BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00026510
         (1035 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Popu...    89   3e-15
ref|XP_002300676.1| hypothetical protein POPTR_0002s01710g [Popu...    65   3e-08
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    60   1e-06
ref|XP_007017940.1| F-box family protein with a domain of Unchar...    59   4e-06

>ref|XP_002300674.2| hypothetical protein POPTR_0002s01590g [Populus trichocarpa]
            gi|550344063|gb|EEE79947.2| hypothetical protein
            POPTR_0002s01590g [Populus trichocarpa]
          Length = 393

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 102/381 (26%), Positives = 159/381 (41%), Gaps = 37/381 (9%)
 Frame = +2

Query: 2    RSVCRSWRSISLQYYSHLVPPQPPWIMLPNLTDPPSTVYGFYGLDGRRFYRYKLLEDCVR 181
            ++VC +W+S   +  +HL PPQ PW++LP      S+   F+ L   +F+   L E   R
Sbjct: 30   QAVCHAWKSSIPKTPNHL-PPQLPWLLLPQSQSNQSSYRAFFNLSTYKFHSLNLPEASHR 88

Query: 182  -GFVGSSGTWLIFMDSERMIRLVNPLSLIQFYLPS--------------------KVIKK 298
                GSS  WLI +D    I ++NPL+  + +LP+                     V  +
Sbjct: 89   KKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDYANVGREYLLVNPQ 148

Query: 299  QPSKTISEEEFPKRFNKVIISSKGPLITMNL*DVIIAAIYDSTKLVLIRLGDEIECFDNQ 478
                T S  +    F K ++ S  PL       V +A +  +  L   + GD  EC++  
Sbjct: 149  GERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGD--ECWN-- 204

Query: 479  XXXXXXXXXXXXXXKKYVP*INLGLFFIYEDVHPRHQPKAIKLIDHFYKIPKLSPKCCFP 658
                           + V   N GLF+        ++   I + D     PK+S      
Sbjct: 205  ------IVENSRSFSEDVIYFN-GLFYAV------NKAGQIVVCDVNGNSPKVSFIETPR 251

Query: 659  GYALDSYYLVEVLGDLMIVLKFSAL-LDARRNIHSTQHFKVFKLDFTSMQWHFVSYLGGH 835
                D  YLV     L++V ++  L ++    I+ T  F+VFKLD    +W  V+ LG  
Sbjct: 252  QIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDM 311

Query: 836  SLMLGDNASV----SCMSSCPYANDCVYAIDVWEKSESLKSYAVGHTKFGVL-------- 979
             L +G+N+S+    S +S C    DC+Y  D  + S +     +G    G+         
Sbjct: 312  MLFIGENSSLALSASGLSGC--MGDCIYYTD--DYSANNYDGHIGEHDLGIFKLSDGSIE 367

Query: 980  -LPCFSGN-YHYLN-PPPIWI 1033
             LPC+  N Y  L  PPP+WI
Sbjct: 368  PLPCYPRNSYSRLQWPPPLWI 388


>ref|XP_002300676.1| hypothetical protein POPTR_0002s01710g [Populus trichocarpa]
           gi|222842402|gb|EEE79949.1| hypothetical protein
           POPTR_0002s01710g [Populus trichocarpa]
          Length = 305

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
 Frame = +2

Query: 2   RSVCRSWRSISLQYYSHLVPPQPPWIMLPNLTDPPSTVYGFYGLDGRRFYRYKLLEDCVR 181
           R+VC+SWRS +L    H +  Q PW++LP   D P+   GFY L   + YR +L E   +
Sbjct: 29  RAVCKSWRS-ALPKKPHDLLCQLPWLLLPYQNDSPNH-RGFYNLADGKTYRLELPEAYEK 86

Query: 182 GFVGSSGTWLIFMDSERMIRLVNPL------------SLIQFYLPSKVIKK-----QPSK 310
              GSS  WL+ ++    I L+NPL            SLI F  P++V+ K      PS 
Sbjct: 87  RCCGSSHGWLVMVEETPAIFLLNPLKKPESIFLHYPPSLINF--PTEVVFKNSRNLHPSS 144

Query: 311 TISEEEFPK-RFNKVIISSKGPLITMNL*DVIIAAIYD 421
             S ++ P+ RF + +  S  P +  N    ++ AIYD
Sbjct: 145 IRSSKQRPRDRFIRKVRVSADPSLVSNF---MVMAIYD 179


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 88/350 (25%), Positives = 138/350 (39%), Gaps = 37/350 (10%)
 Frame = +2

Query: 5    SVCRSWRSISLQYYS--------HLVPPQPPWIML---PNLTDPPSTVYGFYGLDGRRFY 151
            +VC  W S++++ +         HL PP  PW+M+   PN  D  S    FY +  ++  
Sbjct: 159  AVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWLMVLSKPNSKDSRS----FYSITHQKLS 214

Query: 152  RYKLLEDCVRGFVGSSGTWLIFMDSERMIRLVNPLSLIQFYLPSKVIKKQPSKTISEEEF 331
            ++ L       + GSS  WLI  D    + L++P S     LP     K P +T+   E+
Sbjct: 215  KFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPFSRQVIRLPPLTRLKIPQRTVYGFEY 274

Query: 332  PKRFNKVIISSKGPLITMNL*DVIIAAIYDSTK-LVLIRLGDEIECFDNQXXXXXXXXXX 508
                +K ++S+     T N  D ++  IY   K L  I+ GD+     N           
Sbjct: 275  --HLHKGVLSANP---TSNPDDFVLMVIYGHDKGLAFIKSGDQ-----NWAYIDSMVMKD 324

Query: 509  XXXXKKYVP*INLGLFFIYEDVHPRH-----------QPKAIKLIDHFYKIPKLSPKCCF 655
                  Y   ++L LF   + ++              Q  AIK       + K+ P   F
Sbjct: 325  DVLDSPYF--LDLSLFGFEDVIYQERELQFYALSYDSQVLAIK-TSGIGNMVKVVPPYNF 381

Query: 656  PGYALDSYYLVEVL--GDLMIVLKFSALLDARRNIHSTQHFKVFKL--DFTSMQWHFVSY 823
                    YLVE     DL  + K S           +  FKVF +    T  +W  V+ 
Sbjct: 382  GFVPAFKLYLVESPEGRDLWQIEKVSF-------YDKSSGFKVFVMVDRETKPEWVEVNS 434

Query: 824  LGGHSLMLGDNASVS--------CMSSCPY--ANDCVYAIDVWEKSESLK 943
            LG  +L LGDN S++        C  SC Y  + D    +++ ++ ES +
Sbjct: 435  LGDVALFLGDNDSIAVTASRFSGCRPSCIYVASTDDTLEMNMEDERESFR 484


>ref|XP_007017940.1| F-box family protein with a domain of Uncharacterized protein
           function, putative [Theobroma cacao]
           gi|508723268|gb|EOY15165.1| F-box family protein with a
           domain of Uncharacterized protein function, putative
           [Theobroma cacao]
          Length = 395

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   RSVCRSWRSISLQYYSHLVPPQPPWIMLPNLTDPPSTVYGFYGLDGRRFYRYKLLEDCV- 178
           R+VCRSWRS   +   HL PPQ PW+MLP      S    FY L  +R     L E    
Sbjct: 30  RAVCRSWRSSIPKTPFHL-PPQLPWLMLPPSQSHQSH-RAFYDLFTKRLLFLSLPESSNP 87

Query: 179 -RGFVGSSGTWLIFMDSERMIRLVNPLSLIQFYLP 280
            +   GSS  WLI +D    I L+NPLS  + +LP
Sbjct: 88  NKRHCGSSHGWLIILDESPTILLLNPLSRAKLHLP 122