BLASTX nr result
ID: Cocculus23_contig00024788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024788
(244 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61132.1| hypothetical protein VITISV_004062 [Vitis vinifera] 137 2e-30
emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera] 137 2e-30
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 137 2e-30
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 137 2e-30
emb|CAN64689.1| hypothetical protein VITISV_030189 [Vitis vinifera] 136 3e-30
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 133 2e-29
emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera] 132 5e-29
emb|CAN72204.1| hypothetical protein VITISV_001821 [Vitis vinifera] 130 1e-28
emb|CAN82943.1| hypothetical protein VITISV_001812 [Vitis vinifera] 130 2e-28
emb|CAN61800.1| hypothetical protein VITISV_044293 [Vitis vinifera] 129 3e-28
emb|CAN68045.1| hypothetical protein VITISV_018114 [Vitis vinifera] 128 7e-28
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 128 9e-28
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 128 9e-28
emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group] g... 127 1e-27
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 127 1e-27
emb|CAE01490.1| P0041A24.2 [Oryza sativa Japonica Group] 127 1e-27
emb|CAN61563.1| hypothetical protein VITISV_039566 [Vitis vinifera] 127 2e-27
emb|CAN61562.1| hypothetical protein VITISV_039565 [Vitis vinifera] 127 2e-27
gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subc... 125 5e-27
gb|AAU89218.1| integrase core domain containing protein [Oryza s... 125 5e-27
>emb|CAN61132.1| hypothetical protein VITISV_004062 [Vitis vinifera]
Length = 536
Score = 137 bits (345), Expect = 2e-30
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V H
Sbjct: 385 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 444
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 445 THTQNGLAESFIKRLQLIARP 465
>emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera]
Length = 333
Score = 137 bits (345), Expect = 2e-30
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V H
Sbjct: 89 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 148
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 149 THTQNGLAESFIKRLQLIARP 169
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 137 bits (345), Expect = 2e-30
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V H
Sbjct: 566 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 625
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 626 THTQNGLAESFIKRLQLIARP 646
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 137 bits (345), Expect = 2e-30
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V H
Sbjct: 564 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 623
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 624 THTQNGLAESFIKRLQLIARP 644
>emb|CAN64689.1| hypothetical protein VITISV_030189 [Vitis vinifera]
Length = 292
Score = 136 bits (343), Expect = 3e-30
Identities = 65/81 (80%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
+S+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V H
Sbjct: 89 ISTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 148
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 149 THTQNGLAESFIKRLQLIARP 169
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 133 bits (335), Expect = 2e-29
Identities = 65/81 (80%), Positives = 71/81 (87%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS GIN+E+ V H
Sbjct: 233 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSXGINIEHPVAH 292
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLA S IKR+QLIARP
Sbjct: 293 THTQNGLAXSFIKRLQLIARP 313
>emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera]
Length = 361
Score = 132 bits (332), Expect = 5e-29
Identities = 66/83 (79%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSV-- 174
LS+RN+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DYCMS+GIN+E+ V
Sbjct: 88 LSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYCMSVGINIEHPVAH 147
Query: 175 PHVHTQNGLAESLIKRIQLIARP 243
H HTQNGLAES IKR+QLIARP
Sbjct: 148 THTHTQNGLAESFIKRLQLIARP 170
>emb|CAN72204.1| hypothetical protein VITISV_001821 [Vitis vinifera]
Length = 420
Score = 130 bits (328), Expect = 1e-28
Identities = 62/81 (76%), Positives = 73/81 (90%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+ F +LLAQIIRL+A+FPD+PIK IRLDNAGEF SQTF DYCMS+GI+VEY V H
Sbjct: 329 LSTRNIXFXRLLAQIIRLKARFPDHPIKTIRLDNAGEFSSQTFLDYCMSVGIDVEYLVSH 388
Query: 181 VHTQNGLAESLIKRIQLIARP 243
+TQNGLAESLIKR+QLIA+P
Sbjct: 389 TYTQNGLAESLIKRLQLIAKP 409
>emb|CAN82943.1| hypothetical protein VITISV_001812 [Vitis vinifera]
Length = 817
Score = 130 bits (326), Expect = 2e-28
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LL QIIRLRAQFPD PIK IRLDN GEF SQTF DY MS+GIN+E+ V H
Sbjct: 102 LSTRNVAFARLLTQIIRLRAQFPDYPIKTIRLDNVGEFTSQTFIDYYMSVGINIEHPVAH 161
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 162 THTQNGLAESFIKRLQLIARP 182
>emb|CAN61800.1| hypothetical protein VITISV_044293 [Vitis vinifera]
Length = 811
Score = 129 bits (325), Expect = 3e-28
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+ FA+LLAQIIRLRA FPD PIK IRLDNAGEF QTF DYCMS+GIN+E+ V H
Sbjct: 190 LSTRNVTFARLLAQIIRLRAHFPDYPIKTIRLDNAGEFTYQTFIDYCMSVGINIEHPVAH 249
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IK +QLIARP
Sbjct: 250 THTQNGLAESFIKHLQLIARP 270
>emb|CAN68045.1| hypothetical protein VITISV_018114 [Vitis vinifera]
Length = 313
Score = 128 bits (322), Expect = 7e-28
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+ N+AFA+LLAQIIRLR QFPD PIK IRLDNA EF SQTF DYCMS+GIN+++ V H
Sbjct: 89 LSTCNVAFARLLAQIIRLRVQFPDYPIKTIRLDNADEFTSQTFIDYCMSVGINIKHPVAH 148
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES IKR+QLIARP
Sbjct: 149 THTQNGLAESFIKRLQLIARP 169
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 128 bits (321), Expect = 9e-28
Identities = 61/80 (76%), Positives = 73/80 (91%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN AFAKLLAQII+LRA +PD+PIK+I LDNAGEF S+TF DYCMSIGI+VE+ VPH
Sbjct: 594 LSTRNAAFAKLLAQIIKLRAHYPDHPIKSITLDNAGEFTSKTFDDYCMSIGIDVEHPVPH 653
Query: 181 VHTQNGLAESLIKRIQLIAR 240
VHTQNGLAE+ IKR+Q++AR
Sbjct: 654 VHTQNGLAEAAIKRLQMVAR 673
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 128 bits (321), Expect = 9e-28
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1
Query: 13 NLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPHVHTQ 192
N+AFA+LLAQIIRLRAQFPD PIK IRLDNAGEF SQTF DY MS+GIN+E+ V H HTQ
Sbjct: 471 NVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYXMSVGINIEHPVAHTHTQ 530
Query: 193 NGLAESLIKRIQLIARP 243
NGLAES IKR+QLIARP
Sbjct: 531 NGLAESFIKRLQLIARP 547
>emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group]
gi|38347029|emb|CAD39881.2| OSJNBb0067G11.4 [Oryza
sativa Japonica Group]
Length = 986
Score = 127 bits (320), Expect = 1e-27
Identities = 60/81 (74%), Positives = 75/81 (92%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN AF+KL+AQIIRL+A FPD+ +++IR+DNAGEF+S+ F DYC+++GI VEYSVPH
Sbjct: 492 LSTRNHAFSKLIAQIIRLKASFPDSRVQSIRMDNAGEFRSKAFDDYCLAMGIKVEYSVPH 551
Query: 181 VHTQNGLAESLIKRIQLIARP 243
VHTQNGLAESLIKRI+LIARP
Sbjct: 552 VHTQNGLAESLIKRIKLIARP 572
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 127 bits (320), Expect = 1e-27
Identities = 61/80 (76%), Positives = 73/80 (91%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
+S+RN AFAKLLAQII+LRA PD+PIK+IRLDNAGEF S+TF DYCMSIGI+VE+ VPH
Sbjct: 537 VSTRNAAFAKLLAQIIKLRAHHPDHPIKSIRLDNAGEFTSKTFDDYCMSIGIDVEHPVPH 596
Query: 181 VHTQNGLAESLIKRIQLIAR 240
VHTQNGLAE+ IKR+Q++AR
Sbjct: 597 VHTQNGLAEAAIKRLQMVAR 616
>emb|CAE01490.1| P0041A24.2 [Oryza sativa Japonica Group]
Length = 1376
Score = 127 bits (320), Expect = 1e-27
Identities = 60/81 (74%), Positives = 75/81 (92%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN AF+KL+AQIIRL+A FPD+ +++IR+DNAGEF+S+ F DYC+++GI VEYSVPH
Sbjct: 502 LSTRNHAFSKLIAQIIRLKASFPDSHVQSIRMDNAGEFRSKAFDDYCLAMGIKVEYSVPH 561
Query: 181 VHTQNGLAESLIKRIQLIARP 243
VHTQNGLAESLIKRI+LIARP
Sbjct: 562 VHTQNGLAESLIKRIKLIARP 582
>emb|CAN61563.1| hypothetical protein VITISV_039566 [Vitis vinifera]
Length = 291
Score = 127 bits (319), Expect = 2e-27
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQII+L+AQF D+ IK I LDNAGEF SQTF DYCMS+GINVEY V H
Sbjct: 89 LSTRNIAFARLLAQIIQLKAQFLDHSIKKICLDNAGEFSSQTFLDYCMSVGINVEYLVAH 148
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES+IK +QLIARP
Sbjct: 149 THTQNGLAESIIKHLQLIARP 169
>emb|CAN61562.1| hypothetical protein VITISV_039565 [Vitis vinifera]
Length = 1316
Score = 127 bits (319), Expect = 2e-27
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN+AFA+LLAQII+L+AQF D+ IK I LDNAGEF SQTF DYCMS+GINVEY V H
Sbjct: 526 LSTRNIAFARLLAQIIQLKAQFLDHSIKKICLDNAGEFSSQTFLDYCMSVGINVEYLVAH 585
Query: 181 VHTQNGLAESLIKRIQLIARP 243
HTQNGLAES+IK +QLIARP
Sbjct: 586 THTQNGLAESIIKHLQLIARP 606
>gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 125 bits (315), Expect = 5e-27
Identities = 60/81 (74%), Positives = 74/81 (91%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN F+KL+AQIIRLRA FPDN I++IR+DNAGEF+S+ F DYC+++GI+VE+SVPH
Sbjct: 591 LSTRNHGFSKLIAQIIRLRASFPDNRIQSIRMDNAGEFRSKAFDDYCLAMGISVEHSVPH 650
Query: 181 VHTQNGLAESLIKRIQLIARP 243
VHTQNGLAESLIKRI+ IARP
Sbjct: 651 VHTQNGLAESLIKRIKWIARP 671
>gb|AAU89218.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
Length = 1419
Score = 125 bits (315), Expect = 5e-27
Identities = 60/81 (74%), Positives = 74/81 (91%)
Frame = +1
Query: 1 LSSRNLAFAKLLAQIIRLRAQFPDNPIKNIRLDNAGEFQSQTFFDYCMSIGINVEYSVPH 180
LS+RN F+KL+AQIIRLRA FPDN I++IR+DNAGEF+S+ F DYC+++GI+VE+SVPH
Sbjct: 530 LSTRNHGFSKLIAQIIRLRASFPDNRIQSIRMDNAGEFRSKAFDDYCLAMGISVEHSVPH 589
Query: 181 VHTQNGLAESLIKRIQLIARP 243
VHTQNGLAESLIKRI+ IARP
Sbjct: 590 VHTQNGLAESLIKRIKWIARP 610