BLASTX nr result
ID: Cocculus23_contig00026918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00026918
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006422490.1| hypothetical protein CICLE_v10028628mg [Citr... 82 6e-14
ref|XP_007201260.1| hypothetical protein PRUPE_ppa008415mg [Prun... 81 1e-13
ref|XP_004292276.1| PREDICTED: signal recognition particle 43 kD... 80 4e-13
ref|XP_002313685.2| chaos family protein [Populus trichocarpa] g... 79 8e-13
ref|XP_002305542.2| hypothetical protein POPTR_0004s18750g [Popu... 78 1e-12
ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kD... 77 3e-12
emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera] 77 3e-12
ref|XP_007041704.1| Chloroplast signal recognition particle comp... 76 4e-12
gb|EYU30509.1| hypothetical protein MIMGU_mgv1a009550mg [Mimulus... 74 2e-11
gb|EXB95368.1| Signal recognition particle 43 kDa protein [Morus... 72 8e-11
ref|XP_002512388.1| ankyrin repeat domain protein, putative [Ric... 72 1e-10
ref|XP_006338501.1| PREDICTED: signal recognition particle 43 kD... 70 3e-10
ref|XP_004232254.1| PREDICTED: signal recognition particle 43 kD... 69 5e-10
ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kD... 69 9e-10
ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kD... 69 9e-10
ref|XP_006404533.1| hypothetical protein EUTSA_v10000208mg [Eutr... 68 1e-09
ref|XP_004505675.1| PREDICTED: signal recognition particle 43 kD... 67 3e-09
gb|EEE58279.1| hypothetical protein OsJ_09298 [Oryza sativa Japo... 65 1e-08
ref|NP_001048866.1| Os03g0131900 [Oryza sativa Japonica Group] g... 65 1e-08
sp|Q8LSQ2.1|SR43C_ORYSJ RecName: Full=Probable signal recognitio... 65 1e-08
>ref|XP_006422490.1| hypothetical protein CICLE_v10028628mg [Citrus clementina]
gi|568866640|ref|XP_006486658.1| PREDICTED: signal
recognition particle 43 kDa protein, chloroplastic-like
[Citrus sinensis] gi|557524424|gb|ESR35730.1|
hypothetical protein CICLE_v10028628mg [Citrus
clementina]
Length = 389
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGAL---TSKVEE 172
EGV+GKR GD G+RE+LVKWTDI+EATWEPEENVD +LI+ FE+ ++ GA+ + + +
Sbjct: 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVDPDLIKEFEDSQSDGAVLLNENHIGD 369
Query: 173 AIGS*CFSSNG 205
A+G+ S G
Sbjct: 370 AVGARAQLSEG 380
>ref|XP_007201260.1| hypothetical protein PRUPE_ppa008415mg [Prunus persica]
gi|462396660|gb|EMJ02459.1| hypothetical protein
PRUPE_ppa008415mg [Prunus persica]
Length = 333
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVEEA 175
EGVVGKR GD G EYLVKWTDI+EATWEPEENVD +LI+ FEE +N VEEA
Sbjct: 273 EGVVGKRVGDEGTMEYLVKWTDIDEATWEPEENVDPDLIKEFEEAQNVSG-PGSVEEA 329
>ref|XP_004292276.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 368
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKV 166
EGVVGKR GD + EYLVKWTDI+EATWEPEENVD +LI+ FE+KE+ + ++ V
Sbjct: 310 EGVVGKRVGDDRKMEYLVKWTDIDEATWEPEENVDPDLIKEFEDKESCSSTSTGV 364
>ref|XP_002313685.2| chaos family protein [Populus trichocarpa]
gi|550331703|gb|EEE87640.2| chaos family protein
[Populus trichocarpa]
Length = 380
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAG 148
EGVVGKR GD G+ EYLVKWTDI+EATWEPEENVD +LI+ FEE + G
Sbjct: 319 EGVVGKRLGDDGKNEYLVKWTDIDEATWEPEENVDLDLIKEFEEGQING 367
>ref|XP_002305542.2| hypothetical protein POPTR_0004s18750g [Populus trichocarpa]
gi|550341346|gb|EEE86053.2| hypothetical protein
POPTR_0004s18750g [Populus trichocarpa]
Length = 311
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEE 133
EGV+GKR GD G+ EYLVKWTDI+EATWEPEENVD +LI+ FEE
Sbjct: 251 EGVMGKRPGDDGKNEYLVKWTDIDEATWEPEENVDPDLIKEFEE 294
>ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Vitis vinifera]
Length = 373
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVE 169
+GV+GKR GD G EYLVKWTDI+EATWEPEENVD +LI+ FEE A L + VE
Sbjct: 316 QGVMGKRTGDDGNMEYLVKWTDIDEATWEPEENVDPDLIKAFEE-NGAADLGAHVE 370
>emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]
Length = 373
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVE 169
+GV+GKR GD G EYLVKWTDI+EATWEPEENVD +LI+ FEE A L + VE
Sbjct: 316 QGVMGKRTGDDGNMEYLVKWTDIDEATWEPEENVDPDLIKAFEE-NGAADLGAHVE 370
>ref|XP_007041704.1| Chloroplast signal recognition particle component [Theobroma cacao]
gi|508705639|gb|EOX97535.1| Chloroplast signal
recognition particle component [Theobroma cacao]
Length = 401
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFE--EKENAGALTSK 163
EGVVGKR GD G+ EYLVKW D+EEATWEPEENVD +LI+ FE + E GA+ S+
Sbjct: 322 EGVVGKRMGDDGKNEYLVKWADMEEATWEPEENVDPDLIKEFEAGQIEGNGAVKSQ 377
>gb|EYU30509.1| hypothetical protein MIMGU_mgv1a009550mg [Mimulus guttatus]
Length = 338
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEE 133
EGV+G REG GR+EYLVKW+DIEEATWEP ENVD +LI++F+E
Sbjct: 283 EGVLGVREGGDGRKEYLVKWSDIEEATWEPPENVDPDLIKVFDE 326
>gb|EXB95368.1| Signal recognition particle 43 kDa protein [Morus notabilis]
Length = 380
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEK 136
E VVGKR GD G+ EYLVKW D+E+ATWEPEENVD LI+ FEE+
Sbjct: 318 EAVVGKRVGDDGKNEYLVKWADMEDATWEPEENVDPYLIKEFEEE 362
>ref|XP_002512388.1| ankyrin repeat domain protein, putative [Ricinus communis]
gi|223548349|gb|EEF49840.1| ankyrin repeat domain
protein, putative [Ricinus communis]
Length = 396
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEE 133
EGV+GKR + G+ EYLVKWTDI+EATWEPEENVD +LI+ FE+
Sbjct: 311 EGVMGKRVREDGKNEYLVKWTDIDEATWEPEENVDPDLIKEFED 354
>ref|XP_006338501.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Solanum tuberosum]
Length = 372
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEE 133
E ++ KREG+GG+ EYLVKWTDIEEATWEPEENVD LI FE+
Sbjct: 322 ECILEKREGEGGKDEYLVKWTDIEEATWEPEENVDPLLIEDFEK 365
>ref|XP_004232254.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Solanum lycopersicum]
Length = 390
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEE 133
E ++ KREGD G+ EYLVKWTDIEEATWEPEENVD LI FE+
Sbjct: 318 ECILEKREGDNGKGEYLVKWTDIEEATWEPEENVDPLLIEDFEK 361
>ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 358
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKE 139
E VVGKR GD G+ EYLVKWTDI++ATWEP +NVD +LI FE+ +
Sbjct: 304 EAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 349
>ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449472373|ref|XP_004153574.1| PREDICTED: signal
recognition particle 43 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 355
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKE 139
E VVGKR GD G+ EYLVKWTDI++ATWEP +NVD +LI FE+ +
Sbjct: 304 EAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 349
>ref|XP_006404533.1| hypothetical protein EUTSA_v10000208mg [Eutrema salsugineum]
gi|567190039|ref|XP_006404534.1| hypothetical protein
EUTSA_v10000208mg [Eutrema salsugineum]
gi|557105661|gb|ESQ45986.1| hypothetical protein
EUTSA_v10000208mg [Eutrema salsugineum]
gi|557105662|gb|ESQ45987.1| hypothetical protein
EUTSA_v10000208mg [Eutrema salsugineum]
Length = 364
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEK 136
E V+GKR GD G+ EYLVKWTD+ +ATWEP+ENVD+ L+ L+E++
Sbjct: 308 ERVMGKRMGDDGKTEYLVKWTDMADATWEPQENVDSSLVLLYEQE 352
>ref|XP_004505675.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Cicer arietinum]
Length = 378
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 2 EGVVGKREGDGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKEN 142
E VVG+R GD G+ E LVKW D++E TWEPEENVD EL+++FE N
Sbjct: 307 ETVVGRRVGDDGKFECLVKWVDLDEPTWEPEENVDPELVKVFELSNN 353
>gb|EEE58279.1| hypothetical protein OsJ_09298 [Oryza sativa Japonica Group]
Length = 363
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 2 EGVVGKREG--DGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 151
E VV KRE G+ EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 299 EAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 350
>ref|NP_001048866.1| Os03g0131900 [Oryza sativa Japonica Group]
gi|113547337|dbj|BAF10780.1| Os03g0131900, partial
[Oryza sativa Japonica Group]
Length = 383
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 2 EGVVGKREG--DGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 151
E VV KRE G+ EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 319 EAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 370
>sp|Q8LSQ2.1|SR43C_ORYSJ RecName: Full=Probable signal recognition particle 43 kDa protein,
chloroplastic; Flags: Precursor
gi|108706026|gb|ABF93821.1| 'chromo' domain containing
protein, expressed [Oryza sativa Japonica Group]
Length = 388
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 2 EGVVGKREG--DGGRREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 151
E VV KRE G+ EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 324 EAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 375