BLASTX nr result

ID: Cocculus23_contig00025782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00025782
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESU06764.1| hypothetical protein FGSG_01443 [Fusarium gramine...    68   1e-09
gb|EME85787.1| hypothetical protein MYCFIDRAFT_118885, partial [...    67   2e-09
gb|ERG80040.1| rnase h family member (rnh- ) [Ascaris suum]            60   3e-07
gb|EKG19649.1| hypothetical protein MPH_03081 [Macrophomina phas...    57   3e-06
ref|WP_007833922.1| ribonuclease H [Bacteroides] gi|212665192|gb...    55   8e-06
ref|YP_001298393.1| ribonuclease H1 [Bacteroides vulgatus ATCC 8...    55   8e-06

>gb|ESU06764.1| hypothetical protein FGSG_01443 [Fusarium graminearum PH-1]
          Length = 352

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 28/110 (25%)
 Frame = -1

Query: 279 YAVYRGRKPGLYDKWARAEPQVKGFPGNCY-------------------ERVDS------ 175
           Y V  GRKPG+YD WA  E QVKGFPG  Y                    R+ S      
Sbjct: 26  YGVRTGRKPGIYDTWAECEEQVKGFPGAVYWMRSMMHPSTSVPTASIPTARIPSVSAAQA 85

Query: 174 ---RGKAERKWYVVYEGVNPGVYDSWRDTHEQVSGYPGAWYERAESDTDA 34
              +  A  K+Y V  G  PG+YD+W +    + G PGA +++  +  DA
Sbjct: 86  SVPKVSASGKYYAVAVGSKPGIYDTWSEVERSIKGVPGARHKKFNTWEDA 135


>gb|EME85787.1| hypothetical protein MYCFIDRAFT_118885, partial [Pseudocercospora
           fijiensis CIRAD86]
          Length = 351

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
 Frame = -1

Query: 279 YAVYRGRKPGLYDKWARAEPQVKGFPGNCYERVDSRGKAER---------------KWYV 145
           YAV  G++PG+Y  WA    QV+GFP   ++   S  +AE                KWY 
Sbjct: 16  YAVRVGKEPGIYHSWAECLDQVRGFPKAMFKSFISLSEAEAFVNNEGTSMGEQKVTKWYG 75

Query: 144 VYEGVNPGVYDSWRDTHEQVSGYPGAWYERAESDTDA 34
           V  G NPGVY +W+D  EQ++G+ G  ++  ++ T+A
Sbjct: 76  VQAGRNPGVYTNWQDVLEQITGWKGPKHKGFKTRTEA 112


>gb|ERG80040.1| rnase h family member (rnh- ) [Ascaris suum]
          Length = 228

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
 Frame = -1

Query: 279 YAVYRGRKPGLYDKWARAEPQVKGFPGNCYERVDSRGKAE-------------------R 157
           YAV  GRKPG+Y++WA A+ Q+K +P   Y++  +RG+AE                   +
Sbjct: 6   YAVAHGRKPGVYEEWAEAQKQIKDYPQPVYKKFATRGEAEEFVKARQHERVSMQVDESAK 65

Query: 156 KWYVVYEGVNPGVYDSWRDTHEQVSGYPGAWYERAESDTDAVNKWNAY 13
           K+Y V  G   G++  + +  + ++ YP   Y++ +   +A   +  Y
Sbjct: 66  KFYAVARGKVIGIFTEFDEVKKHIANYPQPMYKKFDDLAEAREYFKKY 113


>gb|EKG19649.1| hypothetical protein MPH_03081 [Macrophomina phaseolina MS6]
          Length = 369

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
 Frame = -1

Query: 279 YAVYRGRKPGLYDKWARAEPQVKGFPGNCYERVDSRGKAE------------RKWYVVYE 136
           YAV  GRKPG+Y  W     QVKGF G  Y+   S  +AE             K+Y V  
Sbjct: 43  YAVQAGRKPGVYSNWNDCLAQVKGFKGAVYKSFPSTAEAEAFISGTASNENPEKFYAVQS 102

Query: 135 GVNPGVYDSWRDTHEQVSGY 76
           G  PGVY  W    +Q  G+
Sbjct: 103 GRVPGVYTDWPSAQKQTIGW 122


>ref|WP_007833922.1| ribonuclease H [Bacteroides] gi|212665192|gb|EEB25764.1|
           hypothetical protein BACDOR_01811 [Bacteroides dorei DSM
           17855] gi|229435930|gb|EEO46007.1| ribonuclease H
           [Bacteroides dorei 5_1_36/D4]
           gi|229454112|gb|EEO59833.1| ribonuclease H [Bacteroides
           sp. 9_1_42FAA] gi|263236009|gb|EEZ21504.1| ribonuclease
           H [Bacteroides sp. 3_1_33FAA]
           gi|392630367|gb|EIY24360.1| hypothetical protein
           HMPREF1063_02941 [Bacteroides dorei CL02T00C15]
           gi|392642002|gb|EIY35774.1| hypothetical protein
           HMPREF1064_01709 [Bacteroides dorei CL02T12C06]
           gi|392643621|gb|EIY37370.1| hypothetical protein
           HMPREF1065_02396 [Bacteroides dorei CL03T12C01]
           gi|524388158|emb|CDB36737.1| uncharacterized protein
           BN543_01451 [Bacteroides dorei CAG:222]
          Length = 208

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = -1

Query: 162 ERKWYVVYEGVNPGVYDSWRDTHEQVSGYPGAWYERAESDTDA 34
           ++K+YVV++GVNPGVYDSW D   Q+ GY GA Y+  E+  +A
Sbjct: 4   KQKYYVVWKGVNPGVYDSWTDCQLQIKGYDGAQYKSFETKEEA 46


>ref|YP_001298393.1| ribonuclease H1 [Bacteroides vulgatus ATCC 8482]
           gi|492439522|ref|WP_005844205.1| ribonuclease H
           [Bacteroides] gi|149932073|gb|ABR38771.1| putative
           ribonuclease H1 [Bacteroides vulgatus ATCC 8482]
           gi|254833915|gb|EET14224.1| ribonuclease H [Bacteroides
           sp. 4_3_47FAA] gi|294448607|gb|EFG17156.1| ribonuclease
           H family protein [Bacteroides vulgatus PC510]
           gi|317388407|gb|EFV69259.1| ribonuclease H1 [Bacteroides
           sp. 3_1_40A] gi|392686419|gb|EIY79725.1| hypothetical
           protein HMPREF1058_01753 [Bacteroides vulgatus
           CL09T03C04] gi|507739225|gb|EOR98344.1| ribonuclease HI
           [Bacteroides vulgatus dnLKV7]
           gi|524826661|emb|CDF16928.1| putative ribonuclease H1
           [Bacteroides vulgatus CAG:6]
          Length = 208

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = -1

Query: 162 ERKWYVVYEGVNPGVYDSWRDTHEQVSGYPGAWYERAESDTDA 34
           ++K+YVV++GVNPGVYDSW D   Q+ GY GA Y+  E+  +A
Sbjct: 4   KQKYYVVWKGVNPGVYDSWTDCQLQIKGYDGAQYKSFETKEEA 46


Top