BLASTX nr result
ID: Cocculus23_contig00025944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00025944
(236 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phas... 81 1e-13
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi... 79 7e-13
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera] 79 7e-13
ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prun... 73 8e-12
gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus... 70 4e-10
ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [A... 69 5e-10
ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containi... 54 9e-09
ref|XP_002516112.1| pentatricopeptide repeat-containing protein,... 62 6e-08
gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis] 59 8e-08
ref|XP_006582478.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein... 55 1e-07
gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, p... 60 3e-07
gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, p... 60 3e-07
gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, p... 59 5e-07
gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, p... 59 5e-07
gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, p... 59 5e-07
gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, p... 59 5e-07
gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, p... 59 5e-07
ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containi... 47 6e-07
>ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phaseolus vulgaris]
gi|561009955|gb|ESW08862.1| hypothetical protein
PHAVU_009G080600g [Phaseolus vulgaris]
Length = 550
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/47 (76%), Positives = 44/47 (93%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+TSLLKGLCI+G+S++A KHL+EMVS G+KPDVKAYGVVVNEYC +G
Sbjct: 340 NTSLLKGLCIVGKSDEAFKHLREMVSRGMKPDVKAYGVVVNEYCKIG 386
Score = 52.8 bits (125), Expect(2) = 5e-08
Identities = 22/31 (70%), Positives = 30/31 (96%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
L+ GLCLSG+++EAK+MM++MRLNGLKD+VA
Sbjct: 308 LVEGLCLSGEVDEAKKMMSRMRLNGLKDNVA 338
Score = 30.0 bits (66), Expect(2) = 5e-08
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 232 TSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
T+L+ G G A + LKEM+ G P+V Y +V C G
Sbjct: 271 TTLIYGYSKRGEFKKAVECLKEMMERGCSPNVVTYNALVEGLCLSG 316
>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Vitis vinifera]
Length = 563
Score = 79.0 bits (193), Expect = 7e-13
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
HTS+LKGLC++G+ +DAA+HLKEMV LG++ D KAYGVVVNEYC +G
Sbjct: 310 HTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIG 356
>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 79.0 bits (193), Expect = 7e-13
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
HTS+LKGLC++G+ +DAA+HLKEMV LG++ D KAYGVVVNEYC +G
Sbjct: 394 HTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIG 440
Score = 52.8 bits (125), Expect(2) = 4e-10
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
+I GLCL+G ++EAKRMMT+MRLNGLKD+VA
Sbjct: 362 IIYGLCLNGNVDEAKRMMTRMRLNGLKDNVA 392
Score = 37.0 bits (84), Expect(2) = 4e-10
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYC 104
+T+L+ G C G +A K+++EMVS +P+V Y ++ C
Sbjct: 324 YTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC 367
>ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 551
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNV 98
+TSLLKG CI+G+S++A KHL+EMVS G+KPDVKAYGVVVNEYC +
Sbjct: 337 NTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYCKI 382
>ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prunus persica]
gi|462421370|gb|EMJ25633.1| hypothetical protein
PRUPE_ppa021491mg [Prunus persica]
Length = 557
Score = 73.2 bits (178), Expect(2) = 8e-12
Identities = 29/46 (63%), Positives = 43/46 (93%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNV 98
HT++LKGLCI+G++++A KHL+++V+LG+KPDV+AYGVV NEYC +
Sbjct: 299 HTAILKGLCIVGKADEAVKHLQDIVNLGMKPDVEAYGVVFNEYCKM 344
Score = 22.3 bits (46), Expect(2) = 8e-12
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
+ N C K + A ++ +MR+ GLK V+
Sbjct: 337 VFNEYCKMRKPDGAMSILREMRMRGLKPSVS 367
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
LI+G CLSG + EAKRM+T+MRLNG+KD++A
Sbjct: 267 LIHGFCLSGHVSEAKRMLTRMRLNGVKDNIA 297
Score = 33.9 bits (76), Expect(2) = 2e-08
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ G C G +A + +KEM G +P++ Y +++ +C G
Sbjct: 229 YTTLIDGYCKKGELKEAMECMKEMGKQGCEPNLFTYNALIHGFCLSG 275
>gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus guttatus]
Length = 614
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
HTSLLKG C+ GRSN+A H KEMVSLG+ D K++ V+VNEYC +G
Sbjct: 396 HTSLLKGYCVAGRSNEAITHFKEMVSLGMNLDKKSFAVIVNEYCKLG 442
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
LING CL+G ++EA+RMMT+MR G+K+++A
Sbjct: 364 LINGFCLNGDVDEARRMMTRMRFAGVKENLA 394
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLG--LKPDVKAYGVVVNEYC 104
+T+L+ G C G +A EMVS G +P+V Y V++N +C
Sbjct: 324 YTTLIDGYCKKGEFKNAIMCFDEMVSKGDNCEPNVFTYNVLINGFC 369
>ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [Amborella trichopoda]
gi|548853182|gb|ERN11188.1| hypothetical protein
AMTR_s00024p00204830 [Amborella trichopoda]
Length = 550
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+TSLLKG CIL + +DAAK L+EMVS GLKPD KAYGV++N YC VG
Sbjct: 330 YTSLLKGFCILEKLDDAAKVLEEMVSKGLKPDSKAYGVLLNAYCKVG 376
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
LINGLC++G I AK+MM++MRLNG+ D+A
Sbjct: 298 LINGLCINGDISGAKKMMSRMRLNGIMADMA 328
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 232 TSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYC 104
T+L+ G C G A K++ EM G +P+V Y ++N C
Sbjct: 261 TTLIDGYCKNGELGPAKKYMDEMEKHGCEPNVLTYNCLINGLC 303
>ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Citrus sinensis]
gi|343887304|dbj|BAK61850.1| PPR containing protein
[Citrus unshiu]
Length = 567
Score = 54.3 bits (129), Expect(2) = 9e-09
Identities = 20/47 (42%), Positives = 34/47 (72%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
H S+LKGLC++G+ + A +L+ ++ + PDVK+Y VV+N +C +G
Sbjct: 335 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 381
Score = 30.8 bits (68), Expect(2) = 9e-09
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDV 6
+ING C GK +EA ++ +MR GLK V
Sbjct: 373 VINGFCKIGKSDEAISLLKEMRARGLKPTV 402
>ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544598|gb|EEF46114.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNV 98
H S+LKGLC G+S++A + KEM+ G+K DVKAY VV+NEYC +
Sbjct: 234 HMSILKGLCYAGKSDEAVNYFKEMIRKGMKCDVKAYAVVINEYCKM 279
>gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]
Length = 563
Score = 49.7 bits (117), Expect(2) = 8e-08
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDV 6
LI+GLCL G + EAKRM+T+MRLNG+KDDV
Sbjct: 299 LIHGLCLIGDLHEAKRMITEMRLNGIKDDV 328
Score = 32.3 bits (72), Expect(2) = 8e-08
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ G G A LKEM G++P+V Y +++ C +G
Sbjct: 261 YTTLIDGYSKKGEVGKAINLLKEMEERGIEPNVFTYNALIHGLCLIG 307
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYC 104
HT++LKGLCI G+ ++A L+EMV LG+ DVKAYGVV+NE C
Sbjct: 331 HTTILKGLCITGKLDEAFAVLREMVFLGMNLDVKAYGVVLNECC 374
>ref|XP_006582478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 187
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNV 98
+TSLLK I+G+ ++ +HL+EMVS +KPDVKAYGVVVNEYC +
Sbjct: 75 NTSLLKVFFIVGKFDETVEHLREMVSHRMKPDVKAYGVVVNEYCKI 120
>ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782741|gb|EOY29997.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 722
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDDVA 3
+I LCL G+++EAKRMM+KMRLNG++D+ A
Sbjct: 304 IIYALCLKGEVDEAKRMMSKMRLNGVEDNTA 334
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ G C G +A K++ +MV G P+V Y ++ C G
Sbjct: 266 YTTLIDGYCKKGEFEEAMKYMDKMVKTGCLPNVLTYNAIIYALCLKG 312
Score = 55.5 bits (132), Expect = 8e-06
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNV 98
H S+LKGLC++GRS +A ++ + MV + D KAYG+VVN YC +
Sbjct: 336 HMSILKGLCVVGRSKEAIEYFRWMVRCNMDLDAKAYGIVVNVYCKL 381
>gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 355 YTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
>gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 338 YTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384
>gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKG 401
>gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 337 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 383
>gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
>gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
>gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -2
Query: 235 HTSLLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
+T+L+ GLC GRS DA K L+EM+S+GLKPD + Y +++NE+C G
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
>ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 739
Score = 46.6 bits (109), Expect(2) = 6e-07
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -2
Query: 226 LLKGLCILGRSNDAAKHLKEMVSLGLKPDVKAYGVVVNEYCNVG 95
L+ GLC G+ NDA K L++M+ GL PD+ Y ++N C +G
Sbjct: 607 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 650
Score = 32.3 bits (72), Expect(2) = 6e-07
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 95 LINGLCLSGKIEEAKRMMTKMRLNGLKDD 9
LINGLC G ++EA + K++ G++ D
Sbjct: 642 LINGLCKMGHVQEASNLFNKLQSEGIRPD 670