BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00024739
         (800 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Popu...   373   e-101
ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citr...   372   e-100
gb|AHB18407.1| pentatricopeptide repeat-containing protein [Goss...   371   e-100
ref|XP_007038424.1| Tetratricopeptide repeat-like superfamily pr...   370   e-100
ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   368   2e-99
ref|XP_007131332.1| hypothetical protein PHAVU_011G004900g [Phas...   351   2e-94
ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containi...   348   1e-93
ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containi...   348   1e-93
ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prun...   347   2e-93
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   345   9e-93
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   345   1e-92
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   340   5e-91
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...   338   2e-90
gb|ACU21163.1| unknown [Glycine max]                                  338   2e-90
ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutr...   335   1e-89
ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, part...   334   2e-89
ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabido...   333   3e-89
ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containi...   328   2e-87
gb|EYU24975.1| hypothetical protein MIMGU_mgv1a026978mg, partial...   327   4e-87

>ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Populus trichocarpa]
           gi|550322722|gb|EEF06534.2| hypothetical protein
           POPTR_0015s14630g [Populus trichocarpa]
          Length = 529

 Score =  373 bits (958), Expect = e-101
 Identities = 186/266 (69%), Positives = 215/266 (80%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PRVLKAC G+G +R+GEAVHRDLVR GF  DGFVLNALVDMYAK
Sbjct: 187 YFQMEEEGVEPDQFTFPRVLKACGGIGLIRIGEAVHRDLVRLGFVNDGFVLNALVDMYAK 246

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR IFDKI  +DS+SWNSMLTGY RHGL+ EAL  F  M+ DG E DS+AVST+
Sbjct: 247 CGDIVKARRIFDKIDCKDSISWNSMLTGYIRHGLIAEALHTFHSMVHDGMELDSVAVSTI 306

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S+  +V  ++HGW++RRG+E + SIANSLI V S   KL  ARWLFD + ++D+VS
Sbjct: 307 LANVSSF-EVAVQIHGWIVRRGMEWDFSIANSLIAVYSNGRKLDRARWLFDHMPKKDIVS 365

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH KD KAL YF+LME     P+ ITFVSLLSACAHLGLV+DG+RLF  MK KY
Sbjct: 366 WNSIISAHCKDLKALTYFELMERDGALPDKITFVSLLSACAHLGLVKDGERLFSLMKAKY 425

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           +I P MEHYACMVNL GRAGLINEAY
Sbjct: 426 QINPIMEHYACMVNLYGRAGLINEAY 451



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
 Frame = +1

Query: 34  DKFTYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKA 201
           D   +  +L+ C  L ++ +G  +HR    +L+R   G    + + LV +Y+ CGD+  A
Sbjct: 95  DTQIFSSLLETCYRLNAIELGVKIHRLIPINLLRRNAG----ISSKLVRLYSSCGDVEVA 150

Query: 202 RLIFDKIGDR--DSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFS 375
             +FD++  R   +  WNS++ GY   GL  +A+ ++  M ++G EPD      VL    
Sbjct: 151 HQVFDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKACG 210

Query: 376 AVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNS 549
            +   ++G  VH  ++R G   +  + N+L+ + +  G +  AR +FD+I  +D +SWNS
Sbjct: 211 GIGLIRIGEAVHRDLVRLGFVNDGFVLNALVDMYAKCGDIVKARRIFDKIDCKDSISWNS 270

Query: 550 IISAH 564
           +++ +
Sbjct: 271 MLTGY 275


>ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citrus clementina]
           gi|557523589|gb|ESR34956.1| hypothetical protein
           CICLE_v10004726mg [Citrus clementina]
          Length = 526

 Score =  372 bits (954), Expect = e-100
 Identities = 184/266 (69%), Positives = 218/266 (81%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PRVLKACAGLG +RVGE VH D VR GFG DGFVLNALVDMYAK
Sbjct: 182 YFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAK 241

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FD+IG++D +S+NSMLTGY  HGLLVEA D+FRGMI +GF+PD +A+S++
Sbjct: 242 CGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSI 301

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S + ++G +VHGWVLRRG+E +L IANSLI+V S  GKL  A WLFD + Q+DVVS
Sbjct: 302 LANASLL-RIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVS 360

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSII AH KD + L+YF+ ME     P+ ITFVSLLSACAHLG V+DG+RLF  M EKY
Sbjct: 361 WNSIIHAHSKDHEVLIYFEQMERDGVLPDHITFVSLLSACAHLGSVKDGERLFSVMVEKY 420

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I PR+EHYACMVNL GRAGLI+EAY
Sbjct: 421 GISPRVEHYACMVNLYGRAGLIDEAY 446



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 101/182 (55%), Gaps = 8/182 (4%)
 Frame = +1

Query: 43  TYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKARLI 210
           T+  +L+ C  L +V  G  +HR    +L+R   G    + + L+ +YA  G I +A  +
Sbjct: 93  TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKG----ISSKLLRLYATFGLIDEAHQV 148

Query: 211 FDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS 384
           FD++ +R + +  WNS+++GY   G   +A+ ++  M ++G EPD      VL   + + 
Sbjct: 149 FDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLG 208

Query: 385 --KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIIS 558
             +VG +VH   +R G   +  + N+L+ + +  G +  AR +FDRI  +D++S+NS+++
Sbjct: 209 LIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLT 268

Query: 559 AH 564
            +
Sbjct: 269 GY 270


>gb|AHB18407.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 522

 Score =  371 bits (952), Expect = e-100
 Identities = 176/266 (66%), Positives = 221/266 (83%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PR LKACAG+GS+ VG+AVHRD+VR GFG D FVLNAL+DMYAK
Sbjct: 180 YFQMEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDVFVLNALIDMYAK 239

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FD I  +D++SWNSMLTGY RHGLL  AL +FRGMI++GFEPDS+ +ST+
Sbjct: 240 CGDIVKARRVFDSIACKDNISWNSMLTGYIRHGLLAGALQVFRGMIQEGFEPDSVTISTI 299

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           LS F ++ K   ++HGWVLRRG+E + S+ N++I+V S  GKL  A WLF R+ +RD+VS
Sbjct: 300 LSSFCSL-KTAAQIHGWVLRRGIEWDTSVVNAMIVVYSNLGKLDGASWLFQRMPERDIVS 358

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIIS H K+P+AL+YF+ M  S T P++ITFV++LSACAHLGLV+DG+RLF  M++KY
Sbjct: 359 WNSIISGHSKNPEALLYFEQMVRSCTSPDSITFVAILSACAHLGLVKDGERLFWLMRKKY 418

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I PRMEHYACM+NL GRAGLI+EA+
Sbjct: 419 GIDPRMEHYACMINLYGRAGLIDEAF 444



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 11/226 (4%)
 Frame = +1

Query: 25  VVPDKFTYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDI 192
           ++ D   +  +L+ C  L S+  G A+HR    +L+R   G    + + L+ +YA  G +
Sbjct: 85  IIIDSEIFSSLLETCYQLKSIDHGIAIHRLVPQNLLRKNTG----ISSKLLRLYATAGRM 140

Query: 193 VKARLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLS 366
             A  +FD++  R+  +  WNS+++GY   G   +AL ++  M ++G EPD       L 
Sbjct: 141 ESAHQVFDQMSKRNEYAFPWNSLISGYAELGQYEDALALYFQMEEEGVEPDRFTFPRALK 200

Query: 367 RFSAVSK--VGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
             + +    VG  VH  V+R+G   ++ + N+LI + +  G +  AR +FD I+ +D +S
Sbjct: 201 ACAGIGSIHVGQAVHRDVVRKGFGNDVFVLNALIDMYAKCGDIVKARRVFDSIACKDNIS 260

Query: 541 WNSIISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHL 669
           WNS+++    H     AL  F+ M +    P+++T  ++LS+   L
Sbjct: 261 WNSMLTGYIRHGLLAGALQVFRGMIQEGFEPDSVTISTILSSFCSL 306



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
 Frame = +1

Query: 316 IKDGFEPDSIAVSTVLSRFSAVSKV--GFEVHGWVLRRGLEQNLSIANSLILVCSAQGKL 489
           +K G   DS   S++L     +  +  G  +H  V +  L +N  I++ L+ + +  G++
Sbjct: 81  VKKGIIIDSEIFSSLLETCYQLKSIDHGIAIHRLVPQNLLRKNTGISSKLLRLYATAGRM 140

Query: 490 YCARWLFDRISQRDVVS--WNSIISAH----QKDPKALVYFQLMEESDTWPNAITFVSLL 651
             A  +FD++S+R+  +  WNS+IS +    Q +    +YFQ MEE    P+  TF   L
Sbjct: 141 ESAHQVFDQMSKRNEYAFPWNSLISGYAELGQYEDALALYFQ-MEEEGVEPDRFTFPRAL 199

Query: 652 SACAHLGLVEDGQ 690
            ACA +G +  GQ
Sbjct: 200 KACAGIGSIHVGQ 212


>ref|XP_007038424.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
            gi|508775669|gb|EOY22925.1| Tetratricopeptide repeat-like
            superfamily protein [Theobroma cacao]
          Length = 773

 Score =  370 bits (950), Expect = e-100
 Identities = 177/266 (66%), Positives = 219/266 (82%)
 Frame = +1

Query: 1    YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
            YFQMEEE V PD++T+PR LKACAG+G +++GEAVHRD+VR GFG DGFVLNAL+DMYAK
Sbjct: 431  YFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGNDGFVLNALIDMYAK 490

Query: 181  CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
            CGDIVKAR +FD I  +D+VSWNSMLTGY RHGLLVEAL++FRGMI++G+EPD +A+ST+
Sbjct: 491  CGDIVKARRVFDNIACKDTVSWNSMLTGYIRHGLLVEALEVFRGMIREGYEPDPVAMSTI 550

Query: 361  LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
            LS   ++ K+  ++HGW+LRRG E NLS+ N+LI+V S  GKL  A WLF RI + DVVS
Sbjct: 551  LSGVWSL-KIALQIHGWILRRGNEWNLSVVNALIVVYSNHGKLDRASWLFHRIPEPDVVS 609

Query: 541  WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
            WNSIIS H K P+ALVYF+ M    T P++ITFV++LSACAHLG V DG++LF  M++KY
Sbjct: 610  WNSIISGHSKRPEALVYFEQMVSGGTLPDSITFVAILSACAHLGFVRDGEQLFSLMRKKY 669

Query: 721  RIRPRMEHYACMVNLLGRAGLINEAY 798
             I P MEHYACMVNL GRAGLI+EA+
Sbjct: 670  AINPIMEHYACMVNLYGRAGLIDEAF 695



 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
 Frame = +1

Query: 46  YPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIFDKIG 225
           +  +L+ C  L S+  G  +H  + +     +  + + L+ +YA CG I  A  +FD++ 
Sbjct: 343 FSSLLETCYQLKSIDQGIKIHNLVPKTLLRKNTGISSKLLRLYASCGHIESAHQVFDEMS 402

Query: 226 DRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS--KVG 393
            R+  +  WNS+++GY   G   +AL ++  M ++G EPD       L   + +   ++G
Sbjct: 403 KRNESAFPWNSLISGYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIG 462

Query: 394 FEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA---H 564
             VH  V+R+G   +  + N+LI + +  G +  AR +FD I+ +D VSWNS+++    H
Sbjct: 463 EAVHRDVVRKGFGNDGFVLNALIDMYAKCGDIVKARRVFDNIACKDTVSWNSMLTGYIRH 522

Query: 565 QKDPKALVYFQLMEESDTWPNAITFVSLLS 654
               +AL  F+ M      P+ +   ++LS
Sbjct: 523 GLLVEALEVFRGMIREGYEPDPVAMSTILS 552



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
 Frame = +1

Query: 316 IKDGFEPDSIAVSTVLSRFSAVSKV--GFEVHGWVLRRGLEQNLSIANSLILVCSAQGKL 489
           +K+G    S   S++L     +  +  G ++H  V +  L +N  I++ L+ + ++ G +
Sbjct: 332 VKNGMNITSEIFSSLLETCYQLKSIDQGIKIHNLVPKTLLRKNTGISSKLLRLYASCGHI 391

Query: 490 YCARWLFDRISQRD--VVSWNSIISAH----QKDPKALVYFQLMEESDTWPNAITFVSLL 651
             A  +FD +S+R+     WNS+IS +    Q +    +YFQ MEE    P+  TF   L
Sbjct: 392 ESAHQVFDEMSKRNESAFPWNSLISGYAELGQYEDALAIYFQ-MEEEGVEPDRYTFPRAL 450

Query: 652 SACAHLGLVEDGQ 690
            ACA +GL++ G+
Sbjct: 451 KACAGIGLIQIGE 463


>ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Citrus sinensis]
          Length = 526

 Score =  369 bits (947), Expect = e-100
 Identities = 183/266 (68%), Positives = 218/266 (81%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PRVLKACAGLG +RVGE VH D VR GFG DGFVLNALVDMYAK
Sbjct: 182 YFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAK 241

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FD+IG++D +S+NSMLTGY  HGLLVEA D+FRGMI +GF+PD +A+S++
Sbjct: 242 CGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSI 301

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S + ++G +VHGWVLRRG+E +L IANSLI+V S  GKL  A WLFD + Q+DVVS
Sbjct: 302 LANASLL-RIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVS 360

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSII AH KD +AL+YF+ ME     P+ +TFVSLLSACAHLG V+ G+RLF  M EKY
Sbjct: 361 WNSIIHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I PR+EHYACMVNL GRAGLI+EAY
Sbjct: 421 GISPRVEHYACMVNLYGRAGLIDEAY 446



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 101/182 (55%), Gaps = 8/182 (4%)
 Frame = +1

Query: 43  TYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKARLI 210
           T+  +L+ C  L +V  G  +HR    +L+R   G    + + L+ +YA  G I +A  +
Sbjct: 93  TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKG----ISSKLLRLYATFGLIDEAHQV 148

Query: 211 FDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS 384
           FD++ +R + +  WNS+++GY   G   +A+ ++  M ++G EPD      VL   + + 
Sbjct: 149 FDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLG 208

Query: 385 --KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIIS 558
             +VG +VH   +R G   +  + N+L+ + +  G +  AR +FDRI  +D++S+NS+++
Sbjct: 209 LIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLT 268

Query: 559 AH 564
            +
Sbjct: 269 GY 270


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  368 bits (944), Expect = 2e-99
 Identities = 181/266 (68%), Positives = 218/266 (81%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE VVPD+FT+PRVLKAC G+GS+ VGE VHR +VR GF  DGFVLNALVDMYAK
Sbjct: 170 YFQMEEEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAK 229

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FDKI  RDSVSWNSMLTGY RHGL ++AL +FR M++ GFEPD++A+STV
Sbjct: 230 CGDIVKARKVFDKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTV 289

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           ++   ++   G ++HGWVLRRG++ NLSIANSLI++ S  GKL  A WLFD + +RDVVS
Sbjct: 290 VTGVPSLKLAG-QIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVS 348

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH+KD KA+ YF  M+++D  P+ +TFVSLLSACAHLGLV+DG+ LF  M+E Y
Sbjct: 349 WNSIISAHRKDLKAITYFSRMQKADVLPDVVTFVSLLSACAHLGLVKDGEGLFSMMREDY 408

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            + P MEHYACMVNL GRAGLI EAY
Sbjct: 409 GMIPSMEHYACMVNLYGRAGLIEEAY 434



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
 Frame = +1

Query: 16  EEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIV 195
           ++ +  D   +  +L+ C  L +   G  +HR +  +       + + L+ +YA  G I 
Sbjct: 72  QDGITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSSKLLRLYASIGRIE 131

Query: 196 KARLIFDKIG--DRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSR 369
           +A  +FD++   +R + +WNS+++GY   GL  +A+ ++  M ++G  PD      VL  
Sbjct: 132 EAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRVLKA 191

Query: 370 FSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSW 543
              +    VG EVH  V+R G   +  + N+L+ + +  G +  AR +FD+I  RD VSW
Sbjct: 192 CGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCRDSVSW 251

Query: 544 NSIISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGL 675
           NS+++    H    +AL  F+ M +    P+A+   ++++    L L
Sbjct: 252 NSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVVTGVPSLKL 298


>ref|XP_007131332.1| hypothetical protein PHAVU_011G004900g [Phaseolus vulgaris]
           gi|561004332|gb|ESW03326.1| hypothetical protein
           PHAVU_011G004900g [Phaseolus vulgaris]
          Length = 522

 Score =  351 bits (900), Expect = 2e-94
 Identities = 174/266 (65%), Positives = 217/266 (81%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V PD FT+PRVLK CAG+GSVRVGE VHR LVRAGF TDGFVLNALVDMY+K
Sbjct: 177 YFQMVEEGVEPDLFTFPRVLKVCAGIGSVRVGEEVHRHLVRAGFATDGFVLNALVDMYSK 236

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKA+ IFDK+  RDS+SWNSMLT Y  HGL V A+++FR MI DG EPDS++VST+
Sbjct: 237 CGDIVKAQKIFDKMPHRDSISWNSMLTAYVHHGLEVGAVNIFRQMILDGCEPDSVSVSTI 296

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S+   +G ++HGWV+RRGL+ NLSIANSL+++ S+ G+L  ARW+F+ + +RDVVS
Sbjct: 297 LTGVSSPC-LGVQIHGWVIRRGLDWNLSIANSLMVMYSSHGRLEKARWIFNLMPERDVVS 355

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH K  +AL +F+ MEE+   P+ ITFVS+LSACA+LGLV++G+R+F  M  K+
Sbjct: 356 WNSIISAHCKRREALEFFEQMEEAGVEPDKITFVSVLSACAYLGLVKEGERVFALMSAKH 415

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           +I+P MEHY CMVNL GRAGLI +AY
Sbjct: 416 KIKPIMEHYGCMVNLYGRAGLIKKAY 441



 Score =  100 bits (250), Expect = 5e-19
 Identities = 64/218 (29%), Positives = 120/218 (55%), Gaps = 11/218 (5%)
 Frame = +1

Query: 34  DKFTYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKA 201
           D   Y  +L+ C  L ++R G  +HR     L+   FG    + + L+ +YA CG +  A
Sbjct: 85  DPEIYASLLEICYRLQAIRPGIRLHRLIPTSLLHRNFG----ISSKLLRLYAACGLVDDA 140

Query: 202 RLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFS 375
             +FD++  RD+ +  WNS+++GY + GL  +A+ ++  M+++G EPD      VL   +
Sbjct: 141 HELFDQMAKRDTSAFPWNSLISGYAQMGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 200

Query: 376 AVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNS 549
            +   +VG EVH  ++R G   +  + N+L+ + S  G +  A+ +FD++  RD +SWNS
Sbjct: 201 GIGSVRVGEEVHRHLVRAGFATDGFVLNALVDMYSKCGDIVKAQKIFDKMPHRDSISWNS 260

Query: 550 IISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLS 654
           +++A   H  +  A+  F+ M      P++++  ++L+
Sbjct: 261 MLTAYVHHGLEVGAVNIFRQMILDGCEPDSVSVSTILT 298


>ref|XP_004500471.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cicer arietinum]
          Length = 520

 Score =  348 bits (893), Expect = 1e-93
 Identities = 174/266 (65%), Positives = 213/266 (80%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V PD FT+PRVLK C G+GSV+VGE VHR +VR+GFG DGFVLNALVDMY+K
Sbjct: 176 YFQMVEEGVEPDLFTFPRVLKVCGGIGSVQVGEEVHRHIVRSGFGNDGFVLNALVDMYSK 235

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +F+KI  RDSVSWNSML  Y  HGL VEA+++FR M+ +G  PD  ++S +
Sbjct: 236 CGDIVKARKVFNKIPFRDSVSWNSMLAAYVHHGLEVEAINIFRQMLLEGKRPDFFSISVI 295

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S++  VG ++HGWV+RRG+E NLSIANSLI+V S  G+L  AR +F+ + +RDVVS
Sbjct: 296 LTGVSSLD-VGVQIHGWVIRRGVEWNLSIANSLIVVYSNHGRLDKARSIFNLMPERDVVS 354

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH K P+A+ YF+ MEE+   P+ ITFVSLLSACAHLGLV+DG+RLF  M EKY
Sbjct: 355 WNSIISAHCKHPEAIGYFEKMEEAGEVPDKITFVSLLSACAHLGLVKDGERLFALMCEKY 414

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           +I+P MEHY CMVNL GRAGLI +AY
Sbjct: 415 KIKPIMEHYGCMVNLCGRAGLIEKAY 440



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
 Frame = +1

Query: 16  EEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIV 195
           E+ +  D   Y  +L+ C    ++  G  +HR +       +  + + LV +YA  G + 
Sbjct: 78  EKGITIDTEIYASLLETCYRFQAINHGIRLHRLIPPTLLHRNVGISSKLVRLYASFGHMD 137

Query: 196 KARLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSR 369
            A  +FD++  RD  +  WNS+++GY + GL  +A+ ++  M+++G EPD      VL  
Sbjct: 138 DAHDLFDQMTKRDMYAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197

Query: 370 FSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSW 543
              +   +VG EVH  ++R G   +  + N+L+ + S  G +  AR +F++I  RD VSW
Sbjct: 198 CGGIGSVQVGEEVHRHIVRSGFGNDGFVLNALVDMYSKCGDIVKARKVFNKIPFRDSVSW 257

Query: 544 NSIISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHL 669
           NS+++A   H  + +A+  F+ M      P+  +   +L+  + L
Sbjct: 258 NSMLAAYVHHGLEVEAINIFRQMLLEGKRPDFFSISVILTGVSSL 302


>ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 522

 Score =  348 bits (893), Expect = 1e-93
 Identities = 173/266 (65%), Positives = 209/266 (78%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PRVLKAC G+G V+VGEAVHR LVR GF  D FVLNALVDMYAK
Sbjct: 178 YFQMEEEGVEPDRFTFPRVLKACGGIGFVQVGEAVHRHLVRLGFVGDRFVLNALVDMYAK 237

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDI KAR +FDKIG RD VSWN+MLT Y RHGLL++ALD+F  M+K+ F+PDS+A+S +
Sbjct: 238 CGDIGKARKVFDKIGSRDKVSWNTMLTAYMRHGLLLQALDIFHQMVKERFQPDSVAISAI 297

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           LS   ++  V  ++HGW +R+G+E NLS  NSLI   S  GKL  AR LF ++ ++DVV+
Sbjct: 298 LSEVPSLELV-VQIHGWAIRQGVEWNLSTVNSLIAAYSNHGKLRQARRLFCQMPEKDVVT 356

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WN+IISAH K  +ALVYF+ ME +   P+AITFVS+LS CAHL LV+DG+RLF  MK +Y
Sbjct: 357 WNTIISAHSKSREALVYFEQMESAGALPDAITFVSMLSVCAHLSLVKDGERLFSIMKNRY 416

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           RI P MEHYACMVNL GRAGLI EAY
Sbjct: 417 RISPIMEHYACMVNLYGRAGLIKEAY 442



 Score =  100 bits (250), Expect = 5e-19
 Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 11/226 (4%)
 Frame = +1

Query: 34  DKFTYPRVLKACAGLGSV----RVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKA 201
           D  T+  +L+ C  L ++    RV   + R+L+R   G      + L+ +YA CG + +A
Sbjct: 86  DTETFASLLETCYKLDAMDYCLRVHRLIPRNLLRRNVGLS----SKLLRLYASCGFVEEA 141

Query: 202 RLIFDKIGDRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFS 375
             +FD++  RD  + +WNS+++GY   GL  +A+ ++  M ++G EPD      VL    
Sbjct: 142 HQVFDEMPKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRFTFPRVLKACG 201

Query: 376 AVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNS 549
            +   +VG  VH  ++R G   +  + N+L+ + +  G +  AR +FD+I  RD VSWN+
Sbjct: 202 GIGFVQVGEAVHRHLVRLGFVGDRFVLNALVDMYAKCGDIGKARKVFDKIGSRDKVSWNT 261

Query: 550 IISAHQKDP---KALVYFQLMEESDTWPNAITFVSLLSACAHLGLV 678
           +++A+ +     +AL  F  M +    P+++   ++LS    L LV
Sbjct: 262 MLTAYMRHGLLLQALDIFHQMVKERFQPDSVAISAILSEVPSLELV 307


>ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
           gi|462415781|gb|EMJ20518.1| hypothetical protein
           PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score =  347 bits (891), Expect = 2e-93
 Identities = 166/266 (62%), Positives = 209/266 (78%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD+FT+PRVLKAC G+G +++GEAVHR +VR G   D FVLNALVDMYAK
Sbjct: 175 YFQMEEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAK 234

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FDKI  RD VSWN+MLT Y RHGLL +ALD+F  M+ +G + DS+A+ST+
Sbjct: 235 CGDIVKARKVFDKITSRDHVSWNTMLTSYMRHGLLSQALDIFHEMLHEGHQADSVAISTI 294

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L    +  ++  ++HGWV+R+G+E NLSIAN+LI   S   KL  ARWLF  +S+RDV++
Sbjct: 295 LGAAESSLEIVIQIHGWVIRQGVEWNLSIANALIAAYSNHRKLNRARWLFCHMSERDVIT 354

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WN++ISAH K P+AL++F+ ME S   P++ITFVS+LS CAHLGLV+DG+RL+  MK +Y
Sbjct: 355 WNTMISAHSKSPEALLFFEQMESSGALPDSITFVSILSTCAHLGLVKDGERLYSVMKNRY 414

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           RI P MEHYACMVNL GRAG I EAY
Sbjct: 415 RISPIMEHYACMVNLYGRAGRIREAY 440



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 7/215 (3%)
 Frame = +1

Query: 34  DKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIF 213
           D  T+  +L+ C    ++  G  VHR + R+    +  + + L+ +YA  G I +A  +F
Sbjct: 83  DTETFASLLETCYQFQAMDYGLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEAHQVF 142

Query: 214 DKIGDRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS- 384
           D++  RD  + +WNS+++GY   GL  +A+ ++  M ++G EPD      VL     +  
Sbjct: 143 DEMPKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRFTFPRVLKACGGIGF 202

Query: 385 -KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA 561
            ++G  VH  ++R GL  +  + N+L+ + +  G +  AR +FD+I+ RD VSWN+++++
Sbjct: 203 IQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFDKITSRDHVSWNTMLTS 262

Query: 562 HQKD---PKALVYFQLMEESDTWPNAITFVSLLSA 657
           + +     +AL  F  M       +++   ++L A
Sbjct: 263 YMRHGLLSQALDIFHEMLHEGHQADSVAISTILGA 297



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
 Frame = +1

Query: 391 GFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDV--VSWNSIISAH 564
           G  VH  + R  L +N+ I++ L+ + ++ G +  A  +FD + +RDV   +WNS+IS +
Sbjct: 103 GLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEAHQVFDEMPKRDVSAFAWNSLISGY 162

Query: 565 QK-----DPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQ 690
            +     D  AL YFQ MEE    P+  TF  +L AC  +G ++ G+
Sbjct: 163 AELGLYEDAMAL-YFQ-MEEEGVEPDRFTFPRVLKACGGIGFIQIGE 207


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  345 bits (886), Expect = 9e-93
 Identities = 169/266 (63%), Positives = 212/266 (79%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD FT+PRVLKAC G+GS+++GEAVHR +VR+GF  D FVLNALVDMY+K
Sbjct: 145 YFQMEEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSK 204

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CG IV+AR +FD+I  +D VSWNSMLTGY RHGL  EALD+F  MI++G+EPDS+A+ST+
Sbjct: 205 CGCIVRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTL 264

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           LS  S++ K    +HGWV+R G+E NLSIANSLI++ +  GKL  A+WLF ++ Q+D+VS
Sbjct: 265 LSNISSM-KFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVS 323

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH    +AL YF++ME     P+ +TFVSLLS CAHLGLV++G +L+  MK KY
Sbjct: 324 WNSIISAHFNSAEALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGGKLYFLMKGKY 383

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            IRP +EHYACMVNL GRAG+I EAY
Sbjct: 384 GIRPTIEHYACMVNLYGRAGMIEEAY 409



 Score =  100 bits (250), Expect = 5e-19
 Identities = 66/222 (29%), Positives = 123/222 (55%), Gaps = 11/222 (4%)
 Frame = +1

Query: 22  FVVPDKFTYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGD 189
           F+ P+ F+   +L+ C  L ++  G  +HR    +L+R   G    + + L+ +YA  G 
Sbjct: 51  FIDPEIFS--SLLELCYQLQAIHHGIRIHRLIPTNLLRRNVG----ISSKLLRLYASFGY 104

Query: 190 IVKARLIFDKIGDRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVL 363
           +  A  +FD++G+R+  + +WNS+++GY   GL  +AL ++  M ++G EPD+     VL
Sbjct: 105 MEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVL 164

Query: 364 SRFSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVV 537
                +   ++G  VH  V+R G   ++ + N+L+ + S  G +  AR +FD+I  +D+V
Sbjct: 165 KACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIV 224

Query: 538 SWNSIISAHQKDP---KALVYFQLMEESDTWPNAITFVSLLS 654
           SWNS+++ + +     +AL  F  M +    P+++   +LLS
Sbjct: 225 SWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS 266


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  345 bits (885), Expect = 1e-92
 Identities = 169/266 (63%), Positives = 211/266 (79%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQMEEE V PD FT+PRVLKAC G+GS+++GEAVHR +VR+GF  D FVLNALVDMY+K
Sbjct: 145 YFQMEEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSK 204

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CG IV+AR +FD+I  +D VSWNSMLTGY RHGL  EALD+F  MI++G+EPDS+A+ST+
Sbjct: 205 CGCIVRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTL 264

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           LS  S++ K    +HGWV+R G+E NLSIANSLI++ +  GKL  A+WLF ++ Q+D+VS
Sbjct: 265 LSNISSM-KFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVS 323

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH    +AL YF++ME     P+ +TFVSLLS CAHLGLV++G  L+  MK KY
Sbjct: 324 WNSIISAHFNSAEALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGXELYFLMKGKY 383

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            IRP +EHYACMVNL GRAG+I EAY
Sbjct: 384 GIRPTIEHYACMVNLYGRAGMIEEAY 409



 Score =  100 bits (250), Expect = 5e-19
 Identities = 66/222 (29%), Positives = 123/222 (55%), Gaps = 11/222 (4%)
 Frame = +1

Query: 22  FVVPDKFTYPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGD 189
           F+ P+ F+   +L+ C  L ++  G  +HR    +L+R   G    + + L+ +YA  G 
Sbjct: 51  FIDPEIFS--SLLELCYQLQAIHHGIRIHRLIPTNLLRRNVG----ISSKLLRLYASFGY 104

Query: 190 IVKARLIFDKIGDRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVL 363
           +  A  +FD++G+R+  + +WNS+++GY   GL  +AL ++  M ++G EPD+     VL
Sbjct: 105 MEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVL 164

Query: 364 SRFSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVV 537
                +   ++G  VH  V+R G   ++ + N+L+ + S  G +  AR +FD+I  +D+V
Sbjct: 165 KACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIV 224

Query: 538 SWNSIISAHQKDP---KALVYFQLMEESDTWPNAITFVSLLS 654
           SWNS+++ + +     +AL  F  M +    P+++   +LLS
Sbjct: 225 SWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS 266


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
            lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
            ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  340 bits (871), Expect = 5e-91
 Identities = 163/266 (61%), Positives = 214/266 (80%)
 Frame = +1

Query: 1    YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
            YFQM E+ V PD+FT+PRVLKAC G+GSV++GEA+HRDLV+AGFG D  VLNALVDMYAK
Sbjct: 414  YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAK 473

Query: 181  CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
            CGDIVKAR +FD I ++D VSWNSMLTGY  HGLL EALD+FR M+++G +PD +A+S+V
Sbjct: 474  CGDIVKARNVFDMIPNKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIDPDKVAISSV 533

Query: 361  LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
            L+R  +  K G ++HGWV+RRG+E  LS+AN+LI++ S +G+L  A ++FD++ +RD VS
Sbjct: 534  LARVLSF-KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 592

Query: 541  WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
            WN+IISAH +D     YF+ M+ +D  P+ ITFVS+LS CA+ G+VEDG+RLF  M ++Y
Sbjct: 593  WNAIISAHSRDSNGFKYFEQMQHADAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 652

Query: 721  RIRPRMEHYACMVNLLGRAGLINEAY 798
             I P+MEHYACMVNL GRAG++ EAY
Sbjct: 653  GINPKMEHYACMVNLYGRAGMMEEAY 678



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
 Frame = +1

Query: 46  YPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIFDKIG 225
           +  +L+ C  L ++  G  VH  +       +  + + LV +YA CG    A  +FD++ 
Sbjct: 326 FASLLETCYNLRAIDHGVRVHHLIPPYLLRNNVGISSKLVRLYASCGYAEVAHEVFDRMS 385

Query: 226 DRDS--VSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS--KVG 393
            R+S   +WNS+++GY   G   +A+ ++  M +DG +PD      VL     +   ++G
Sbjct: 386 KRESSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 445

Query: 394 FEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA---H 564
             +H  +++ G   ++ + N+L+ + +  G +  AR +FD I  +D VSWNS+++    H
Sbjct: 446 EAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKARNVFDMIPNKDYVSWNSMLTGYLHH 505

Query: 565 QKDPKALVYFQLMEESDTWPNAITFVSLLS 654
               +AL  F+LM ++   P+ +   S+L+
Sbjct: 506 GLLHEALDIFRLMVQNGIDPDKVAISSVLA 535


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  338 bits (866), Expect = 2e-90
 Identities = 166/266 (62%), Positives = 211/266 (79%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V  D FT+PRVLK CAG+GSV+VGE VHR  +RAGF  DGF+LNALVDMY+K
Sbjct: 181 YFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSK 240

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FDK+  RD VSWNSMLT Y  HGL V+A+++FR M+ +G EPDS+++STV
Sbjct: 241 CGDIVKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTV 300

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S++  +G ++HGWV+ +G E NLSIANSLI++ S  G+L  ARW+F+ + +RDVVS
Sbjct: 301 LTGVSSLG-LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVS 359

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH K  +AL +F+ ME +   P+ ITFVS+LSACA+LGL++DG+RLF  M  KY
Sbjct: 360 WNSIISAHCKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDGERLFALMCGKY 419

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           +I+P MEHY CMVNL GRAGLI +AY
Sbjct: 420 KIKPIMEHYGCMVNLYGRAGLIKKAY 445



 Score =  100 bits (249), Expect = 6e-19
 Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 7/227 (3%)
 Frame = +1

Query: 16  EEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIV 195
           E+ +  D   Y  +L+ C    ++  G  VHR +  +    +  + + L+ +YA CG + 
Sbjct: 83  EKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLD 142

Query: 196 KARLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSR 369
            A  +FD++  RD+ +  WNS+++GY + G   EA+ ++  M+++G E D      VL  
Sbjct: 143 DAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKV 202

Query: 370 FSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSW 543
            + +   +VG EVH   +R G   +  I N+L+ + S  G +  AR +FD++  RD VSW
Sbjct: 203 CAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSW 262

Query: 544 NSIISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGL 675
           NS+++A   H  + +A+  F+ M      P++++  ++L+  + LGL
Sbjct: 263 NSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLGL 309


>gb|ACU21163.1| unknown [Glycine max]
          Length = 481

 Score =  338 bits (866), Expect = 2e-90
 Identities = 166/266 (62%), Positives = 211/266 (79%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V  D FT+PRVLK CAG+GSV+VGE VHR  +RAGF  DGF+LNALVDMY+K
Sbjct: 181 YFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSK 240

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FDK+  RD VSWNSMLT Y  HGL V+A+++FR M+ +G EPDS+++STV
Sbjct: 241 CGDIVKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTV 300

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+  S++  +G ++HGWV+ +G E NLSIANSLI++ S  G+L  ARW+F+ + +RDVVS
Sbjct: 301 LTGVSSLG-LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVS 359

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH K  +AL +F+ ME +   P+ ITFVS+LSACA+LGL++DG+RLF  M  KY
Sbjct: 360 WNSIISAHCKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDGERLFALMCGKY 419

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
           +I+P MEHY CMVNL GRAGLI +AY
Sbjct: 420 KIKPIMEHYGCMVNLYGRAGLIKKAY 445



 Score =  100 bits (249), Expect = 6e-19
 Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 7/227 (3%)
 Frame = +1

Query: 16  EEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIV 195
           E+ +  D   Y  +L+ C    ++  G  VHR +  +    +  + + L+ +YA CG + 
Sbjct: 83  EKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLD 142

Query: 196 KARLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSR 369
            A  +FD++  RD+ +  WNS+++GY + G   EA+ ++  M+++G E D      VL  
Sbjct: 143 DAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKV 202

Query: 370 FSAVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSW 543
            + +   +VG EVH   +R G   +  I N+L+ + S  G +  AR +FD++  RD VSW
Sbjct: 203 CAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSW 262

Query: 544 NSIISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGL 675
           NS+++A   H  + +A+  F+ M      P++++  ++L+  + LGL
Sbjct: 263 NSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLGL 309


>ref|XP_006413323.1| hypothetical protein EUTSA_v10024921mg [Eutrema salsugineum]
           gi|557114493|gb|ESQ54776.1| hypothetical protein
           EUTSA_v10024921mg [Eutrema salsugineum]
          Length = 523

 Score =  335 bits (859), Expect = 1e-89
 Identities = 160/266 (60%), Positives = 210/266 (78%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V PD+FT+PRVLKAC G+GS+++GEA+HRDLV+ G+G D +VLNALVDMYAK
Sbjct: 179 YFQMAEEGVKPDRFTFPRVLKACGGIGSIQIGEAIHRDLVKQGYGYDVYVLNALVDMYAK 238

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVK R +FD I ++D VSWNSMLT Y  HGLL EA+ +FR M++DG EPD +A+S+V
Sbjct: 239 CGDIVKGRNVFDMIPNKDYVSWNSMLTSYLHHGLLQEAMHIFRLMVQDGIEPDKVAISSV 298

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+R  +  K G ++HGW +RRG+E  LS+ N+LI++ S +G+L  A ++FD++ +RD+VS
Sbjct: 299 LARVLSF-KHGRQLHGWAIRRGMECELSVVNALIVLYSKRGQLSQACFIFDQMLERDIVS 357

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WN+IISAH KD   L YF+ M+ ++  P+ ITFVS+LS CA+ G+VEDG+RLF  M E Y
Sbjct: 358 WNAIISAHSKDSNGLKYFEQMQRANARPDVITFVSVLSLCANTGMVEDGERLFSLMSEGY 417

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I PRMEHYACMVNL GRAG++ EAY
Sbjct: 418 GISPRMEHYACMVNLYGRAGMMEEAY 443



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 58/214 (27%), Positives = 112/214 (52%), Gaps = 11/214 (5%)
 Frame = +1

Query: 46  YPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIF 213
           +  +L+ C  L ++ +G  VHR     L+R   G    + + LV +YA CG    A  +F
Sbjct: 91  FASLLETCYSLRAIDLGVRVHRLIPVHLLRNNLG----ISSKLVRLYASCGYAEVAHEVF 146

Query: 214 DKIGDRDS--VSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS- 384
           D++  R S   +WNS+++GY   G   +A+ ++  M ++G +PD      VL     +  
Sbjct: 147 DRMSKRKSSAFAWNSLISGYAESGQYEDAMALYFQMAEEGVKPDRFTFPRVLKACGGIGS 206

Query: 385 -KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA 561
            ++G  +H  ++++G   ++ + N+L+ + +  G +   R +FD I  +D VSWNS++++
Sbjct: 207 IQIGEAIHRDLVKQGYGYDVYVLNALVDMYAKCGDIVKGRNVFDMIPNKDYVSWNSMLTS 266

Query: 562 ---HQKDPKALVYFQLMEESDTWPNAITFVSLLS 654
              H    +A+  F+LM +    P+ +   S+L+
Sbjct: 267 YLHHGLLQEAMHIFRLMVQDGIEPDKVAISSVLA 300


>ref|XP_006282784.1| hypothetical protein CARUB_v10006372mg, partial [Capsella rubella]
           gi|482551489|gb|EOA15682.1| hypothetical protein
           CARUB_v10006372mg, partial [Capsella rubella]
          Length = 533

 Score =  334 bits (857), Expect = 2e-89
 Identities = 159/266 (59%), Positives = 213/266 (80%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM E+ V PD+FT+PRVLKACAG+GS+++G+A+HRDLV+AGFG D +VLNALVDMYAK
Sbjct: 189 YFQMAEDGVKPDRFTFPRVLKACAGIGSIQIGDAIHRDLVKAGFGYDVYVLNALVDMYAK 248

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVK R +FD I  +D VSWNSMLTGY  HGLL+EALD+FR M++DG EPD +A+S+V
Sbjct: 249 CGDIVKGRNVFDMIPHKDYVSWNSMLTGYLHHGLLLEALDIFRLMVQDGIEPDKVAISSV 308

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+R  +  K G ++HGWV+RRG+E  LS+AN+LI+  S +G+L  A ++FD++ +RD VS
Sbjct: 309 LARVLSF-KHGRQLHGWVIRRGIEWELSVANALIVFYSKRGQLGQACFIFDQMPERDTVS 367

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WN+I+SAH KD   L YF+ M+ ++   + ITFVS+LS CA+ G+++ G+RLF  M ++Y
Sbjct: 368 WNAILSAHSKDSNGLKYFEQMQRANARLDGITFVSVLSICANTGMIQVGERLFSLMSKEY 427

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I P+MEHYACMVNL GRAG++ EAY
Sbjct: 428 GIDPKMEHYACMVNLYGRAGMVEEAY 453



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 59/214 (27%), Positives = 109/214 (50%), Gaps = 11/214 (5%)
 Frame = +1

Query: 46  YPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIF 213
           +  +L+ C  L ++  G  VH      L+R   G    + + LV +YA CG    A  +F
Sbjct: 101 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLG----ISSKLVRLYASCGYTEVAHEVF 156

Query: 214 DKIGDRD--SVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS- 384
           D++  R+    +WNS+++GY   G   +AL ++  M +DG +PD      VL   + +  
Sbjct: 157 DRMSKRELSPFAWNSLISGYAELGQYEDALALYFQMAEDGVKPDRFTFPRVLKACAGIGS 216

Query: 385 -KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA 561
            ++G  +H  +++ G   ++ + N+L+ + +  G +   R +FD I  +D VSWNS+++ 
Sbjct: 217 IQIGDAIHRDLVKAGFGYDVYVLNALVDMYAKCGDIVKGRNVFDMIPHKDYVSWNSMLTG 276

Query: 562 ---HQKDPKALVYFQLMEESDTWPNAITFVSLLS 654
              H    +AL  F+LM +    P+ +   S+L+
Sbjct: 277 YLHHGLLLEALDIFRLMVQDGIEPDKVAISSVLA 310


>ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat protein OTP70 [Arabidopsis
           thaliana]
          Length = 527

 Score =  333 bits (855), Expect = 3e-89
 Identities = 162/266 (60%), Positives = 212/266 (79%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM E+ V PD+FT+PRVLKAC G+GSV++GEA+HRDLV+ GFG D +VLNALV MYAK
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKAR +FD I  +D VSWNSMLTGY  HGLL EALD+FR M+++G EPD +A+S+V
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+R  +  K G ++HGWV+RRG+E  LS+AN+LI++ S +G+L  A ++FD++ +RD VS
Sbjct: 303 LARVLSF-KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WN+IISAH K+   L YF+ M  ++  P+ ITFVS+LS CA+ G+VEDG+RLF  M ++Y
Sbjct: 362 WNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 421

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I P+MEHYACMVNL GRAG++ EAY
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAY 447



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 11/214 (5%)
 Frame = +1

Query: 46  YPRVLKACAGLGSVRVGEAVHR----DLVRAGFGTDGFVLNALVDMYAKCGDIVKARLIF 213
           +  +L+ C  L ++  G  VH      L+R   G    + + LV +YA CG    A  +F
Sbjct: 95  FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLG----ISSKLVRLYASCGYAEVAHEVF 150

Query: 214 DKIGDRDS--VSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSAVS- 384
           D++  RDS   +WNS+++GY   G   +A+ ++  M +DG +PD      VL     +  
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210

Query: 385 -KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSIISA 561
            ++G  +H  +++ G   ++ + N+L+++ +  G +  AR +FD I  +D VSWNS+++ 
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270

Query: 562 ---HQKDPKALVYFQLMEESDTWPNAITFVSLLS 654
              H    +AL  F+LM ++   P+ +   S+L+
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304


>ref|XP_004234452.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Solanum lycopersicum]
          Length = 539

 Score =  328 bits (840), Expect = 2e-87
 Identities = 159/266 (59%), Positives = 206/266 (77%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           YFQM EE V PD +T+PR LKAC G+G + VGE VHR ++R GFG++GF+LNALVDMY+K
Sbjct: 188 YFQMVEEGVEPDCYTFPRALKACGGVGLIHVGEEVHRHVIRRGFGSNGFILNALVDMYSK 247

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDIVKA+ +FD+IG +D VSWNSML GY RH L+ +AL++FR MI+DG EPDS+++S +
Sbjct: 248 CGDIVKAQKLFDQIGTKDLVSWNSMLIGYMRHELVTKALNLFRLMIRDGIEPDSVSISAL 307

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L      S +G ++HGWV RRG  Q LSI NSL+   + Q KL   RWLF+ + +RDVVS
Sbjct: 308 LVARIPFS-IGKQIHGWVHRRGTNQELSIVNSLVDFYADQKKLKQVRWLFENMHERDVVS 366

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNS+ISAH K  +AL+YF+ M +S   P+++TFVSLLSACAHLG +ED +RLF  M+E+Y
Sbjct: 367 WNSVISAHSKHCEALLYFEKMVKSGDLPDSVTFVSLLSACAHLGKLEDAERLFRAMQERY 426

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            I PRMEHY+CMVNL GR GLI++A+
Sbjct: 427 DISPRMEHYSCMVNLYGRLGLIDKAF 452



 Score =  108 bits (271), Expect = 2e-21
 Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 11/219 (5%)
 Frame = +1

Query: 34  DKFTYPRVLKACAGLGS----VRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKA 201
           D   +  +L+ C  L +    VRV E +   L+R   G    + + L+ +YA  G   KA
Sbjct: 96  DPQIFASLLETCFQLQAIDHGVRVHELIPEKLLRKNVG----ISSKLIRLYACSGQTQKA 151

Query: 202 RLIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFS 375
             +FDK+  R++ +  WNS+++GY   GL  +AL M+  M+++G EPD       L    
Sbjct: 152 HQLFDKMPKRNTSAFPWNSIISGYAEKGLFEDALAMYFQMVEEGVEPDCYTFPRALKACG 211

Query: 376 AVS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNS 549
            V    VG EVH  V+RRG   N  I N+L+ + S  G +  A+ LFD+I  +D+VSWNS
Sbjct: 212 GVGLIHVGEEVHRHVIRRGFGSNGFILNALVDMYSKCGDIVKAQKLFDQIGTKDLVSWNS 271

Query: 550 II---SAHQKDPKALVYFQLMEESDTWPNAITFVSLLSA 657
           ++     H+   KAL  F+LM      P++++  +LL A
Sbjct: 272 MLIGYMRHELVTKALNLFRLMIRDGIEPDSVSISALLVA 310


>gb|EYU24975.1| hypothetical protein MIMGU_mgv1a026978mg, partial [Mimulus
           guttatus]
          Length = 488

 Score =  327 bits (837), Expect = 4e-87
 Identities = 157/266 (59%), Positives = 207/266 (77%)
 Frame = +1

Query: 1   YFQMEEEFVVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAK 180
           +FQM EE V PD++T+PRVLKAC GL  ++VGE VHR ++R+G G + FVLNALVDMYAK
Sbjct: 144 FFQMVEEGVEPDQYTFPRVLKACGGLKMIQVGEEVHRQVIRSGCGNNTFVLNALVDMYAK 203

Query: 181 CGDIVKARLIFDKIGDRDSVSWNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTV 360
           CGDI++A+ +FD I +++ VSWNSM+ GY RHGL++EAL + + M+K+G+EPDS+ +S+V
Sbjct: 204 CGDIIRAKRVFDSIQEKELVSWNSMIIGYIRHGLIIEALLILKCMMKEGYEPDSVTLSSV 263

Query: 361 LSRFSAVSKVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVS 540
           L+      K+G ++H W+LRRGLE NLS+ANSLI+  S Q  +  ARWLF+ + +RDVVS
Sbjct: 264 LTSMPP-EKIGTQIHAWILRRGLEWNLSVANSLIVFYSNQNSIDKARWLFECMRERDVVS 322

Query: 541 WNSIISAHQKDPKALVYFQLMEESDTWPNAITFVSLLSACAHLGLVEDGQRLFVKMKEKY 720
           WNSIISAH KD  AL YF  M  SD  P+ ITFVS+LSACA+L +V DG+R+F  M ++Y
Sbjct: 323 WNSIISAHSKDSIALDYFNDMVNSDITPDVITFVSVLSACANLEMVSDGERIFSMMVDRY 382

Query: 721 RIRPRMEHYACMVNLLGRAGLINEAY 798
            + P MEHYACMVNL GRAGL++EAY
Sbjct: 383 EMSPCMEHYACMVNLYGRAGLVDEAY 408



 Score =  100 bits (249), Expect = 6e-19
 Identities = 64/218 (29%), Positives = 116/218 (53%), Gaps = 7/218 (3%)
 Frame = +1

Query: 25  VVPDKFTYPRVLKACAGLGSVRVGEAVHRDLVRAGFGTDGFVLNALVDMYAKCGDIVKAR 204
           ++ D   +  +L+ C  L ++  G  V   +       +  + + L+ +YA  G + KA 
Sbjct: 49  LIDDPQIFASLLETCFQLKAIDFGMKVRELIPERLLRRNAGISSKLLRLYACSGQLEKAH 108

Query: 205 LIFDKIGDRDSVS--WNSMLTGYGRHGLLVEALDMFRGMIKDGFEPDSIAVSTVLSRFSA 378
            +FDK+  R+S +  WNS+++GY   GL  +AL +F  M+++G EPD      VL     
Sbjct: 109 EMFDKMPHRNSSAFPWNSLISGYTEKGLYEDALALFFQMVEEGVEPDQYTFPRVLKACGG 168

Query: 379 VS--KVGFEVHGWVLRRGLEQNLSIANSLILVCSAQGKLYCARWLFDRISQRDVVSWNSI 552
           +   +VG EVH  V+R G   N  + N+L+ + +  G +  A+ +FD I ++++VSWNS+
Sbjct: 169 LKMIQVGEEVHRQVIRSGCGNNTFVLNALVDMYAKCGDIIRAKRVFDSIQEKELVSWNSM 228

Query: 553 ISA---HQKDPKALVYFQLMEESDTWPNAITFVSLLSA 657
           I     H    +AL+  + M +    P+++T  S+L++
Sbjct: 229 IIGYIRHGLIIEALLILKCMMKEGYEPDSVTLSSVLTS 266