hypothetical chloroplast RF2 (chloroplast) [Datur... 64 2e-08
ref|YP_009019835.1| Ycf2 (chloroplast) [Vitis rotundifolia] gi|5... 64 3e-08
gb|AHH24317.1| hypothetical chloroplast protein ycf2 (chloroplas... 64 3e-08
gb|AHA13226.1| hypothetical chloroplast RF21 [Thaumatococcus dan... 64 3e-08
gb|AHA12882.1| hypothetical chloroplast RF21 [Maranta leuconeura... 64 3e-08
gb|AHA12799.1| hypothetical chloroplast RF21 [Canna indica] gi|5... 64 3e-08
ref|YP_008854469.1| hypothetical chloroplast RF21 [Musa textilis... 64 3e-08
emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malacc... 64 3e-08
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 64 3e-08
ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides... 64 3e-08
ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense] gi... 64 3e-08
gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense] 64 3e-08
ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [... 64 3e-08
gb|AGE93241.1| hypothetical chloroplast RF21 [Calectasia narraga... 64 3e-08
ref|YP_007475680.1| hypothetical chloroplast RF21 [Heliconia col... 64 3e-08
ref|YP_007475663.1| hypothetical chloroplast RF21 [Heliconia col... 64 3e-08
>gb|EXC28025.1| Protein ycf2 [Morus notabilis]
Length = 143
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQNLIQIQYSTY 150
SIHPI SDPGCDMVPK E DMD SNKISFLN+N+ ++Y+ +
Sbjct: 96 SIHPISSDPGCDMVPKDELDMDSSNKISFLNKNVFHLKYALF 137
>ref|YP_002836134.1| hypothetical chloroplast RF2 [Megaleranthis saniculifolia]
gi|229577815|ref|YP_002836151.1| hypothetical
chloroplast RF2 [Megaleranthis saniculifolia]
gi|226933926|gb|ACO92059.1| hypothetical chloroplast RF2
[Megaleranthis saniculifolia]
gi|226933943|gb|ACO92076.1| hypothetical chloroplast RF2
[Megaleranthis saniculifolia]
Length = 2288
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLNQN
Sbjct: 558 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNQN 590
>ref|YP_001004228.1| hypothetical chloroplast RF2 [Ranunculus macranthus]
gi|122894049|ref|YP_001004245.1| hypothetical
chloroplast RF2 [Ranunculus macranthus]
gi|205413370|sp|A1XGT0.1|YCF2_RANMC RecName:
Full=Protein Ycf2 gi|85540846|gb|ABC70798.1|
hypothetical chloroplast RF2 [Ranunculus macranthus]
gi|85540863|gb|ABC70815.1| hypothetical chloroplast RF2
[Ranunculus macranthus]
Length = 2294
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLNQN
Sbjct: 553 SIHPILSDPGCDMVPKDEPDMDSSNKISFLNQN 585
>ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica]
gi|114330032|ref|YP_740713.1| hypothetical chloroplast
RF2 [Nandina domestica]
gi|122165906|sp|Q09FP8.1|YCF2_NANDO RecName:
Full=Protein Ycf2 gi|114054515|gb|ABI49908.1|
hypothetical chloroplast RF2 [Nandina domestica]
gi|114054534|gb|ABI49927.1| hypothetical chloroplast RF2
[Nandina domestica]
Length = 2299
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLNQN
Sbjct: 561 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNQN 593
>gb|AEQ36981.1| hypothetical chloroplast RF2 (chloroplast) [Datura stramonium]
Length = 2267
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQNLI 171
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N I
Sbjct: 553 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKNPI 587
>ref|YP_009019835.1| Ycf2 (chloroplast) [Vitis rotundifolia]
gi|595789657|ref|YP_009019852.1| Ycf2 (chloroplast)
[Vitis rotundifolia] gi|586947457|gb|AHJ91254.1| Ycf2
(chloroplast) [Vitis rotundifolia]
gi|586947474|gb|AHJ91271.1| Ycf2 (chloroplast) [Vitis
rotundifolia]
Length = 2300
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 555 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 587
>gb|AHH24317.1| hypothetical chloroplast protein ycf2 (chloroplast) [Japonolirion
osense]
Length = 2298
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 555 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 587
>gb|AHA13226.1| hypothetical chloroplast RF21 [Thaumatococcus daniellii]
Length = 2277
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 528 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 560
>gb|AHA12882.1| hypothetical chloroplast RF21 [Maranta leuconeura]
gi|557637302|gb|AHA12900.1| hypothetical chloroplast
RF21 [Maranta leuconeura]
Length = 2197
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 528 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 560
>gb|AHA12799.1| hypothetical chloroplast RF21 [Canna indica]
gi|557637218|gb|AHA12817.1| hypothetical chloroplast
RF21 [Canna indica]
Length = 2316
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 553 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 585
>ref|YP_008854469.1| hypothetical chloroplast RF21 [Musa textilis]
gi|563940614|ref|YP_008854486.1| hypothetical
chloroplast RF21 [Musa textilis]
gi|557636956|gb|AHA12558.1| hypothetical chloroplast
RF21 [Musa textilis] gi|557636974|gb|AHA12576.1|
hypothetical chloroplast RF21 [Musa textilis]
Length = 2307
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 549 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 581
>emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malaccensis]
gi|525312522|emb|CCW72445.1| ycf2 (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 2336
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 569 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 601
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 550 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 582
>ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides]
gi|511348592|ref|YP_008081518.1| Ycf2 (chloroplast)
[Trochodendron aralioides] gi|479279340|gb|AGJ72193.1|
Ycf2 (chloroplast) [Trochodendron aralioides]
gi|479279357|gb|AGJ72210.1| Ycf2 (chloroplast)
[Trochodendron aralioides]
Length = 2298
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 558 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 590
>ref|YP_008081409.1| Ycf2 (chloroplast) [Tetracentron sinense]
gi|511348499|ref|YP_008081427.1| Ycf2 (chloroplast)
[Tetracentron sinense] gi|479279247|gb|AGJ72101.1| Ycf2
(chloroplast) [Tetracentron sinense]
gi|479279264|gb|AGJ72118.1| Ycf2 (chloroplast)
[Tetracentron sinense]
Length = 2292
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 558 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 590
>gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense]
Length = 2076
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 553 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 585
>ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [Ardisia polysticta]
gi|482651262|ref|YP_007890436.1| hypothetical
chloroplast RF2 (chloroplast) [Ardisia polysticta]
gi|456368014|gb|AGG36928.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
gi|456368033|gb|AGG36947.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
Length = 2294
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 553 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 585
>gb|AGE93241.1| hypothetical chloroplast RF21 [Calectasia narragara]
gi|449326680|gb|AGE93260.1| hypothetical chloroplast
RF21 [Calectasia narragara]
Length = 2307
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 560 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 592
>ref|YP_007475680.1| hypothetical chloroplast RF21 [Heliconia collinsiana]
gi|449326160|gb|AGE92746.1| hypothetical chloroplast
RF21 [Heliconia collinsiana]
Length = 2296
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 550 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 582
>ref|YP_007475663.1| hypothetical chloroplast RF21 [Heliconia collinsiana]
gi|449326141|gb|AGE92727.1| hypothetical chloroplast
RF21 [Heliconia collinsiana]
Length = 2288
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -2
Query: 275 SIHPI*SDPGCDMVPKYEPDMDCSNKISFLNQN 177
SIHPI SDPGCDMVPK EPDMD SNKISFLN+N
Sbjct: 550 SIHPISSDPGCDMVPKDEPDMDSSNKISFLNKN 582