BLASTX nr result
ID: Cocculus23_contig00025839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00025839
(1310 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB70641.1| 50S ribosomal protein L2, partial (chloroplast) [... 55 6e-07
gb|ABU85573.1| ribosomal protein L2 [Scaevola aemula] 55 1e-06
gb|AFB70640.1| 50S ribosomal protein L2, partial (chloroplast) [... 50 1e-06
gb|AAT69085.1| ribosomal protein L2 [Stylisma patens] 54 2e-06
gb|AFU96036.1| Rpl2, partial (chloroplast) [Hypericum fraseri] 53 4e-06
gb|ADD30222.1| ribosomal protein L2 [Dillenia indica] gi|3408070... 53 4e-06
ref|YP_001294312.1| ribosomal protein L2 [Illicium oligandrum] g... 51 4e-06
gb|AEK71544.1| ribosomal protein L2 [Picramnia pentandra] 53 4e-06
gb|ACH47418.1| ribosomal protein L2 [Geranium carolinianum] 53 4e-06
gb|AHE41610.1| ribosomal protein L2, partial (chloroplast) [Myti... 53 4e-06
gb|ACH47419.1| ribosomal protein L2 [Geranium macrorrhizum] 54 5e-06
ref|XP_003581106.1| PREDICTED: 50S ribosomal protein L2, chlorop... 48 5e-06
gb|AAT69101.1| ribosomal protein L2 [Cuscuta europaea] 55 5e-06
ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis... 52 9e-06
gb|AFU96037.1| Rpl2, partial (chloroplast) [Hypericum kalmianum] 52 9e-06
ref|YP_008592681.1| ribosomal protein L2 (chloroplast) [Berberis... 52 9e-06
ref|YP_004221962.1| ribosomal protein L2 [Erodium carvifolium] g... 52 9e-06
ref|YP_001430145.1| ribosomal protein L2 [Cuscuta reflexa] gi|16... 52 9e-06
gb|ABU85502.1| ribosomal protein L2 [Passiflora biflora] 53 1e-05
>gb|AFB70641.1| 50S ribosomal protein L2, partial (chloroplast) [Weingartia
kargliana]
Length = 274
Score = 55.5 bits (132), Expect(2) = 6e-07
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
++GR +Y PN+NANICLI Y GEKRY LH RGARIG+
Sbjct: 72 VYGRIVTIEYDPNRNANICLIHYVDGEKRYILHPRGARIGD 112
Score = 26.2 bits (56), Expect(2) = 6e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 53 GGGHKRLYRKIDF 65
>gb|ABU85573.1| ribosomal protein L2 [Scaevola aemula]
Length = 265
Score = 54.7 bits (130), Expect(2) = 1e-06
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA+ICLI Y GEKRY LH RGARIG+
Sbjct: 62 IYGRIVTIEYDPNRNADICLIHYRDGEKRYILHPRGARIGD 102
Score = 26.2 bits (56), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 43 GGGHKRLYRKIDF 55
>gb|AFB70640.1| 50S ribosomal protein L2, partial (chloroplast) [Pereskia sacharosa]
Length = 272
Score = 49.7 bits (117), Expect(2) = 1e-06
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGA IG+
Sbjct: 72 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGD 112
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+CLYRKI+F
Sbjct: 53 GGGHKCLYRKIDF 65
>gb|AAT69085.1| ribosomal protein L2 [Stylisma patens]
Length = 195
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NANICLI Y GEKRY LH RGA IG+
Sbjct: 27 IYGRIIAIEYDPNRNANICLIHYRNGEKRYILHPRGAIIGD 67
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 8 GGGHKRLYRKIDF 20
>gb|AFU96036.1| Rpl2, partial (chloroplast) [Hypericum fraseri]
Length = 280
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 78 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 118
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 56 GGGHKRLYRKIDF 68
>gb|ADD30222.1| ribosomal protein L2 [Dillenia indica] gi|340807061|gb|AEK71668.1|
ribosomal protein L2 [Dillenia indica]
gi|340807257|gb|AEK71839.1| ribosomal protein L2
[Acrotrema costatum]
Length = 276
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 74 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 114
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 55 GGGHKRLYRKIDF 67
>ref|YP_001294312.1| ribosomal protein L2 [Illicium oligandrum]
gi|160419183|sp|A6MMY6.1|RK2_ILLOL RecName: Full=50S
ribosomal protein L2, chloroplastic
gi|147917436|gb|ABQ52560.1| ribosomal protein L2
[Illicium oligandrum]
Length = 275
Score = 50.8 bits (120), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 74 ISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 114
Score = 28.1 bits (61), Expect(2) = 4e-06
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKINF
Sbjct: 55 GGGHKRLYRKINF 67
>gb|AEK71544.1| ribosomal protein L2 [Picramnia pentandra]
Length = 274
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 72 IYGRIITIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 112
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 53 GGGHKRLYRKIDF 65
>gb|ACH47418.1| ribosomal protein L2 [Geranium carolinianum]
Length = 274
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 72 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 112
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 53 GGGHKRLYRKIDF 65
>gb|AHE41610.1| ribosomal protein L2, partial (chloroplast) [Mytilaria laosensis]
Length = 213
Score = 52.8 bits (125), Expect(2) = 4e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGARIG+
Sbjct: 45 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGD 85
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 26 GGGHKRLYRKIDF 38
>gb|ACH47419.1| ribosomal protein L2 [Geranium macrorrhizum]
Length = 274
Score = 53.9 bits (128), Expect(2) = 5e-06
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA+ICLI Y GEKRY LH RGARIG+
Sbjct: 72 IYGRIVTIEYDPNRNASICLIHYGDGEKRYILHPRGARIGD 112
Score = 24.6 bits (52), Expect(2) = 5e-06
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYR+I+F
Sbjct: 53 GGGHKRLYRQIDF 65
>ref|XP_003581106.1| PREDICTED: 50S ribosomal protein L2, chloroplastic-like [Brachypodium
distachyon]
Length = 228
Score = 47.8 bits (112), Expect(2) = 5e-06
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I GR +Y PN+NA ICLI Y GEKRY LH RGA IG+
Sbjct: 89 ISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGD 129
Score = 30.8 bits (68), Expect(2) = 5e-06
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+CLYRKI+F
Sbjct: 70 GGGHKCLYRKIDF 82
>gb|AAT69101.1| ribosomal protein L2 [Cuscuta europaea]
Length = 188
Score = 54.7 bits (130), Expect(2) = 5e-06
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
++GR +Y PN+NANICLI Y+ GEK+Y LH RGA+IG+
Sbjct: 20 LYGRIITIEYDPNRNANICLIHYKTGEKKYILHPRGAQIGD 60
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGG++ LYRKI+F
Sbjct: 1 GGGYKRLYRKIDF 13
>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
gi|536462748|gb|AGU37113.1| ribosomal protein L2
(chloroplast) [Berberis bealei]
Length = 310
Score = 51.6 bits (122), Expect(2) = 9e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I GR +Y PN+NANICLI Y GEKRY LH RGA IG+
Sbjct: 75 ISGRIVTIEYDPNRNANICLIHYRDGEKRYILHPRGAIIGD 115
Score = 26.2 bits (56), Expect(2) = 9e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 56 GGGHKRLYRKIDF 68
>gb|AFU96037.1| Rpl2, partial (chloroplast) [Hypericum kalmianum]
Length = 280
Score = 51.6 bits (122), Expect(2) = 9e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGA+IG+
Sbjct: 78 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAKIGD 118
Score = 26.2 bits (56), Expect(2) = 9e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 56 GGGHKRLYRKIDF 68
>ref|YP_008592681.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
gi|536462722|gb|AGU37087.1| ribosomal protein L2
(chloroplast) [Berberis bealei]
Length = 278
Score = 51.6 bits (122), Expect(2) = 9e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I GR +Y PN+NANICLI Y GEKRY LH RGA IG+
Sbjct: 75 ISGRIVTIEYDPNRNANICLIHYRDGEKRYILHPRGAIIGD 115
Score = 26.2 bits (56), Expect(2) = 9e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 56 GGGHKRLYRKIDF 68
>ref|YP_004221962.1| ribosomal protein L2 [Erodium carvifolium]
gi|316926334|gb|ADU58187.1| ribosomal protein L2 [Erodium
carvifolium]
Length = 275
Score = 51.6 bits (122), Expect(2) = 9e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA ICLI Y GEKRY LH RGA+IG+
Sbjct: 73 IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAKIGD 113
Score = 26.2 bits (56), Expect(2) = 9e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 54 GGGHKRLYRKIDF 66
>ref|YP_001430145.1| ribosomal protein L2 [Cuscuta reflexa]
gi|160419179|sp|A7M9A4.1|RK2_CUSRE RecName: Full=50S
ribosomal protein L2, plastid
gi|156556049|emb|CAM98432.1| ribosomal protein L2
[Cuscuta reflexa]
Length = 275
Score = 51.6 bits (122), Expect(2) = 9e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA+ICLI Y GEKRY LH RGA IG+
Sbjct: 72 IYGRIVTIEYDPNRNAHICLIHYRNGEKRYILHPRGAIIGD 112
Score = 26.2 bits (56), Expect(2) = 9e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYRKI+F
Sbjct: 53 GGGHKRLYRKIDF 65
>gb|ABU85502.1| ribosomal protein L2 [Passiflora biflora]
Length = 132
Score = 53.1 bits (126), Expect(2) = 1e-05
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -3
Query: 1212 IFGRES*SDYGPNQNANICLICYEVGEKRYNLHTRGARIGE 1090
I+GR +Y PN+NA+ICLI Y GEKRY LH RG RIG+
Sbjct: 73 IYGRILTIEYDPNRNASICLIHYRDGEKRYILHPRGTRIGD 113
Score = 24.6 bits (52), Expect(2) = 1e-05
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 1292 GGGHECLYRKINF 1254
GGGH+ LYR+I+F
Sbjct: 54 GGGHKRLYRQIDF 66