BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00025871
         (902 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   347   4e-93
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   330   5e-88
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   324   3e-86
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   323   6e-86
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              323   6e-86
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...   321   3e-85
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         320   5e-85
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   317   3e-84
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   317   3e-84
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   315   2e-83
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             312   1e-82
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...   311   2e-82
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...   311   2e-82
ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul...   311   3e-82
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   305   1e-80
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   302   1e-79
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   302   1e-79
gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus...   289   1e-75
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   281   2e-73
ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [A...   278   3e-72

>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  347 bits (890), Expect = 4e-93
 Identities = 168/267 (62%), Positives = 210/267 (78%), Gaps = 1/267 (0%)
 Frame = +2

Query: 95  ESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVR 274
           E+ +H+CLKL++TE I            FVKGTWFDSHF LSIT+GL+ WVCNA E +V+
Sbjct: 11  ETARHTCLKLEITEPI------------FVKGTWFDSHFHLSITDGLNAWVCNATEGQVK 58

Query: 275 ERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCK 454
           ER  QW+Q + EYI  AE YLGF++PGSIY F DAGD HKRLSWTFEK+G KL+WRWKC+
Sbjct: 59  ERAAQWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQ 118

Query: 455 PSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFES 634
           PSP+++ TTA ILDFLMDANIRLSEEVV+KT SF+RLKEEA+KCL QSE+ A EK EFES
Sbjct: 119 PSPDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFES 178

Query: 635 AVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSP-EQEDNSSEKTESYDEHTDHDDKSDE 811
           ++Y KF+AVLNSKK KLR+LRDQ+S +E + K P E+E+ S++KTES++E +   DKS+E
Sbjct: 179 SIYAKFLAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEE 238

Query: 812 EPTSNLTGTSKSKPPTRQYNRKRKTQK 892
           EP   +TGTS+ KP +R   RKR T+K
Sbjct: 239 EPPEKVTGTSEDKPSSRGRGRKRITRK 265


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  330 bits (846), Expect = 5e-88
 Identities = 161/263 (61%), Positives = 204/263 (77%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           +H+CLKL+++         D  D IFVKGTWF++HFDLSIT+GL+ W+CNA E +V++R 
Sbjct: 4   RHTCLKLEIS---------DATDPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRA 54

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q + EYI+ AE+YLGF++PGS+Y F DA D  KRLSWTFEK+G KL+WRWKC P+P
Sbjct: 55  AQWDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAP 114

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           NS+K TA ILDFLMDANIRLS+EVV KTQSF+RLK EAEKCLAQSE+   EK EFESA+Y
Sbjct: 115 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIY 174

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTS 823
            KF+ VLNSKKSKLRELRD++S Q       ++E+ S++KTES+DE +D DDKS+EEP  
Sbjct: 175 AKFLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSD-DDKSEEEPAK 233

Query: 824 NLTGTSKSKPPTRQYNRKRKTQK 892
            +T TSK  P +R   RKR ++K
Sbjct: 234 AITSTSKGVPASRARGRKRISRK 256


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  324 bits (831), Expect = 3e-86
 Identities = 161/267 (60%), Positives = 203/267 (76%)
 Frame = +2

Query: 92  MESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEV 271
           ME+  H+CLKL++          D  D IFVKGTWF +HFDLSIT+GL+ W+CNA E +V
Sbjct: 1   MEATSHTCLKLEIP---------DATDPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQV 51

Query: 272 RERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKC 451
           ++R   W+Q + EY++ AE+YLGF++PGS+Y F DA D  KRLSWTFEK+G KL+WRWKC
Sbjct: 52  KDRAALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKC 111

Query: 452 KPSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFE 631
             +PNS+K TA ILDFLMDANIRLS+EVV KTQSF+RLK EAEKCLAQSE+   EK EFE
Sbjct: 112 GSAPNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFE 171

Query: 632 SAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDE 811
           SA+Y KF+ VLNSKKSKLRELRD++S Q       +QE+ S++KTES+DE +D DDKS+E
Sbjct: 172 SAIYAKFLGVLNSKKSKLRELRDKLSKQAV-MGDLQQEEQSTDKTESFDEGSD-DDKSEE 229

Query: 812 EPTSNLTGTSKSKPPTRQYNRKRKTQK 892
           EP  ++T TSK  P +R   RKR ++K
Sbjct: 230 EPAKDITSTSKGVPASRARGRKRISRK 256


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  323 bits (828), Expect = 6e-86
 Identities = 159/259 (61%), Positives = 198/259 (76%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           +HSCLKL++  Q          + IF+K TWF SHF LSIT+GL  W+CNA E EVRER 
Sbjct: 6   RHSCLKLQIPNQ---------SEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERA 56

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q + +YI  AE++LGF++PGS+Y F DAGD H+RLSWTFEK+G KL+WRWKC  SP
Sbjct: 57  AQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSP 116

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           +SR TTA +LDFLM+ANIRLSEEVV KTQSF+RLK EAEKCLAQSEK   EK EFESA+Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTS 823
            KF+ VLNSKK+KLRELRDQ+S +ET  K P++ED S++KT S+D+ +D ++  +EE + 
Sbjct: 177 AKFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESD-NEAIEEESSK 235

Query: 824 NLTGTSKSKPPTRQYNRKR 880
           NLTGTSK    +R   RKR
Sbjct: 236 NLTGTSKHVSTSRPRGRKR 254


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  323 bits (828), Expect = 6e-86
 Identities = 159/259 (61%), Positives = 198/259 (76%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           +HSCLKL++  Q          + IF+K TWF SHF LSIT+GL  W+CNA E EVRER 
Sbjct: 6   RHSCLKLQIPNQ---------SEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERA 56

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q + +YI  AE++LGF++PGS+Y F DAGD H+RLSWTFEK+G KL+WRWKC  SP
Sbjct: 57  AQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSP 116

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           +SR TTA +LDFLM+ANIRLSEEVV KTQSF+RLK EAEKCLAQSEK   EK EFESA+Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTS 823
            KF+ VLNSKK+KLRELRDQ+S +ET  K P++ED S++KT S+D+ +D ++  +EE + 
Sbjct: 177 AKFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESD-NEAIEEESSK 235

Query: 824 NLTGTSKSKPPTRQYNRKR 880
           NLTGTSK    +R   RKR
Sbjct: 236 NLTGTSKHVSTSRPRGRKR 254


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  321 bits (822), Expect = 3e-85
 Identities = 163/275 (59%), Positives = 201/275 (73%), Gaps = 3/275 (1%)
 Frame = +2

Query: 77  LEDLTMESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNA 256
           +E  +  + +H+CLKL          E+   + IFVKGTWFD+HFD+SIT+GL  WVCNA
Sbjct: 1   METSSSSTTRHTCLKL----------EIPSTEPIFVKGTWFDAHFDISITDGLHAWVCNA 50

Query: 257 LESEVRERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLD 436
            E EV+ER  QW+Q + EYIE AE+YLGF++ GS+Y F DAGD HKRLSW FEK+G KL+
Sbjct: 51  TEEEVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLE 110

Query: 437 WRWKCKPSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIE 616
           WRWK +PSP+S+K T  ILDFLMDANIRLSEEV RKTQSF++LK EAEKCL QSE+   E
Sbjct: 111 WRWKFRPSPDSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNE 170

Query: 617 KEEFESAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHD 796
           K EFES +Y KF+ VLNSKK+KLRELRDQ+S QET  K+  +E++S++KTESY  HT  D
Sbjct: 171 KMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTESY--HTGSD 228

Query: 797 -DKSDEEPTSNLTGTSKSKPPT--RQYNRKRKTQK 892
            +  +EEP  NLT T K  P    R   RKR T+K
Sbjct: 229 AEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 263


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  320 bits (820), Expect = 5e-85
 Identities = 161/263 (61%), Positives = 199/263 (75%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           +H+CLKL++ E I            F+KGTWF  HF+LSIT+GL++W CNA E EVR R 
Sbjct: 7   RHTCLKLEIPEPI------------FIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRA 54

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q +  YI+ AE++LGF+ PGS+Y F DAG+ +KRLSWTFEK+G KL+WRWKC+PSP
Sbjct: 55  AQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSP 114

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           +++KTT  ILDFLMDANIRLSEEVVRKTQSF+RLK EAEKCLAQSEK   +K EFE+AVY
Sbjct: 115 DTKKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVY 174

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTS 823
            KF+ VLNSKK KLRELRDQ+S +E + +S  QE   S+KTES+D  +D D+KS E+P  
Sbjct: 175 AKFLGVLNSKKRKLRELRDQLSKKEISGES-AQEGEDSDKTESFDRGSD-DEKSVEKPRE 232

Query: 824 NLTGTSKSKPPTRQYNRKRKTQK 892
            L GTSK  PP R Y RK+ T K
Sbjct: 233 KLAGTSKDPPPRRGYVRKKITHK 255


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  317 bits (813), Expect = 3e-84
 Identities = 152/241 (63%), Positives = 192/241 (79%)
 Frame = +2

Query: 170 DVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERIQQWEQSILEYIERAEQYLGFRR 349
           D  +VKGTWF +HFDLSIT+GL+ W+CNA E +V++R  QW+Q + EY++ AE+YLGF++
Sbjct: 4   DETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGFQQ 63

Query: 350 PGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSPNSRKTTAAILDFLMDANIRLSE 529
           PGS+Y+F DA D  KRLSWTFEK+G KL+WRWKC  +PNS+K TA ILDFLMDANIRLS+
Sbjct: 64  PGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSD 123

Query: 530 EVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVYEKFVAVLNSKKSKLRELRDQVS 709
           EVV KTQSF+RLK EAEKCLAQSE+   EK EFESAVY KF+ VLNSKKSKLRELRD++S
Sbjct: 124 EVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLS 183

Query: 710 TQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTSNLTGTSKSKPPTRQYNRKRKTQ 889
            Q       ++E+ S++KTES+DE +D DDKS+EEP  ++T TSK  P +R   RKR ++
Sbjct: 184 KQAVMGDLQQEEEQSTDKTESFDEGSD-DDKSEEEPAKDITSTSKGVPASRARGRKRISR 242

Query: 890 K 892
           K
Sbjct: 243 K 243


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  317 bits (813), Expect = 3e-84
 Identities = 155/263 (58%), Positives = 199/263 (75%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           +H+CLKL++          D  D IF KGTWF +HFDLSIT+GL+ W+CNA E +V++R 
Sbjct: 4   RHTCLKLEIP---------DATDPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRA 54

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q + EYI+ AE+YLGF++PGS+Y F DA D  KRLSWTFEK+G KL+WRWK  P+P
Sbjct: 55  AQWDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAP 114

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           NS+K TA ILDFLMDANIRLS+EVV KTQSF+RLK E +KCLAQSE+   EK EFESA+Y
Sbjct: 115 NSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIY 174

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEEPTS 823
            KF+ VLNSKKSKLRELRD++S Q       ++E+ S++KTES+D  +D DDKS+E+PT 
Sbjct: 175 SKFLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSD-DDKSEEQPTK 233

Query: 824 NLTGTSKSKPPTRQYNRKRKTQK 892
           ++T TS   P +R   RKR ++K
Sbjct: 234 DITSTSIGVPASRARGRKRISRK 256


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  315 bits (806), Expect = 2e-83
 Identities = 160/266 (60%), Positives = 195/266 (73%), Gaps = 3/266 (1%)
 Frame = +2

Query: 104 KHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRERI 283
           + SCLKL          E  +   IFVKGTWF S FDLSIT+GL+ WVC+A E  VR+R 
Sbjct: 10  RQSCLKL----------EPKESQPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRA 59

Query: 284 QQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKPSP 463
            QW+Q + +Y+  AE+YLGF+ P S+Y F DAGD HKRLSWTF+K+G KL+WRWKC+PSP
Sbjct: 60  AQWDQPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSP 119

Query: 464 NSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESAVY 643
           NS++TTAA+LDFLMDAN+ LSEEVVRKTQSF+RLK EAE CL QSE+IA EK EFESAVY
Sbjct: 120 NSKETTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVY 179

Query: 644 EKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESY---DEHTDHDDKSDEE 814
            KF+ VLNSKK+KLRELRD++S QE   K PEQE+ S++KTE+Y   DE+++ D   D  
Sbjct: 180 AKFLGVLNSKKTKLRELRDKLSKQEAAGKLPEQEEESTDKTETYVSDDENSEVDSLKDPP 239

Query: 815 PTSNLTGTSKSKPPTRQYNRKRKTQK 892
           P      TSK  P +R   RKR  QK
Sbjct: 240 P------TSKDIPSSRSQGRKRAFQK 259


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  312 bits (800), Expect = 1e-82
 Identities = 155/266 (58%), Positives = 195/266 (73%)
 Frame = +2

Query: 95  ESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVR 274
           ES +H+CLKL          E  D D IFV  TWF SHF+LS+T+G   W+C+A E EVR
Sbjct: 3   ESKRHTCLKL----------EPKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVR 52

Query: 275 ERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCK 454
           +R  QW+Q + EY+  AE+YLGF++P S+Y+F DAGD HKRLSWTFEK+G KL WRWKC+
Sbjct: 53  DRAAQWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQ 112

Query: 455 PSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFES 634
           P+P+S+KTTA  LDFLMDANIRLSEEVV K+QSF+RLK EAEKCL QSEKI+ EK EFES
Sbjct: 113 PAPDSKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFES 172

Query: 635 AVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEE 814
            +Y KF+ VLNSKK+KLRELR Q+   +       QE+ S++KTES+D+ +D D K +EE
Sbjct: 173 TLYAKFLGVLNSKKAKLRELRAQLEKNDPAAGKLPQEEGSTDKTESFDDGSD-DGKGEEE 231

Query: 815 PTSNLTGTSKSKPPTRQYNRKRKTQK 892
            + N+TGTSK    +R   RKR  +K
Sbjct: 232 SSENVTGTSKGAQTSRSRGRKRTVRK 257


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  311 bits (798), Expect = 2e-82
 Identities = 163/288 (56%), Positives = 201/288 (69%), Gaps = 16/288 (5%)
 Frame = +2

Query: 77  LEDLTMESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNA 256
           +E  +  + +H+CLKL          E+   + IFVKGTWFD+HFD+SIT+GL  WVCNA
Sbjct: 1   METSSSSTTRHTCLKL----------EIPSTEPIFVKGTWFDAHFDISITDGLHAWVCNA 50

Query: 257 LESEVRERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLD 436
            E EV+ER  QW+Q + EYIE AE+YLGF++ GS+Y F DAGD HKRLSW FEK+G KL+
Sbjct: 51  TEEEVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLE 110

Query: 437 WRWKCKPSPNSRKTTAAILDFLMDANIRLS-------------EEVVRKTQSFDRLKEEA 577
           WRWK +PSP+S+K T  ILDFLMDANIRLS             EEV RKTQSF++LK EA
Sbjct: 111 WRWKFRPSPDSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEA 170

Query: 578 EKCLAQSEKIAIEKEEFESAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSS 757
           EKCL QSE+   EK EFES +Y KF+ VLNSKK+KLRELRDQ+S QET  K+  +E++S+
Sbjct: 171 EKCLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDST 230

Query: 758 EKTESYDEHTDHD-DKSDEEPTSNLTGTSKSKPPT--RQYNRKRKTQK 892
           +KTESY  HT  D +  +EEP  NLT T K  P    R   RKR T+K
Sbjct: 231 DKTESY--HTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 276


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  311 bits (797), Expect = 2e-82
 Identities = 163/289 (56%), Positives = 201/289 (69%), Gaps = 17/289 (5%)
 Frame = +2

Query: 77  LEDLTMESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNA 256
           +E  +  + +H+CLKL          E+   + IFVKGTWFD+HFD+SIT+GL  WVCNA
Sbjct: 1   METSSSSTTRHTCLKL----------EIPSTEPIFVKGTWFDAHFDISITDGLHAWVCNA 50

Query: 257 LESEVRERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLD 436
            E EV+ER  QW+Q + EYIE AE+YLGF++ GS+Y F DAGD HKRLSW FEK+G KL+
Sbjct: 51  TEEEVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLE 110

Query: 437 WRWKCKPSPNSRKTTAAILDFLMDANIRLS--------------EEVVRKTQSFDRLKEE 574
           WRWK +PSP+S+K T  ILDFLMDANIRLS              EEV RKTQSF++LK E
Sbjct: 111 WRWKFRPSPDSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVE 170

Query: 575 AEKCLAQSEKIAIEKEEFESAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNS 754
           AEKCL QSE+   EK EFES +Y KF+ VLNSKK+KLRELRDQ+S QET  K+  +E++S
Sbjct: 171 AEKCLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDS 230

Query: 755 SEKTESYDEHTDHD-DKSDEEPTSNLTGTSKSKPPT--RQYNRKRKTQK 892
           ++KTESY  HT  D +  +EEP  NLT T K  P    R   RKR T+K
Sbjct: 231 TDKTESY--HTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRKRATRK 277


>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
           gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
           [Medicago truncatula]
          Length = 256

 Score =  311 bits (796), Expect = 3e-82
 Identities = 157/265 (59%), Positives = 201/265 (75%)
 Frame = +2

Query: 95  ESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVR 274
           E  +H+CLKL+LTE+          + IFVKGTWF++HF+LSIT+G  +W CNA E EV+
Sbjct: 3   EKKRHTCLKLQLTEE----------ESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVK 52

Query: 275 ERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCK 454
           +R  QW+Q + EY+E +E+YLGF++P S+Y+F DAGD HKRLSWTFEK G+ L WRWKC 
Sbjct: 53  QRAAQWDQPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMTLHWRWKCM 112

Query: 455 PSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFES 634
            SP+ +KTTA ILDFLMDANIRLSEEVV KT+ F++ K EAEKCLAQSE+IA E+ EFES
Sbjct: 113 KSPDCKKTTAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFES 172

Query: 635 AVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEE 814
            +Y KF+ VLNSKK+KLRELRDQ+S Q    KSP QE+   EKTES+DE +D D KSDE+
Sbjct: 173 QIYTKFLGVLNSKKAKLRELRDQLSKQGNGDKSP-QEEEDPEKTESFDEESD-DGKSDED 230

Query: 815 PTSNLTGTSKSKPPTRQYNRKRKTQ 889
           P   +T +SK    T++ +R R+T+
Sbjct: 231 PQKCITSSSKDAGATKR-SRPRRTR 254


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  305 bits (782), Expect = 1e-80
 Identities = 155/271 (57%), Positives = 196/271 (72%), Gaps = 9/271 (3%)
 Frame = +2

Query: 98  SIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRE 277
           S KH+CLKL ++ +          + IFVKGTWF SHFDL IT+GL +W C+A E EV E
Sbjct: 5   SPKHTCLKLVISNK----------EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEE 54

Query: 278 RIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKP 457
           R  QW+Q + EYI+ AE+YLGF++PGS Y F DAG  HKRLSWTFEK+G KL+WRWKC+P
Sbjct: 55  RASQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQP 114

Query: 458 SPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESA 637
           S NS+KTTA ILDFLMDANIRLS+EVV KT+SF+R+K EAEKCL QSEK++ EKEEFESA
Sbjct: 115 SSNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESA 174

Query: 638 VYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQED-NSSEKTESYDEHTDHDDKSDEE 814
           +Y KF+ VLNSKK KLRELRD++S Q T  + P +ED  S+++T+++DE +D +   +E 
Sbjct: 175 IYAKFLGVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEEMSGEEV 234

Query: 815 PTSNL--------TGTSKSKPPTRQYNRKRK 883
              ++         GTSK  P  R   R RK
Sbjct: 235 EKEDVGTSSKKDDVGTSKDVPAGRGRGRGRK 265


>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum]
          Length = 255

 Score =  302 bits (773), Expect = 1e-79
 Identities = 150/265 (56%), Positives = 199/265 (75%)
 Frame = +2

Query: 95  ESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVR 274
           E  +H+CLKL          +++ ++ IFVKGTWFD+HF+LSIT+G   W C A E E++
Sbjct: 3   EKKRHTCLKL----------QINGEEAIFVKGTWFDTHFNLSITDGFTAWYCYASEEELK 52

Query: 275 ERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCK 454
           +R  QW+Q + EY++ +E YLGF++ GSIY+F DAGD HKRLSWTFEK G+ L WRWKC 
Sbjct: 53  QRAAQWDQPVSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFEKGGMTLHWRWKCM 112

Query: 455 PSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFES 634
            SP+ +KTTA ILDFLMDANIRLSEEVVRKT  F++ K EAEKCLAQSE+IA E+ +FES
Sbjct: 113 QSPDCKKTTAQILDFLMDANIRLSEEVVRKTDLFEKTKVEAEKCLAQSERIANERVDFES 172

Query: 635 AVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTDHDDKSDEE 814
            +Y KF+ VLNSKK+KLRELRDQ+S Q+   KSP++ED  ++KTES+DE +D +D S+E+
Sbjct: 173 QIYTKFLGVLNSKKAKLRELRDQLSKQDNADKSPQEED--TDKTESFDEESD-NDLSNED 229

Query: 815 PTSNLTGTSKSKPPTRQYNRKRKTQ 889
           P   +T +SK K    + +R R+T+
Sbjct: 230 PQKCITSSSK-KVGANKPSRSRRTK 253


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  302 bits (773), Expect = 1e-79
 Identities = 153/263 (58%), Positives = 194/263 (73%), Gaps = 1/263 (0%)
 Frame = +2

Query: 98  SIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVRE 277
           S KH+CLKL ++ +          + IFVKGTWF S+FDL IT+GL +W C+A E EV E
Sbjct: 5   SPKHTCLKLVISNK----------EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEE 54

Query: 278 RIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCKP 457
           R  QW+Q + EYI+  E+YLGF++PGS+Y F DAG  HKRLSWTFEK+G KL+WRWKC+ 
Sbjct: 55  RASQWDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQS 114

Query: 458 SPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFESA 637
           S NS+KTTA ILDFLMDANIRLS+EVV KT+SF+R+K EAEKCL QSEK++ EKEEFESA
Sbjct: 115 SSNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESA 174

Query: 638 VYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQED-NSSEKTESYDEHTDHDDKSDEE 814
           +Y KF+ VLN+KK KLRELRD++S Q T+ + P +ED  S+++TE++DE     + S EE
Sbjct: 175 IYAKFLGVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDE-----EISGEE 229

Query: 815 PTSNLTGTSKSKPPTRQYNRKRK 883
              +  GTSK  P  R   R RK
Sbjct: 230 VEKDDVGTSKDVPARRGRGRGRK 252


>gb|EYU32990.1| hypothetical protein MIMGU_mgv1a012190mg [Mimulus guttatus]
          Length = 259

 Score =  289 bits (739), Expect = 1e-75
 Identities = 150/270 (55%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
 Frame = +2

Query: 92  MESIKHSCLKLKLTEQIREDKEVDDDDV---IFVKGTWFDSHFDLSITNGLDTWVCNALE 262
           M++ +H+CLKL        D  V    V   +FVKGTW  + FDLSIT+GL  W C+A E
Sbjct: 1   MDTPRHTCLKL--------DIRVAGGGVAEPVFVKGTWHPTRFDLSITDGLHAWNCHATE 52

Query: 263 SEVRERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWR 442
            EV+ER   W+Q++ +Y++ AE+YLGF++ GS+Y F DAG+  KRLSWTFEK+G KL+WR
Sbjct: 53  EEVKERASSWDQTVSDYLDLAERYLGFQQSGSVYGFSDAGNGSKRLSWTFEKEGTKLEWR 112

Query: 443 WKCKPSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKE 622
           WKC+PS + +KTTA +LDFLMDANIRLSEEVV K QSFD LK EAEKCLAQSEK++ EK 
Sbjct: 113 WKCQPSSDCKKTTAQVLDFLMDANIRLSEEVVWKMQSFDTLKLEAEKCLAQSEKLSSEKS 172

Query: 623 EFESAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPE-QEDNSSEKTESYDEHTDHDD 799
           EFES +Y KFV VLN+KK+KLRELRD++S Q T    PE +ED S++KTES+DE TD D 
Sbjct: 173 EFESEIYGKFVNVLNTKKAKLRELRDRLSKQGTTHHLPEDEEDQSTDKTESFDEGTDDD- 231

Query: 800 KSDEEPTSNLTGTSK--SKPPTRQYNRKRK 883
             +++   N+  +SK  ++  ++   RKRK
Sbjct: 232 --EDDRGKNILDSSKDATRSASKPRGRKRK 259


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  281 bits (719), Expect = 2e-73
 Identities = 135/233 (57%), Positives = 179/233 (76%)
 Frame = +2

Query: 92  MESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEV 271
           M++I+H+CLKL    ++  + + ++   IFVKGTW    FDLSIT+G   W C+A E EV
Sbjct: 1   MDAIRHTCLKL----EVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEV 56

Query: 272 RERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKC 451
           R R  QW+Q   +Y+  AE+YLGF++PGSIY F DAG+ +KRLSWTF+K+G+KL+WRWKC
Sbjct: 57  RLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKC 116

Query: 452 KPSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFE 631
           +P+ +++ TTA IL+FLMDANIRLSEEVVRK QS +RLK E+EKCLAQSEKI  EK EFE
Sbjct: 117 QPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFE 176

Query: 632 SAVYEKFVAVLNSKKSKLRELRDQVSTQETNRKSPEQEDNSSEKTESYDEHTD 790
           +A+Y KF+ VLN+KK+KLRE RDQ+S Q       +QE+ SS+KTES+D+ +D
Sbjct: 177 TAIYAKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDKTESFDDESD 229


>ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [Amborella trichopoda]
           gi|548855821|gb|ERN13684.1| hypothetical protein
           AMTR_s00049p00133960 [Amborella trichopoda]
          Length = 235

 Score =  278 bits (710), Expect = 3e-72
 Identities = 135/239 (56%), Positives = 175/239 (73%), Gaps = 2/239 (0%)
 Frame = +2

Query: 95  ESIKHSCLKLKLTEQIREDKEVDDDDVIFVKGTWFDSHFDLSITNGLDTWVCNALESEVR 274
           +SIKHSC++L L  +         D V ++ GTW  S F LSIT+GL TW CNA E EV 
Sbjct: 3   DSIKHSCMRLDLGSK---------DGVFYIMGTWLPSRFSLSITDGLRTWTCNASEEEVE 53

Query: 275 ERIQQWEQSILEYIERAEQYLGFRRPGSIYSFVDAGDRHKRLSWTFEKQGIKLDWRWKCK 454
            R  QW+Q + EY+E AE YLGF++PGS+Y+F  AGD ++RLSW +EKQG KL+WRWKC+
Sbjct: 54  NRANQWDQLVSEYLETAEHYLGFQQPGSVYAFTPAGDENRRLSWAYEKQGTKLEWRWKCE 113

Query: 455 PSPNSRKTTAAILDFLMDANIRLSEEVVRKTQSFDRLKEEAEKCLAQSEKIAIEKEEFES 634
            S + +K TA+ILDFLM+AN RLS+EVVR T+SF+R+K EAEKCLAQSE+  I+K EFES
Sbjct: 114 KSSDDKKVTASILDFLMEANTRLSDEVVRNTRSFERMKVEAEKCLAQSERFNIDKAEFES 173

Query: 635 AVYEKFVAVLNSKKSKLRELRDQVSTQETNR--KSPEQEDNSSEKTESYDEHTDHDDKS 805
           A Y KFVAVLNSKK KLR+LRD++S  E     K  + ED+SSEKT++++  +D  + S
Sbjct: 174 AAYAKFVAVLNSKKMKLRDLRDRLSKTEHPHPGKLAQDEDDSSEKTQAFNGESDKSENS 232