BLASTX nr result

ID: Cocculus23_contig00025896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00025896
         (1016 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22873.1| hypothetical protein MIMGU_mgv1a007630mg [Mimulus...    65   3e-08
ref|XP_004517219.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   4e-06
ref|XP_006367130.1| PREDICTED: F-box protein CPR30-like isoform ...    58   5e-06
gb|EXC34932.1| F-box protein [Morus notabilis]                         57   7e-06
ref|XP_003591487.1| F-box/kelch-repeat protein [Medicago truncat...    57   9e-06

>gb|EYU22873.1| hypothetical protein MIMGU_mgv1a007630mg [Mimulus guttatus]
          Length = 401

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 38/126 (30%), Positives = 60/126 (47%)
 Frame = -2

Query: 955 VNNLAKIGTQVYTLGSEHWGTLSDVGYQPPWKVDVAQVSVQGAIHWLTTRYPNPGADQDH 776
           V  + K    VYTLG+  W  +   G        +    + G++HW           +D 
Sbjct: 186 VRRITKSICHVYTLGTRKWRKIEPCGLMGNKDYSIGAF-LNGSLHWFV---------EDF 235

Query: 775 DWEQCVICFDLGREKFNNFRLPSGLKGPSFNKKSRVLSLLGEFLCFSYADFEKQMAIWVM 596
                ++CFDL  E F+ F LPS L       +  VL  LG++LC S + +++++A W+M
Sbjct: 236 KGSYSILCFDLEEETFSTFSLPSLLTDRETGLQ--VLVALGDYLCISDSAYQEEVAFWLM 293

Query: 595 KDYGVE 578
           K+YG E
Sbjct: 294 KEYGDE 299


>ref|XP_004517219.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cicer
           arietinum]
          Length = 391

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
 Frame = -2

Query: 937 IGTQVYTLGSEHWGTLSDVGYQPPWKVDVAQ-----VSVQGAIHWLTTRY-PNPGADQDH 776
           IG Q+++LG   W  +S+    P   ++        V + G I+WL+  Y P    DQ  
Sbjct: 189 IGVQIFSLGDNVWRDISNFPGYPLQLLNHRHKVNGGVYLSGTINWLSASYYPVKSVDQ-- 246

Query: 775 DWEQCVICFDLGREKFNNFRLPSGLKGPSFNKKSRV---LSLLGEFLCFSYADFEKQMAI 605
                ++  DLG E +   +LPSG     F++  RV   + +L + LCFSY   +    I
Sbjct: 247 ---YMIVSLDLGTETYKQMQLPSG-----FDEIPRVDPTIGVLMDCLCFSYDFKQTHFVI 298

Query: 604 WVMKDYGVE 578
           W MK++GVE
Sbjct: 299 WWMKEFGVE 307


>ref|XP_006367130.1| PREDICTED: F-box protein CPR30-like isoform X1 [Solanum tuberosum]
           gi|565403364|ref|XP_006367131.1| PREDICTED: F-box
           protein CPR30-like isoform X2 [Solanum tuberosum]
           gi|565403366|ref|XP_006367132.1| PREDICTED: F-box
           protein CPR30-like isoform X3 [Solanum tuberosum]
           gi|565403368|ref|XP_006367133.1| PREDICTED: F-box
           protein CPR30-like isoform X4 [Solanum tuberosum]
          Length = 402

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
 Frame = -2

Query: 934 GTQVYTLGSEHWGTLSDVGYQPPWKVDVAQVSVQGAIHWLTTRYPNPGADQDH------D 773
           G ++Y+L S+ WG++ D  +Q   ++DV+   V+G +HW       P A  DH      D
Sbjct: 214 GLKIYSLNSDSWGSVDD--HQSQDEIDVSGKFVKGKLHW-------PTATVDHLIINYKD 264

Query: 772 WEQCVICFDLGREKFNNFRLPSGLKGPSFNKKSRVLSLLGEFLCFSYADFEKQMAIWVMK 593
           W   +I FDL  EK+     P   +G      + +L +LG  L          + +WVMK
Sbjct: 265 WN--IISFDLANEKWGEVEHPCYREGDI----ALILGVLGSDLSVFCDYSSSHVDVWVMK 318

Query: 592 DYGVE 578
           +YGV+
Sbjct: 319 EYGVK 323


>gb|EXC34932.1| F-box protein [Morus notabilis]
          Length = 410

 Score = 57.0 bits (136), Expect(2) = 7e-06
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
 Frame = -2

Query: 961 KNVNNLAKIGTQVYTLGSEHWGTLSDVGYQPPWKVDVAQVSVQGAIHWLTTRYPNPGADQ 782
           +N   ++    QV+TLGS  W +L  V +    K   AQV V G +HW+T         +
Sbjct: 196 RNRFRISSSEVQVFTLGSSRWRSLGKVSHD-LHKWPTAQVLVHGRLHWVT-------GPR 247

Query: 781 DHDWEQCVICFDLGREKFNNFRLPS--GLKGPSFNKKSRVLSLLGEFLCFSYADFEKQMA 608
            H   + V+ FDLG EKF     P   GL+   ++     L ++   L  ++     ++ 
Sbjct: 248 RHRTGRNVVSFDLGDEKFREVPRPDVVGLRRCEYH-----LFVMRGCLSAAFGFSNGKLE 302

Query: 607 IWVMKDYGVE 578
           IWVMK+YGV+
Sbjct: 303 IWVMKEYGVK 312



 Score = 20.4 bits (41), Expect(2) = 7e-06
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 1014 FGFHMASNEYK 982
            FGFH  + EYK
Sbjct: 171  FGFHPRTKEYK 181


>ref|XP_003591487.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355480535|gb|AES61738.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 412

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
 Frame = -2

Query: 928 QVYTLGSEHWGTLSDVGYQPPWKVDVAQ-----VSVQGAIHWLTTRYPNPGADQ-DHDW- 770
           +V++LG   W  +      P +  DV Q     V + G ++WL  +  +P     D +W 
Sbjct: 191 RVFSLGDNVWRNIESFPVVPLY-CDVEQFHHTGVFLNGTLNWLAIQDEDPITHYCDLEWN 249

Query: 769 ----EQCVIC-FDLGREKFNNFRLPSGLKGPSFNKKSRVLSLLGEFLCFSYADFEKQMAI 605
               EQ VI   DLG E +N +RLP G       + S    +LG+ LCFSY   +    I
Sbjct: 250 NIKVEQIVIVSLDLGTETYNQYRLPWGFDEVPSAEPS--FGVLGDCLCFSYCYRKTDFII 307

Query: 604 WVMKDYGVE 578
           W MK++GVE
Sbjct: 308 WQMKEFGVE 316


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