BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00025955
         (866 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   273   8e-71
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ...   266   6e-69
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...   265   1e-68
ref|XP_007025660.1| Transcription factor-related isoform 4 [Theo...   263   8e-68
ref|XP_007025657.1| Transcription factor-related isoform 1 [Theo...   263   8e-68
ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [A...   260   4e-67
ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prun...   256   1e-65
gb|EYU31406.1| hypothetical protein MIMGU_mgv1a006192mg [Mimulus...   255   1e-65
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f...   253   7e-65
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   253   7e-65
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   248   2e-63
ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arab...   246   1e-62
ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutr...   244   4e-62
gb|EXB82782.1| General transcription factor IIH subunit 4 [Morus...   243   5e-62
ref|NP_974564.1| transcription factor-related protein [Arabidops...   243   5e-62
dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]        243   5e-62
ref|NP_193435.2| transcription factor-related protein [Arabidops...   243   5e-62
ref|NP_001190745.1| transcription factor-related protein [Arabid...   243   5e-62
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   243   9e-62
ref|XP_006653885.1| PREDICTED: general transcription factor IIH ...   242   2e-61

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  273 bits (697), Expect = 8e-71
 Identities = 145/225 (64%), Positives = 164/225 (72%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLD LY NTFICEA+LRSLPPLAKKY+LQ+LYI+VPVTA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           K+MEEWVLADGFSKHRVAIDRLIQLRVF ET+DRKKE SY LNP FQ NL+K+L++GGVL
Sbjct: 61  KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSNITVRLP+L++L+AYAL QWE                                
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLISS+Q E+ TNFSSS+MKVFQ
Sbjct: 150 -------------------FLLQLISSTQTEKLTNFSSSLMKVFQ 175


>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
           tuberosum]
          Length = 453

 Score =  266 bits (681), Expect = 6e-69
 Identities = 138/225 (61%), Positives = 161/225 (71%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKI+A+NFMDMVA+LP +KLD LYDN+FICEA+LRSLPPLAKKYVLQ+LYI++P+TA
Sbjct: 1   MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DGFSKH+VAIDRLIQLRV  ET DRKKE +Y LNPKFQ NL+K++VHGG+L
Sbjct: 61  KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEATYQLNPKFQFNLQKHIVHGGIL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSNITVRLP+LEEL+AYA+EQWE                                
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLL LISSS+  ++TN SSSMMK+FQ
Sbjct: 150 -------------------FLLNLISSSEGGKTTNISSSMMKIFQ 175


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
           lycopersicum]
          Length = 453

 Score =  265 bits (678), Expect = 1e-68
 Identities = 139/225 (61%), Positives = 161/225 (71%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKI+A+NFMDMVA+LP +KLD LYDN+FICEA+LRSLPPLAKKYVLQ+LYI++P+TA
Sbjct: 1   MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DGFSKH+VAIDRLIQLRV  ET DRKKE  Y LNPKFQ NL+K++V+GGVL
Sbjct: 61  KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSNITVRLP+LEEL+AYA+EQWE                                
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLL LISSS+A ++TN SSSMMK+FQ
Sbjct: 150 -------------------FLLNLISSSEAGKTTNISSSMMKIFQ 175


>ref|XP_007025660.1| Transcription factor-related isoform 4 [Theobroma cacao]
           gi|508781026|gb|EOY28282.1| Transcription factor-related
           isoform 4 [Theobroma cacao]
          Length = 445

 Score =  263 bits (671), Expect = 8e-68
 Identities = 142/225 (63%), Positives = 159/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLD LY N FICEA+LRS+PPLAKKYVLQ+LYI+VPVTA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KS+EEWVLADG SKH+VAIDRLIQLR+ LE  DRKKE SY LNP FQ NLRK+L++GG+L
Sbjct: 61  KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVIDRKKETSYKLNPTFQTNLRKHLIYGGIL 119

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSN+TVRLPT EELDAYA EQWE                                
Sbjct: 120 PREPMPSNVTVRLPTSEELDAYAHEQWEC------------------------------- 148

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLISS QAE+ TNFSSSMM++FQ
Sbjct: 149 -------------------FLLQLISSGQAEKPTNFSSSMMRIFQ 174


>ref|XP_007025657.1| Transcription factor-related isoform 1 [Theobroma cacao]
           gi|508781023|gb|EOY28279.1| Transcription factor-related
           isoform 1 [Theobroma cacao]
          Length = 451

 Score =  263 bits (671), Expect = 8e-68
 Identities = 142/225 (63%), Positives = 159/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLD LY N FICEA+LRS+PPLAKKYVLQ+LYI+VPVTA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KS+EEWVLADG SKH+VAIDRLIQLR+ LE  DRKKE SY LNP FQ NLRK+L++GG+L
Sbjct: 61  KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVIDRKKETSYKLNPTFQTNLRKHLIYGGIL 119

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSN+TVRLPT EELDAYA EQWE                                
Sbjct: 120 PREPMPSNVTVRLPTSEELDAYAHEQWEC------------------------------- 148

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLISS QAE+ TNFSSSMM++FQ
Sbjct: 149 -------------------FLLQLISSGQAEKPTNFSSSMMRIFQ 174


>ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
           gi|548832404|gb|ERM95200.1| hypothetical protein
           AMTR_s00009p00265760 [Amborella trichopoda]
          Length = 469

 Score =  260 bits (665), Expect = 4e-67
 Identities = 139/225 (61%), Positives = 162/225 (72%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKI+ KNFMDMVAALPA KLD LY NTF CEAVLRSLPP++K YVL++LYI+  V+A
Sbjct: 1   MPQVKIVPKNFMDMVAALPASKLDSLYTNTFFCEAVLRSLPPVSKMYVLRMLYIDAAVSA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           K M+EWVL D FSKH+ AIDRL+QLRVF E+ DRK+EISY LNPK+Q NLRKYLVHGG L
Sbjct: 61  KLMQEWVLPDSFSKHKAAIDRLLQLRVFTESIDRKREISYRLNPKYQENLRKYLVHGGTL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
            REPMPS++TVRLPTLEELDAYAL+QWEV   +   FV ++F  +               
Sbjct: 121 SREPMPSSVTVRLPTLEELDAYALQQWEVA--LSAPFVCLYFAGN--------------- 163

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                          + + FLLQLI+SS  ER TNFS SMMKVFQ
Sbjct: 164 ---------------LEKCFLLQLINSSLVERPTNFSPSMMKVFQ 193


>ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prunus persica]
           gi|462409681|gb|EMJ15015.1| hypothetical protein
           PRUPE_ppa005553mg [Prunus persica]
          Length = 455

 Score =  256 bits (653), Expect = 1e-65
 Identities = 138/225 (61%), Positives = 158/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQV+IIAKNFMDMVAALPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+L IEVPVTA
Sbjct: 1   MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQMLCIEVPVTA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DG SKHRVAIDRLIQLR+F ET DRK+E +Y+LNP FQ NL+K L++G VL
Sbjct: 61  KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLLYGVVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSN+TVRLP+ E+L+A+AL QWE                                
Sbjct: 121 PREPMPSNVTVRLPSSEDLEAFALGQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+SSQ ER +N SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSSQIERPSNISSSMMKIFQ 175


>gb|EYU31406.1| hypothetical protein MIMGU_mgv1a006192mg [Mimulus guttatus]
          Length = 453

 Score =  255 bits (652), Expect = 1e-65
 Identities = 133/225 (59%), Positives = 159/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKI+A+NFMDMVA+LPA KLDKLY+N+FICEA+LRSLPPLAKKYVLQ+LYIE PV+A
Sbjct: 1   MPQVKIVARNFMDMVASLPAFKLDKLYENSFICEAILRSLPPLAKKYVLQMLYIEGPVSA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           K +EEWVL DG SKH+VA+DRLIQLR+  ET +RKKE +Y LNP FQ NL+K++VHGGVL
Sbjct: 61  KWLEEWVLPDGVSKHKVAVDRLIQLRILTETIERKKETTYLLNPTFQSNLQKHIVHGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM SNITVRLPTLE+LDAYA++QWE                                
Sbjct: 121 PREPMASNITVRLPTLEDLDAYAVQQWEY------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLL LI+S++AE+STN SSSMM++FQ
Sbjct: 150 -------------------FLLHLINSTEAEKSTNISSSMMRIFQ 175


>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
           partial [Cucumis sativus]
          Length = 296

 Score =  253 bits (646), Expect = 7e-65
 Identities = 134/225 (59%), Positives = 159/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLD+LY+N FICEA+LRSLPPLAKK+VLQ+LYI+ PV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DG SK++VA+DRLIQLRVF+ET DRK+E +Y LNP FQ NL+K L+HG VL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
            REPMPSNITVRLP+LE+L+AYAL+QWE                                
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S QAE+ +N SSS+MKVFQ
Sbjct: 150 -------------------FLLQLINSGQAEKPSNISSSVMKVFQ 175


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  253 bits (646), Expect = 7e-65
 Identities = 134/225 (59%), Positives = 159/225 (70%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLD+LY+N FICEA+LRSLPPLAKK+VLQ+LYI+ PV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DG SK++VA+DRLIQLRVF+ET DRK+E +Y LNP FQ NL+K L+HG VL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
            REPMPSNITVRLP+LE+L+AYAL+QWE                                
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S QAE+ +N SSS+MKVFQ
Sbjct: 150 -------------------FLLQLINSGQAEKPSNISSSVMKVFQ 175


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  248 bits (633), Expect = 2e-63
 Identities = 134/225 (59%), Positives = 151/225 (67%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQV+IIAKNFMDMVA+LPA+KLDKLY N FIC+A+LRSLPPLAKKYV+QILYI+ PV  
Sbjct: 1   MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           K++EEW+L DG SKHRVAIDRL QLR+F E  DRKKEISY LNP FQ NL+K+L+ GGVL
Sbjct: 61  KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPTFQTNLQKHLIDGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           P EP+ SNI VRLPTLEELD YAL QWE                                
Sbjct: 121 PGEPLASNIAVRLPTLEELDTYALGQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLL LI+S  AERSTNFSSSMMK+FQ
Sbjct: 150 -------------------FLLHLINSGHAERSTNFSSSMMKIFQ 175


>ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arabidopsis lyrata subsp.
           lyrata] gi|297313927|gb|EFH44350.1| hypothetical protein
           ARALYDRAFT_493174 [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  246 bits (627), Expect = 1e-62
 Identities = 131/225 (58%), Positives = 154/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LYI VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYINVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             MEEWVLADG SKHRVAIDRLIQLR+F ET+DRK+ ISYSLNP FQ NL+K+++ GGVL
Sbjct: 61  AMMEEWVLADGASKHRVAIDRLIQLRIFSETSDRKRGISYSLNPTFQNNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM S+  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMHSDNAIKLPSLQELETYALKQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMM++FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMRIFQ 175


>ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutrema salsugineum]
           gi|557115455|gb|ESQ55738.1| hypothetical protein
           EUTSA_v10025179mg [Eutrema salsugineum]
          Length = 452

 Score =  244 bits (622), Expect = 4e-62
 Identities = 129/225 (57%), Positives = 152/225 (67%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+L A+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LY +VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLTAIKLDKLYNNVFICEAILRSLPPLAKKYVLQLLYTDVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             +EEWVLADG SKHR AIDR+IQLR+F+ETTDRKK  SYSLNP FQ NL+K+++ GGVL
Sbjct: 61  TMLEEWVLADGVSKHRAAIDRMIQLRIFMETTDRKKGTSYSLNPTFQKNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM SN  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMNSNNAIKLPSLQELETYALQQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMKIFQ 175


>gb|EXB82782.1| General transcription factor IIH subunit 4 [Morus notabilis]
          Length = 431

 Score =  243 bits (621), Expect = 5e-62
 Identities = 130/225 (57%), Positives = 153/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQV+IIAKNFMDMVA+LPA+KLD LY N FICEA+LRSLPPLAKKYVLQ+L I+ P++A
Sbjct: 1   MPQVRIIAKNFMDMVASLPAMKLDNLYSNAFICEAILRSLPPLAKKYVLQMLCIDGPISA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSM+EWVLADG SKH+VA+DRL+QLR+F ET DRK+E SY LNP FQ NL+K LV G VL
Sbjct: 61  KSMQEWVLADGASKHKVAVDRLLQLRIFTETVDRKRETSYRLNPVFQSNLQKLLVSGEVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           P EP+PS+IT RLP+LEELD +A+EQWE                                
Sbjct: 121 PGEPLPSSITARLPSLEELDVFAIEQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              F+LQLI+SSQAER +N SSS MKVFQ
Sbjct: 150 -------------------FMLQLINSSQAERPSNISSSTMKVFQ 175


>ref|NP_974564.1| transcription factor-related protein [Arabidopsis thaliana]
           gi|332658438|gb|AEE83838.1| transcription factor-related
           protein [Arabidopsis thaliana]
          Length = 462

 Score =  243 bits (621), Expect = 5e-62
 Identities = 130/225 (57%), Positives = 153/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LYI+VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             MEEWVLADG SKHRVAIDRLIQLR+F E +DRK+  SYSLNP FQ NL+K+++ GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM S+  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMKIFQ 175


>dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]
          Length = 452

 Score =  243 bits (621), Expect = 5e-62
 Identities = 130/225 (57%), Positives = 153/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LYI+VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             MEEWVLADG SKHRVAIDRLIQLR+F E +DRK+  SYSLNP FQ NL+K+++ GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM S+  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMKIFQ 175


>ref|NP_193435.2| transcription factor-related protein [Arabidopsis thaliana]
           gi|51969678|dbj|BAD43531.1| unnamed protein product
           [Arabidopsis thaliana] gi|115646777|gb|ABJ17114.1|
           At4g17020 [Arabidopsis thaliana]
           gi|332658439|gb|AEE83839.1| transcription factor-related
           protein [Arabidopsis thaliana]
          Length = 452

 Score =  243 bits (621), Expect = 5e-62
 Identities = 130/225 (57%), Positives = 153/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LYI+VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             MEEWVLADG SKHRVAIDRLIQLR+F E +DRK+  SYSLNP FQ NL+K+++ GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM S+  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMKIFQ 175


>ref|NP_001190745.1| transcription factor-related protein [Arabidopsis thaliana]
           gi|332658440|gb|AEE83840.1| transcription factor-related
           protein [Arabidopsis thaliana]
          Length = 482

 Score =  243 bits (621), Expect = 5e-62
 Identities = 130/225 (57%), Positives = 153/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQVKIIAKNFMDMVA+LPA+KLDKLY+N FICEA+LRSLPPLAKKYVLQ+LYI+VPV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
             MEEWVLADG SKHRVAIDRLIQLR+F E +DRK+  SYSLNP FQ NL+K+++ GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPM S+  ++LP+L+EL+ YAL+QWE                                
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+S Q E+ T  SSSMMK+FQ
Sbjct: 150 -------------------FLLQLINSGQGEKLTGISSSMMKIFQ 175


>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
           subunit 4-like [Fragaria vesca subsp. vesca]
          Length = 453

 Score =  243 bits (619), Expect = 9e-62
 Identities = 131/225 (58%), Positives = 155/225 (68%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MP+V+IIAKNFMDMVAALPA+KLDKLYDN+FICEA+LRSLPPLAKKYVLQ+L +E PV +
Sbjct: 1   MPEVRIIAKNFMDMVAALPAMKLDKLYDNSFICEAILRSLPPLAKKYVLQMLCVEFPVNS 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
           KSMEEWVL DG SKHRVA+DRL+QLR+F ET  +K +++Y+LNP FQ NL K LV+G VL
Sbjct: 61  KSMEEWVLPDGASKHRVAVDRLVQLRIFTETR-KKGDVTYTLNPIFQTNLNKLLVYGVVL 119

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREPMPSN+TVRLP+ EEL+A+ALEQWE                                
Sbjct: 120 PREPMPSNVTVRLPSSEELEAFALEQWEC------------------------------- 148

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+SSQ +R +N SSSMMK FQ
Sbjct: 149 -------------------FLLQLINSSQTDRPSNISSSMMKTFQ 174


>ref|XP_006653885.1| PREDICTED: general transcription factor IIH subunit 4-like [Oryza
           brachyantha]
          Length = 451

 Score =  242 bits (617), Expect = 2e-61
 Identities = 127/225 (56%), Positives = 151/225 (67%)
 Frame = +1

Query: 190 MPQVKIIAKNFMDMVAALPALKLDKLYDNTFICEAVLRSLPPLAKKYVLQILYIEVPVTA 369
           MPQV ++A+NFMDMVAALPA KLD LYD+ FICEAVLRSLPPLAKKY LQ+LY+  PV A
Sbjct: 1   MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAA 60

Query: 370 KSMEEWVLADGFSKHRVAIDRLIQLRVFLETTDRKKEISYSLNPKFQGNLRKYLVHGGVL 549
            +MEEWVL +  +KH+VAIDRL+QLRVF+E  DR+KE+SY +N KFQGN++KYLV GG L
Sbjct: 61  AAMEEWVLDEYAAKHKVAIDRLLQLRVFVEVRDRRKEVSYKMNQKFQGNMQKYLVDGGSL 120

Query: 550 PREPMPSNITVRLPTLEELDAYALEQWEVCTYICG*FVFIFFFKSQRINCPNDTNDF*IF 729
           PREP+PS++T RLPTL EL+AYALEQWE                                
Sbjct: 121 PREPIPSSVTARLPTLAELEAYALEQWEC------------------------------- 149

Query: 730 SMF*FVDQSL*H*LLVSQRFLLQLISSSQAERSTNFSSSMMKVFQ 864
                              FLLQLI+SSQ ER T+FSSSMM+ FQ
Sbjct: 150 -------------------FLLQLINSSQVERGTSFSSSMMRTFQ 175