BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00025112
         (409 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]     143   2e-32
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   140   1e-31
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr...   139   4e-31
ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|50878...   138   7e-31
ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation spec...   137   2e-30
ref|XP_007138689.1| hypothetical protein PHAVU_009G229700g [Phas...   135   6e-30
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   135   6e-30
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu...   134   1e-29
gb|AFK34627.1| unknown [Medicago truncatula]                          132   4e-29
ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation spec...   131   9e-29
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   131   9e-29
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab...   129   6e-28
ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutr...   127   2e-27
ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Caps...   126   3e-27
emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabi...   126   3e-27
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|...   126   3e-27
ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation spec...   126   4e-27
gb|EYU28364.1| hypothetical protein MIMGU_mgv1a013494mg [Mimulus...   123   2e-26
ref|XP_003574450.1| PREDICTED: cleavage and polyadenylation spec...   120   2e-25

>gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]
          Length = 221

 Score =  143 bits (361), Expect = 2e-32
 Identities = 64/81 (79%), Positives = 76/81 (93%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YPYLSP+V++PKECTKL+LVKLP S+KF VPK+LK+LAVPL Q+HENHKTY
Sbjct: 141 WRPDFETLLYPYLSPNVKRPKECTKLYLVKLPESRKFIVPKDLKLLAVPLCQVHENHKTY 200

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           G +I+GVPQLLSKFSFN+IEN
Sbjct: 201 GSIISGVPQLLSKFSFNIIEN 221


>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  140 bits (354), Expect = 1e-31
 Identities = 63/81 (77%), Positives = 74/81 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YPYL P+V+ PKECTKLFLVKLP S+KF VPKNLK+LA+PL Q+HEN KTY
Sbjct: 204 WRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTY 263

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           GP+IAGVPQLLSKFSFN+I++
Sbjct: 264 GPIIAGVPQLLSKFSFNIIDS 284


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  140 bits (354), Expect = 1e-31
 Identities = 63/81 (77%), Positives = 74/81 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YPYL P+V+ PKECTKLFLVKLP S+KF VPKNLK+LA+PL Q+HEN KTY
Sbjct: 211 WRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTY 270

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           GP+IAGVPQLLSKFSFN+I++
Sbjct: 271 GPIIAGVPQLLSKFSFNIIDS 291


>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
           gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
           hypothetical protein CICLE_v10009459mg [Citrus
           clementina]
          Length = 214

 Score =  139 bits (350), Expect = 4e-31
 Identities = 62/79 (78%), Positives = 73/79 (92%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           W+PDFET ++PY  P+V++PKECTKLFLVKLP+SQKF VPKNLK+LAVPL QIHENHKTY
Sbjct: 134 WKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHENHKTY 193

Query: 229 GPVIAGVPQLLSKFSFNVI 173
           G +I+GVPQLLSKFSFN+I
Sbjct: 194 GQIISGVPQLLSKFSFNII 212


>ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|508783097|gb|EOY30353.1|
           CFIM-25 isoform 1 [Theobroma cacao]
          Length = 219

 Score =  138 bits (348), Expect = 7e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WR DFET +YPYL P+V+KPKECTKLFLV+LP S+KF VPKNLK+LAVPL Q+HENHKTY
Sbjct: 139 WRHDFETLLYPYLPPNVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQVHENHKTY 198

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+I+GVPQLLSKFS N+I+
Sbjct: 199 GPIISGVPQLLSKFSINIID 218


>ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like isoform X3 [Cicer arietinum]
          Length = 202

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/80 (75%), Positives = 74/80 (92%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET MYP+L P+V+ PKECTKLFLVKLP S++F+VP+N+K+L+VPL QIHENHKTY
Sbjct: 122 WRPDFETLMYPFLPPNVKHPKECTKLFLVKLPESRRFTVPRNMKLLSVPLCQIHENHKTY 181

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+I+ +PQLLSKFSFN+IE
Sbjct: 182 GPIISRIPQLLSKFSFNMIE 201


>ref|XP_007138689.1| hypothetical protein PHAVU_009G229700g [Phaseolus vulgaris]
           gi|561011776|gb|ESW10683.1| hypothetical protein
           PHAVU_009G229700g [Phaseolus vulgaris]
          Length = 217

 Score =  135 bits (340), Expect = 6e-30
 Identities = 58/81 (71%), Positives = 74/81 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YP+L P++++PKECTK+FLVKLP SQKF VPKN+++LAVPL Q+HENHKTY
Sbjct: 137 WRPDFETLLYPFLPPNIKQPKECTKVFLVKLPASQKFIVPKNMRLLAVPLCQVHENHKTY 196

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           G +I+GVPQLLSKF FN++E+
Sbjct: 197 GEIISGVPQLLSKFCFNMMES 217


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  135 bits (340), Expect = 6e-30
 Identities = 61/79 (77%), Positives = 72/79 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET ++PYLS +V+  KECTKLFLVKLP S+KF VPKNLK++AVPL QIHENHKTY
Sbjct: 137 WRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTY 196

Query: 229 GPVIAGVPQLLSKFSFNVI 173
           GP+I+G+PQLLSKFSFN+I
Sbjct: 197 GPIISGIPQLLSKFSFNII 215


>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
           gi|550336365|gb|EEE91798.2| hypothetical protein
           POPTR_0006s14840g [Populus trichocarpa]
          Length = 258

 Score =  134 bits (338), Expect = 1e-29
 Identities = 60/78 (76%), Positives = 71/78 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WR DFET +YPYL P+++ PKECTKL++VKLP S+KF VPKNLK+LAVPL Q+HENHKTY
Sbjct: 179 WRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHKTY 238

Query: 229 GPVIAGVPQLLSKFSFNV 176
           GPVI+GVPQLLSKFSFN+
Sbjct: 239 GPVISGVPQLLSKFSFNI 256


>gb|AFK34627.1| unknown [Medicago truncatula]
          Length = 205

 Score =  132 bits (333), Expect = 4e-29
 Identities = 58/79 (73%), Positives = 72/79 (91%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET MYP+L P+V+ PKECTKLFLV+LP S++F+VPKN+K+L+VPL QI +NHKTY
Sbjct: 125 WRPDFETSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKTY 184

Query: 229 GPVIAGVPQLLSKFSFNVI 173
           GP+I+ VPQLLSKFSFN+I
Sbjct: 185 GPIISAVPQLLSKFSFNMI 203


>ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum tuberosum]
          Length = 202

 Score =  131 bits (330), Expect = 9e-29
 Identities = 58/77 (75%), Positives = 70/77 (90%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YP+L P++++PKECTKLFLV+LP S KF VPKNLK++AVPL Q+HEN KTY
Sbjct: 121 WRPDFETLIYPFLPPNIKRPKECTKLFLVRLPESCKFIVPKNLKLIAVPLCQVHENFKTY 180

Query: 229 GPVIAGVPQLLSKFSFN 179
           GP+IAGVPQLLSKFS+N
Sbjct: 181 GPIIAGVPQLLSKFSYN 197


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  131 bits (330), Expect = 9e-29
 Identities = 59/81 (72%), Positives = 71/81 (87%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +YPYL P+++ PKECTKLFLV+LP S KF VPKNLK+LAVPL QIH+NHKTY
Sbjct: 134 WRPDFETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTY 193

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           G +I+GVPQLLSK+SF +I +
Sbjct: 194 GGIISGVPQLLSKYSFRIINS 214


>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
           lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
           ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  129 bits (323), Expect = 6e-28
 Identities = 56/80 (70%), Positives = 72/80 (90%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRP+FET MYP+L P+V+ PKECTKLFLV+LP++Q+F VPKN K+LAVPL Q+HEN KTY
Sbjct: 143 WRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEKTY 202

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+I+ +P+LLSKFSFN++E
Sbjct: 203 GPIISQIPKLLSKFSFNMME 222


>ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutrema salsugineum]
           gi|557113973|gb|ESQ54256.1| hypothetical protein
           EUTSA_v10026187mg [Eutrema salsugineum]
          Length = 222

 Score =  127 bits (318), Expect = 2e-27
 Identities = 55/80 (68%), Positives = 72/80 (90%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRP+FE+ MYP+L P+V+ PKECTKLFLV+LP++Q+F VPKN K+LAVPL QIHEN KTY
Sbjct: 142 WRPNFESLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQIHENEKTY 201

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+I+ +P+LLS+FSFN++E
Sbjct: 202 GPIISQIPKLLSRFSFNMME 221


>ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Capsella rubella]
           gi|482563668|gb|EOA27858.1| hypothetical protein
           CARUB_v10024016mg [Capsella rubella]
          Length = 222

 Score =  126 bits (317), Expect = 3e-27
 Identities = 55/80 (68%), Positives = 71/80 (88%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRP+FET MYP+L P+V+ PKEC+KLFLV+LP+ Q+F VPKN K+LAVPL Q+HEN KTY
Sbjct: 142 WRPNFETLMYPFLPPNVKHPKECSKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTY 201

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+I+ +P+LLSKFSFN++E
Sbjct: 202 GPIISQIPKLLSKFSFNMME 221


>emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
           gi|7269881|emb|CAB79740.1| mRNA cleavage factor
           subunit-like protein [Arabidopsis thaliana]
          Length = 185

 Score =  126 bits (317), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 71/80 (88%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRP+FET MYP+L P+++ PKECTKLFLV+LP+ Q+F VPKN K+LAVPL Q+HEN KTY
Sbjct: 105 WRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTY 164

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+++ +P+LLSKFSFN++E
Sbjct: 165 GPIMSQIPKLLSKFSFNMME 184


>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
           gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
           [Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
           AT4g29820/F27B13_60 [Arabidopsis thaliana]
           gi|21554114|gb|AAM63194.1| mRNA cleavage factor
           subunit-like protein [Arabidopsis thaliana]
           gi|332660282|gb|AEE85682.1| CFIM-25-like protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  126 bits (317), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 71/80 (88%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRP+FET MYP+L P+++ PKECTKLFLV+LP+ Q+F VPKN K+LAVPL Q+HEN KTY
Sbjct: 142 WRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTY 201

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           GP+++ +P+LLSKFSFN++E
Sbjct: 202 GPIMSQIPKLLSKFSFNMME 221


>ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum lycopersicum]
          Length = 202

 Score =  126 bits (316), Expect = 4e-27
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDFET +Y  L P++++PKECTKLFLV+LP S KF VPKNLK++AVPL Q+HEN KTY
Sbjct: 121 WRPDFETLIYLVLPPNIKRPKECTKLFLVRLPESCKFIVPKNLKLIAVPLCQVHENFKTY 180

Query: 229 GPVIAGVPQLLSKFSFN 179
           GP+IAGVPQLLSKFS+N
Sbjct: 181 GPIIAGVPQLLSKFSYN 197


>gb|EYU28364.1| hypothetical protein MIMGU_mgv1a013494mg [Mimulus guttatus]
          Length = 219

 Score =  123 bits (309), Expect = 2e-26
 Identities = 52/80 (65%), Positives = 68/80 (85%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WRPDF+ P++PYL P++ KPKECTKLFLVKLP S++F VPK  ++LAVPL ++H+N +TY
Sbjct: 134 WRPDFDAPLHPYLPPNINKPKECTKLFLVKLPPSRRFIVPKKFRILAVPLCELHDNEQTY 193

Query: 229 GPVIAGVPQLLSKFSFNVIE 170
           G  I+GVPQL+SKFSFN +E
Sbjct: 194 GQTISGVPQLMSKFSFNFVE 213


>ref|XP_003574450.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Brachypodium distachyon]
          Length = 226

 Score =  120 bits (301), Expect = 2e-25
 Identities = 51/81 (62%), Positives = 68/81 (83%)
 Frame = -1

Query: 409 WRPDFETPMYPYLSPSVRKPKECTKLFLVKLPMSQKFSVPKNLKMLAVPLFQIHENHKTY 230
           WR DFE+  +PYL P+ R PKECTK+FL++LPMS++F VP+NLK+LAVPL QIH+N + Y
Sbjct: 146 WRSDFESGPFPYLPPNTRAPKECTKMFLIRLPMSRRFIVPRNLKLLAVPLSQIHDNAQVY 205

Query: 229 GPVIAGVPQLLSKFSFNVIEN 167
           GP+I+G+P LLSKFS NV+ +
Sbjct: 206 GPIISGIPNLLSKFSLNVVRD 226