BLASTX nr result
ID: Cocculus23_contig00024713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024713
(1486 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 721 0.0
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 716 0.0
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 701 0.0
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam... 679 0.0
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 674 0.0
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 670 0.0
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 639 e-180
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 639 e-180
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 637 e-180
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 636 e-180
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 631 e-178
ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prun... 631 e-178
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 631 e-178
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 627 e-177
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 627 e-177
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 626 e-177
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 618 e-174
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 605 e-170
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi... 590 e-166
ref|XP_007144014.1| hypothetical protein PHAVU_007G121900g [Phas... 588 e-165
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 721 bits (1862), Expect = 0.0
Identities = 350/495 (70%), Positives = 412/495 (83%), Gaps = 1/495 (0%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTTKPSKRSHQNLIANCRNPNSKDP-NPTSQPKLKIFAESRATHLQ 1307
I+S DF PHC PFS KP+ SH I CRNPN D N + PK+ + AE+R HLQ
Sbjct: 13 IYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPAHLQ 72
Query: 1306 SLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKA 1127
S DF++THL+KL RSCKAGK++ESLYFLE LVNKGYTPDV+LCTKLIKGFFN +N+ KA
Sbjct: 73 SYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA 132
Query: 1126 VRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSL 947
RVMEILESH +PD FAYNA++SGFCKVNQI AT+VL+RM+++G PD+V+YNI+IGSL
Sbjct: 133 SRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSL 192
Query: 946 CNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRP 767
CNR KLGLAL + DQLL D+C PTVITYTILIEATIVEGG INEAMKLL+EML++GL P
Sbjct: 193 CNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG--INEAMKLLEEMLARGLLP 250
Query: 766 DMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLL 587
DMYTYNAI RG+CKEGMV+ A E + SL S+GCEPDVISYN+LLRA LN+G+W EGE+L+
Sbjct: 251 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310
Query: 586 AEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKE 407
AEM + GCEPN VTY ILI+ LC G++++AI VLKVM+E+ L PD+YSYDP ISA CKE
Sbjct: 311 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 406 GRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSY 227
GRLDLAI +DYMISNGC PDIVNYN+IL+ALCKNGNA+QALE+F KL GCPPNVSSY
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 226 NTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDMEN 47
NTMIS LW+ +R +ALGMV M++KGIDPDEITYNSLISCLCRDGLV+EA+GLL DME
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490
Query: 46 CGLKLTVITYNIVLL 2
G + TVI+YNIVLL
Sbjct: 491 SGFRPTVISYNIVLL 505
Score = 227 bits (578), Expect = 1e-56
Identities = 119/373 (31%), Positives = 207/373 (55%), Gaps = 1/373 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGK-PDS 1082
C K +L L+ L+ P V+ T LI+ +++A++++E + + G PD
Sbjct: 193 CNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM 252
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
+ YNA++ G CK + A +++ + S+GC PDV+SYNIL+ + N+GK K+ +
Sbjct: 253 YTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAE 312
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ CEP +TY+ILI + G I+EA+ +L M+ K L PD Y+Y+ + LCKE
Sbjct: 313 MFSRGCEPNKVTYSILISSLCRFGR--IDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AI + + S GC PD+++YN +L AL G ++ + ++ GC PNV +Y
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+I+ L G A+ ++ M+ +G+ PD +Y+ IS C++G ++ AI LD M
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
+G P +++YN +L LCK A+ +F ++ GC PN ++Y +I G+ + R +
Sbjct: 491 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTE 550
Query: 181 ALGMVLDMVNKGI 143
A+ + + ++ +
Sbjct: 551 AMELANSLFSRDV 563
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 716 bits (1847), Expect = 0.0
Identities = 346/495 (69%), Positives = 412/495 (83%), Gaps = 1/495 (0%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTTKPSKRSHQNLIANCRNPNSKDP-NPTSQPKLKIFAESRATHLQ 1307
I+S DF P C PF+ KP+ SH I CRNPN D N + PK+ + AE+R HLQ
Sbjct: 3 IYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHLQ 62
Query: 1306 SLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKA 1127
S DF++THL+KL RSCKAGK++ESLYFLE LVNKGYTPDV+LCTKLIKGFFN +N+ KA
Sbjct: 63 SYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 1126 VRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSL 947
RVMEILESH +PD FAYNA++SGFCKVN+I AT+VL+RM+++G PD+V+YNI+IGSL
Sbjct: 123 SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182
Query: 946 CNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRP 767
CNR KLGLALK+ DQLL D+C PTVITYTILIEATIVEGG INEAMKLL+EML++GL P
Sbjct: 183 CNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG--INEAMKLLEEMLARGLLP 240
Query: 766 DMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLL 587
DMYTYNAI RG+CKEGMV+ A E + SL S+GC+PDVISYN+LLRA LN+G+W EGE+L+
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 586 AEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKE 407
AEM + GCEPN VTY ILI+ LC G++++AI VLKVM+E+ L PD+YSYDP ISA CKE
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 406 GRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSY 227
GRLDLAI +DYMISNGC PDIVNYN+IL+ALCKNGNA+QALE+F KL GCPPNVSSY
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 226 NTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDMEN 47
NTMIS LW+ +R +ALGMV M++KG+DPDEITYNSLISCLCRDGLV+EA+GLL DME
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480
Query: 46 CGLKLTVITYNIVLL 2
G + TVI+YNIVLL
Sbjct: 481 SGFRPTVISYNIVLL 495
Score = 226 bits (577), Expect = 2e-56
Identities = 119/373 (31%), Positives = 207/373 (55%), Gaps = 1/373 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGK-PDS 1082
C K +L L+ L+ P V+ T LI+ +++A++++E + + G PD
Sbjct: 183 CNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM 242
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
+ YNA++ G CK + A +++ + S+GC PDV+SYNIL+ + N+GK K+ +
Sbjct: 243 YTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAE 302
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ CEP +TY+ILI + G I+EA+ +L M+ K L PD Y+Y+ + LCKE
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGR--IDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AI + + S GC PD+++YN +L AL G ++ + ++ GC PNV +Y
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+I+ L G A+ ++ M+ +G+ PD +Y+ IS C++G ++ AI LD M
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
+G P +++YN +L LCK A+ +F ++ GC PN ++Y +I G+ + R +
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTE 540
Query: 181 ALGMVLDMVNKGI 143
A+ + + ++ +
Sbjct: 541 AMELANSLFSRDV 553
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 701 bits (1810), Expect = 0.0
Identities = 339/503 (67%), Positives = 412/503 (81%), Gaps = 8/503 (1%)
Frame = -1
Query: 1486 AIFSADFLPHCIPFSTTTKPSKRSHQNLIANCR--------NPNSKDPNPTSQPKLKIFA 1331
AI S + LPH ++ KP+ SH +CR N + NPT ++ + A
Sbjct: 2 AIVSTELLPHSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPT---RVSVSA 58
Query: 1330 ESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFF 1151
E ++T LQ+ DFKDTHL+K+ RSCKAG+Y+E++YFLEL+VNKGY PDV+LCTKLIKGFF
Sbjct: 59 EPKSTQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKGFF 118
Query: 1150 NSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVS 971
NSRN+ KA+RVM+ILE +G+PD FAYNA++SGFCK N+I A KVLDRM+SQG PDVV+
Sbjct: 119 NSRNIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVT 178
Query: 970 YNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDE 791
YNI+IGSLC+RGKLGLAL++ D+L++D+C+PTVITYTILIEA I++GG INEAMKLLDE
Sbjct: 179 YNIMIGSLCSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGG--INEAMKLLDE 236
Query: 790 MLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGR 611
MLS+GL+PDMYTYNAI RG+C+EGM+D A EFVK ++GC P+VISYN+LLRALLNRG+
Sbjct: 237 MLSRGLKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGK 296
Query: 610 WSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDP 431
W EGE L+A M A GCEPNVVTY ILI+ LC DGKVED ++VLK+M E+GL PD+YSYDP
Sbjct: 297 WEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDP 356
Query: 430 FISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTG 251
IS FCKEGRLDLAI LD MIS+GC PDIVNYN++L+ALCKNG+A QALE+FE LG G
Sbjct: 357 LISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVG 416
Query: 250 CPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAM 71
CPPNVSSYNTM S LWN +R++ALGMV DMV+KGI+PDEITYNSLISCLCRDG+V+EA+
Sbjct: 417 CPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAI 476
Query: 70 GLLRDMENCGLKLTVITYNIVLL 2
GLL DME G + TVITYNIVLL
Sbjct: 477 GLLVDMEAGGFQPTVITYNIVLL 499
>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 586
Score = 679 bits (1753), Expect = 0.0
Identities = 329/499 (65%), Positives = 413/499 (82%), Gaps = 5/499 (1%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTT-KPSKRSHQN--LIANCRNPNSKDPNPTSQ--PKLKIFAESRA 1319
+FS + + H +PF+T KP+ SH + + +C N S+D + S+ K+++ AE+R
Sbjct: 3 LFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETRP 62
Query: 1318 THLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRN 1139
THL S DFK+THL+KL RSCKAGKY+E+ YFLE +V KGY PDVVLCTK+IKGFFN RN
Sbjct: 63 THLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRN 122
Query: 1138 VSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNIL 959
V KA RV+EILE +G+PD FAYNA++SGFCK+N++ FA KVLDRMRS+G SPDVV+YNI+
Sbjct: 123 VEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIM 182
Query: 958 IGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSK 779
IGS C+RGKL A K+ +QLL+D+C+P+VITYTILIEAT+++G INEAMKLLDEMLSK
Sbjct: 183 IGSFCSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGE--INEAMKLLDEMLSK 240
Query: 778 GLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEG 599
GLRPDM+TYNAI RG+CK+GMV+ A +FV+SL +RGC+PDVISYN+LLR LLN+G+W+EG
Sbjct: 241 GLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEG 300
Query: 598 ERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISA 419
E+L+ EM++ GCEPNVVTY ILI+ LC +GK+E+A++VLK+M E GL PD+YSYDP ISA
Sbjct: 301 EKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISA 360
Query: 418 FCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPN 239
FCKEGRLDLAI FLD MIS+GC PDIVNYN++L+ LCKNG A QALE+FEKL GCPPN
Sbjct: 361 FCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPN 420
Query: 238 VSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLR 59
VSSYNTM S LW+S +++KAL M+ +M++K I PDEITYNSLISCLCRDG+VDEA+ LL
Sbjct: 421 VSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLV 480
Query: 58 DMENCGLKLTVITYNIVLL 2
DM G+ TVI+YNIVLL
Sbjct: 481 DMGCSGIPPTVISYNIVLL 499
Score = 194 bits (493), Expect = 9e-47
Identities = 115/368 (31%), Positives = 186/368 (50%), Gaps = 36/368 (9%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK D + + L+ P V+ T LI+ +++A+++++ + S G +PD
Sbjct: 187 CSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDM 246
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F YNA++ G CK + A K + ++++GC PDV+SYNIL+ L N+GK K+ +
Sbjct: 247 FTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTE 306
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
++ CEP V+TY+ILI + EG + EA+ +L M +GL PD Y+Y+ + CKE
Sbjct: 307 MVSRGCEPNVVTYSILISSLCREGK--LEEAVNVLKMMKERGLTPDAYSYDPLISAFCKE 364
Query: 721 GMVDEAIEFVKSLPSRGCEPD-----------------------------------VISY 647
G +D AIEF+ + S GC PD V SY
Sbjct: 365 GRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSY 424
Query: 646 NVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMME 467
N + AL + G + +++EM++ P+ +TY LI+ LC DG V++AI++L M
Sbjct: 425 NTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGC 484
Query: 466 EGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQ 287
G+ P SY+ + CK R++ AI L M+ C P+ Y ++ + G +
Sbjct: 485 SGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSE 544
Query: 286 ALEVFEKL 263
A+E+ L
Sbjct: 545 AMELANAL 552
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 674 bits (1738), Expect = 0.0
Identities = 320/501 (63%), Positives = 413/501 (82%), Gaps = 6/501 (1%)
Frame = -1
Query: 1486 AIFSADFLPHCIPFSTTTKPSKRSHQNLIANCRNPNSKDPN----PTSQP-KLKIFAESR 1322
AI S +FLP +PFS K + +CRNP+ + +P ++++ E++
Sbjct: 2 AIISTEFLPQTLPFSPQPKQHTSRQSHTCLSCRNPSQSSTDIYRKKNKKPLRVRVSVETK 61
Query: 1321 ATHLQS-LDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNS 1145
+ + QS DF ++HLLK+ RSCK+GKY+E+LYFLEL+V+KG+ PDV+LCTK+++GFFNS
Sbjct: 62 SPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNS 121
Query: 1144 RNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYN 965
RN+ KA+RVMEILE HG+PD F+YNAM+SGFCK N++ A KVLDRMR QG SPD ++YN
Sbjct: 122 RNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYN 181
Query: 964 ILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEML 785
I+IGSLC+RGK+ +A K+ D+LL+D+C+P+VITYTILIEATI EGG +++AM++L+EML
Sbjct: 182 IMIGSLCSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGG--VDKAMEVLEEML 239
Query: 784 SKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWS 605
S+GL PDM+TYNAI RG+C+EGM+D A EFV+SL ++GC P+VISYN+LLRALLNRG+WS
Sbjct: 240 SRGLLPDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWS 299
Query: 604 EGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFI 425
+GE++L++M++ GCEPNVVTY ILI+ LC DGKVEDA++VLK M E+G+ PD+YSYDP I
Sbjct: 300 DGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLI 359
Query: 424 SAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCP 245
SAFCKEGRLDLAI F+DYMIS+G PDIVNYN+IL+ALCKNGNA ALE+FEKLG GCP
Sbjct: 360 SAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCP 419
Query: 244 PNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGL 65
P VSSYNTM S LWN ER+KAL M+ +MV+K I+PDEITYNSLISCLCR+G+V+EA+GL
Sbjct: 420 PTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGL 479
Query: 64 LRDMENCGLKLTVITYNIVLL 2
L DME G KL+VI+YNIVLL
Sbjct: 480 LIDMEAGGFKLSVISYNIVLL 500
Score = 160 bits (405), Expect = 1e-36
Identities = 91/271 (33%), Positives = 155/271 (57%), Gaps = 2/271 (0%)
Frame = -1
Query: 1249 GKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDSFAY 1073
GK+ + L +V++G P+VV + LI V AV V++ ++ G PD+++Y
Sbjct: 296 GKWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSY 355
Query: 1072 NAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQ 893
+ ++S FCK ++ A + +D M S G PD+V+YN ++ +LC G AL++F++L +
Sbjct: 356 DPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGE 415
Query: 892 DDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMV 713
C PTV +Y + A + G I +A++++ EM+SK + PD TYN++ LC+EGMV
Sbjct: 416 VGCPPTVSSYNTMFSA-LWNCGERI-KALEMISEMVSKRINPDEITYNSLISCLCREGMV 473
Query: 712 DEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGIL 533
+EAI + + + G + VISYN++L L R + LLA M+ GC PN TY +L
Sbjct: 474 NEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLL 533
Query: 532 INLLCHDGKVEDAIDVLKVMME-EGLAPDSY 443
I + G +A+ + ++ + E ++ S+
Sbjct: 534 IEGIGFAGWRVEAMGLANLLFDIEAISEHSF 564
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 670 bits (1729), Expect = 0.0
Identities = 321/496 (64%), Positives = 406/496 (81%), Gaps = 2/496 (0%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTT-KPSKRSHQNLIANCRNPNSKDPNPTSQP-KLKIFAESRATHL 1310
+FS +FLPH I F+T KP+ S + I +C P D N P K+++ AE+R TH+
Sbjct: 3 LFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHV 62
Query: 1309 QSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSK 1130
S DFK+ HL+KL RSC+AGKY+ESLYFLE +V+KGYTPDV+LCTKLIKGFFNSRN+ K
Sbjct: 63 LSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGK 122
Query: 1129 AVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGS 950
A RVMEILE +GKPD FAYNA++SGF K NQ+ A +VLDRM+S+G PDVV+YNI+IGS
Sbjct: 123 ATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182
Query: 949 LCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLR 770
C+RGKL LAL++F++LL+D+CEPTVITYTILIEATI++GG I+ AMKLLDEMLSKGL
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG--IDVAMKLLDEMLSKGLE 240
Query: 769 PDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERL 590
PD TYNAI RG+CKE MVD+A E ++SL SRGC+PD+I+YN+LLR LL+RG+WSEGE+L
Sbjct: 241 PDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKL 300
Query: 589 LAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCK 410
++EMI+ GC+PNVVT+ ILI LC DGKVE+A+++L+ M E+GL PD+Y YDP I+ FC+
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCR 360
Query: 409 EGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSS 230
EGRLDLA FL+YMIS+GC PDIVNYN+I++ LC+ G A QALEVFEKL GCPPNVSS
Sbjct: 361 EGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSS 420
Query: 229 YNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDME 50
YNT+ S LW+S +R +AL M+L ++N+GIDPDEITYNSLISCLCRDG+VDEA+ LL DM+
Sbjct: 421 YNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ 480
Query: 49 NCGLKLTVITYNIVLL 2
+ + V++YNI+LL
Sbjct: 481 SGRYRPNVVSYNIILL 496
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 639 bits (1648), Expect = e-180
Identities = 316/500 (63%), Positives = 399/500 (79%), Gaps = 6/500 (1%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTT----KPS-KRSHQNLIANCRNPNSKDPNPTSQPKLKIFAESRA 1319
I S DF+P + T+ KP+ S Q+ + +C NP S + + ++ AE+R
Sbjct: 4 ISSTDFVPRNLVIFTSQHQQLKPTTSHSVQSTVVSCINPKSNE-----RVRVSSSAETRP 58
Query: 1318 -THLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSR 1142
THL S D K+T +KL ++S +AGK+DESLYF+E +V G PDVV+CTKLIK FF R
Sbjct: 59 NTHLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 118
Query: 1141 NVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNI 962
+KAVRVMEILE +G+PD FAYNA++SGFCK NQI A KVLDR+RS+G SPDVV+YNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 961 LIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLS 782
+IGSLC+RG + A K+FDQLL+D+C+PTVITYTILI+AT++EG ++AMKLLDEML+
Sbjct: 179 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT--DKAMKLLDEMLA 236
Query: 781 KGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSE 602
+GL PDM+T NAI RG+CK+GMV +A +FV+SL SRGC+PDVISYN+LLR LLN G+W E
Sbjct: 237 RGLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 296
Query: 601 GERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFIS 422
GE+L+ EMI+ G EPNVVTY ILI+ LC DGK EDA+DVL+ E+GL PD+YSYDP IS
Sbjct: 297 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 356
Query: 421 AFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPP 242
A+CK+GRLDLAI FLDYMIS+GC PDIVNYN+IL+A CKNGNA QALE+FEKL GCPP
Sbjct: 357 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 416
Query: 241 NVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLL 62
NVSSYNTM S LW+S ++++ALGM+ +M++KGI+PDEITYNSLISCLCRDG+VDEA+GLL
Sbjct: 417 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 476
Query: 61 RDMENCGLKLTVITYNIVLL 2
DME+ + TVI+YNI++L
Sbjct: 477 VDMESTRFRPTVISYNIIIL 496
Score = 214 bits (545), Expect = 8e-53
Identities = 112/370 (30%), Positives = 195/370 (52%), Gaps = 1/370 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGK-PDS 1082
C G + + + L+ P V+ T LI+ KA+++++ + + G PD
Sbjct: 184 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDM 243
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F NA++ G CK + A + + + S+GC PDV+SYN+L+ +L N GK K+ +
Sbjct: 244 FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
++ EP V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK+
Sbjct: 304 MISRGLEPNVVTYSILISSLCRDGKT--EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 361
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF+ + S GC PD+++YN +L A G + + ++ GC PNV +Y
Sbjct: 362 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 421
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ M+ +G+ PD +Y+ IS C++G +D A+ L M S
Sbjct: 422 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 481
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +++YN I+ CK ++++EV + GC PN ++Y +I G+ R +
Sbjct: 482 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 541
Query: 181 ALGMVLDMVN 152
A+ + +V+
Sbjct: 542 AMELANALVS 551
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 639 bits (1647), Expect = e-180
Identities = 311/501 (62%), Positives = 401/501 (80%), Gaps = 7/501 (1%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTTKPSKRSHQNLIAN---CRNPNSKDPNPT--SQPKLK-IFAESR 1322
+FS +F+ H F T+K K S +L +N C NP D N + PKL+ + E++
Sbjct: 3 MFSTEFISHSCSFPFTSKHFKLSLHSLQSNVVSCINPTHNDTNSNLGNPPKLRRVLPETK 62
Query: 1321 ATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSR 1142
TH+ S DFK+THL+KL RSCKAGK +ESLYFLE +V KGY PDV++CTKLIKGFFNSR
Sbjct: 63 PTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSR 122
Query: 1141 NVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNI 962
N+ KA RVMEILE HG+PD FAYNA++SGFCK N+I A KVLDRM+ +G S DVV+YNI
Sbjct: 123 NIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNI 182
Query: 961 LIGSLCNRGKLGLALKMFDQLLQDD-CEPTVITYTILIEATIVEGGNGINEAMKLLDEML 785
+IG+ C++GK+ LALK+F++LL+D+ C+PT+ITYTILIEA I+EGG I+E +KLLDEML
Sbjct: 183 MIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGG--IDEGLKLLDEML 240
Query: 784 SKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWS 605
S+GL PD +TYN I RGL KEG V++A E V++L SRGC+PDVI+YN+LLRALL++G+W
Sbjct: 241 SRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWY 300
Query: 604 EGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFI 425
EGE+L+ EM + GCEPNVVTY ILI+ LC DGK+E++++++KVM E+GL PD+Y YDP I
Sbjct: 301 EGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 360
Query: 424 SAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCP 245
+AFC+EG+LD+AI FLDYMIS+G PDIVNYN+I++ALCKNGN+ A+E+F KL GCP
Sbjct: 361 AAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCP 420
Query: 244 PNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGL 65
PNVSSYNTM+S LW S +R +ALGM+ M++ GIDPD ITYNSLISCLCRDG+VDEA+GL
Sbjct: 421 PNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGL 480
Query: 64 LRDMENCGLKLTVITYNIVLL 2
L DM + + +++YNIVLL
Sbjct: 481 LADMLSGRFQPNIVSYNIVLL 501
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 637 bits (1642), Expect = e-180
Identities = 314/500 (62%), Positives = 397/500 (79%), Gaps = 6/500 (1%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTT----KPS-KRSHQNLIANCRNPNSKDPNPTSQPKLKIFAESRA 1319
I S DF+P + T+ KP+ S Q+ + +C NP S + + ++ AE+R
Sbjct: 4 ISSTDFVPRNLVIFTSQHQQQKPTTSHSVQSTVVSCINPKSNE-----RVRVSSSAETRP 58
Query: 1318 -THLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSR 1142
THL S D K+T +KL +RS +AGK+DESLYF+E +V G PDVV+CTKLIK FF R
Sbjct: 59 NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 118
Query: 1141 NVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNI 962
+KAVRVMEILE +G+PD FAYNA++SGFCK NQI A KVLDR+RS+G SPDVV+YNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 961 LIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLS 782
+IGSLC+RG + K+FDQLL+D+C+PTVITYTILI+AT++EG ++AMKLLDEM +
Sbjct: 179 MIGSLCSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQT--DKAMKLLDEMFA 236
Query: 781 KGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSE 602
+GL PDM+T NAI RG+CK+GMV +A +FV+SL SRGC+PDVISYN+LLR LLN G+W E
Sbjct: 237 RGLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 296
Query: 601 GERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFIS 422
GE+L+ EMI+ G EPNVVTY ILI+ LC DGK EDA+DVL+ E+GL PD+YSYDP IS
Sbjct: 297 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 356
Query: 421 AFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPP 242
A+CK+GRLDLAI FLDYMIS+GC PDIVNYN+IL+A CKNGNA QALE+FEKL GCPP
Sbjct: 357 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 416
Query: 241 NVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLL 62
NVSSYNTM S LW+S ++++ALGM+ +M++KGI+PDEITYNSLISCLCRDG+VDEA+GLL
Sbjct: 417 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 476
Query: 61 RDMENCGLKLTVITYNIVLL 2
DME+ + TV++YNI++L
Sbjct: 477 VDMESTRFRPTVVSYNIIIL 496
Score = 215 bits (548), Expect = 4e-53
Identities = 114/370 (30%), Positives = 194/370 (52%), Gaps = 1/370 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGK-PDS 1082
C G + + L+ P V+ T LI+ KA+++++ + + G PD
Sbjct: 184 CSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDM 243
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F NA++ G CK + A + + + S+GC PDV+SYN+L+ +L N GK K+ +
Sbjct: 244 FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
++ EP V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK+
Sbjct: 304 MISRGLEPNVVTYSILISSLCRDGKT--EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 361
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF+ + S GC PD+++YN +L A G + + ++ GC PNV +Y
Sbjct: 362 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 421
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ M+ +G+ PD +Y+ IS C++G +D A+ L M S
Sbjct: 422 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 481
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +V+YN I+ CK ++A+EV + GC PN ++Y +I G+ R +
Sbjct: 482 TRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 541
Query: 181 ALGMVLDMVN 152
A+ + +V+
Sbjct: 542 AMELANALVS 551
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 636 bits (1640), Expect = e-180
Identities = 316/519 (60%), Positives = 397/519 (76%), Gaps = 26/519 (5%)
Frame = -1
Query: 1480 FSADFLPHCIPF-STTTKPSKRSHQNLIANCRNPNSKDPNPTSQPK---LKIFAESRA-- 1319
FS+D + IPF S T K + S L+ N +S S P +K F+ S A
Sbjct: 4 FSSDLVGFTIPFYSKTQKHNSNSSHGLLLLSHNRSSLLSFSNSNPNHDNVKSFSSSGAAR 63
Query: 1318 --------------------THLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKG 1199
TH SL F+DT +LK+F RSC++G Y ESL+ LE +V KG
Sbjct: 64 NLQAATTQDATVPTERRQHQTHSHSLGFRDTQMLKIFHRSCRSGNYIESLHLLESMVRKG 123
Query: 1198 YTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATK 1019
Y PDV+LCTKLIKGFF RN+ KAVRVMEILE G+PD FAYNA+++GFCK+N+I AT+
Sbjct: 124 YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATR 183
Query: 1018 VLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATI 839
VLDRMRS+G SPD V+YNI+IGSLC+RGKL LALK+ DQLL D+C+PTVITYTILIEAT+
Sbjct: 184 VLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATM 243
Query: 838 VEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPD 659
+EGG ++EA+KLLDEMLS+GL+PDM+TYN I RG+CKEGMVD A E V++L RGCEPD
Sbjct: 244 LEGG--VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPD 301
Query: 658 VISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLK 479
VISYN+LLRALLN+G+W EGE+L+ +M + C+PNVVTY ILI LC DGK+E+A+++LK
Sbjct: 302 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLK 361
Query: 478 VMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNG 299
+M E+GL+PD+YSYDP I+AFC+EGRLDLAI FL+ MIS+GC PDIVNYN++L+ LCKNG
Sbjct: 362 LMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNG 421
Query: 298 NAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYN 119
A QALE+F KLG GC PN SSYNTM S LW+S ++++AL M+ +MV++GIDPDEITYN
Sbjct: 422 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYN 481
Query: 118 SLISCLCRDGLVDEAMGLLRDMENCGLKLTVITYNIVLL 2
S+ISCLCR+G+VDEA LL DM +C +V+TYNIVLL
Sbjct: 482 SMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLL 520
Score = 237 bits (605), Expect = 9e-60
Identities = 125/369 (33%), Positives = 203/369 (55%), Gaps = 1/369 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK +L L+ L++ P V+ T LI+ V +A+++++ + S G KPD
Sbjct: 208 CSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 267
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F YN ++ G CK + A +++ + +GC PDV+SYNIL+ +L N+GK K+ +
Sbjct: 268 FTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTK 327
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ + C+P V+TY+ILI +G I EA+ LL M KGL PD Y+Y+ + C+E
Sbjct: 328 MFSEKCDPNVVTYSILITTLCRDGK--IEEALNLLKLMKEKGLSPDAYSYDPLIAAFCRE 385
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF++++ S GC PD+++YN +L L G+ + + ++ GC PN +Y
Sbjct: 386 GRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 445
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ M+ +G+ PD +Y+ IS C+EG +D A L M S
Sbjct: 446 NTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRS 505
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +V YN +L CK A++V E + GC PN S+Y +I G+ + R +
Sbjct: 506 CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAE 565
Query: 181 ALGMVLDMV 155
A+ + D+V
Sbjct: 566 AMELANDLV 574
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 631 bits (1628), Expect = e-178
Identities = 311/514 (60%), Positives = 399/514 (77%), Gaps = 22/514 (4%)
Frame = -1
Query: 1477 SADFLPHCIPF-STTTKP-SKRSHQNLIANCR---------NPNS-----------KDPN 1364
S++ + IPF S T KP S SH L+++ R NPN+ ++
Sbjct: 5 SSELVGFTIPFYSKTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQ 64
Query: 1363 PTSQPKLKIFAESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDV 1184
T+ + E R H QSL F+DT +LK+F RSC++G Y ESL+ LE +V KGY PDV
Sbjct: 65 TTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV 124
Query: 1183 VLCTKLIKGFFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRM 1004
+LCTKLIKGFF RN+ KAVRVMEILE G+PD FAYNA+++GFCK+N+I AT+VLDRM
Sbjct: 125 ILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRM 184
Query: 1003 RSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGN 824
RS+ SPD V+YNI+IGSLC+RGKL LALK+ +QLL D+C+PTVITYTILIEAT++EGG
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG- 243
Query: 823 GINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYN 644
++EA+KL+DEMLS+GL+PDM+TYN I RG+CKEGMVD A E V++L +GCEPDVISYN
Sbjct: 244 -VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 643 VLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEE 464
+LLRALLN+G+W EGE+L+ +M + C+PNVVTY ILI LC DGK+E+A+++LK+M E+
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 463 GLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQA 284
GL PD+YSYDP I+AFC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QA
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 283 LEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISC 104
LE+F KLG GC PN SSYNTM S LW+S ++++AL M+L+M++ GIDPDEITYNS+ISC
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 103 LCRDGLVDEAMGLLRDMENCGLKLTVITYNIVLL 2
LCR+G+VDEA LL DM +C +V+TYNIVLL
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Score = 241 bits (615), Expect = 6e-61
Identities = 128/369 (34%), Positives = 201/369 (54%), Gaps = 1/369 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK D +L L L++ P V+ T LI+ V +A+++M+ + S G KPD
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F YN ++ G CK + A +++ + +GC PDV+SYNIL+ +L N+GK K+ +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ + C+P V+TY+ILI +G I EAM LL M KGL PD Y+Y+ + C+E
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGK--IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF++++ S GC PD+++YN +L L G+ + + ++ GC PN +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ MM G+ PD +Y+ IS C+EG +D A L M S
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +V YN +L CK A+ V E + GC PN ++Y +I G+ + R +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 181 ALGMVLDMV 155
A+ + D+V
Sbjct: 562 AMELANDLV 570
>ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
gi|462400760|gb|EMJ06317.1| hypothetical protein
PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 631 bits (1627), Expect = e-178
Identities = 298/404 (73%), Positives = 356/404 (88%)
Frame = -1
Query: 1213 LVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQI 1034
+VNKGY PDV+LCTKLIKGFFNSRN+ KA+RVM+ILE +G+PD F+YNA++SGFCK N+I
Sbjct: 1 MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANRI 60
Query: 1033 RFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTIL 854
A KVLDRMRSQG SPDVV+YNI+IGSLC+RGKLGLALK+ DQL++D+C PTVITYTIL
Sbjct: 61 ESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTIL 120
Query: 853 IEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSR 674
IEATIV+GG I+EAMKLLDEMLS+GL+PDMYTYNA+ RG+C+EGM+D A +FV+SL S+
Sbjct: 121 IEATIVDGG--IDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSK 178
Query: 673 GCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDA 494
GC P+VISYN+LLRALLNRG+W EGE+L+ M + GCEPNVVTY ILI+ LC DGKVEDA
Sbjct: 179 GCPPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDA 238
Query: 493 IDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSA 314
++VLK+M ++GL PD+YSYDP +SAFCKEGRLDLAI FLDYMIS+GC PDIVNYN+IL+A
Sbjct: 239 VNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 298
Query: 313 LCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPD 134
LCK+G A QAL++FE LG GCPPNVSSYNTM S LWN +R++ALGMV +MV KGI PD
Sbjct: 299 LCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPD 358
Query: 133 EITYNSLISCLCRDGLVDEAMGLLRDMENCGLKLTVITYNIVLL 2
EITYNSLISCLCRDG+VDEA+GLL DME G + TVI+YNI+LL
Sbjct: 359 EITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILL 402
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 631 bits (1627), Expect = e-178
Identities = 311/511 (60%), Positives = 399/511 (78%), Gaps = 18/511 (3%)
Frame = -1
Query: 1480 FSADFLPHCIPFSTTTKP--SKRSH-----QNLI----ANCRNPNSKDPNPTSQPKLK-- 1340
FS++ + IPF + T+ S SH ++L+ +N + N K + + L+
Sbjct: 4 FSSELVGFTIPFYSKTQKHYSNSSHGLSHNRSLLTFSNSNPNHDNGKSFSSSGARNLQAT 63
Query: 1339 -----IFAESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLC 1175
I E R H QSL F+DT +LK+F RSC++G Y ESL+ LE +V KGY PDV+LC
Sbjct: 64 TTDAAIPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILC 123
Query: 1174 TKLIKGFFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQ 995
TKLIKGFF RNV KAVRVMEILE G+PD FAYNA+++GFCK+N+I AT+VLDRMRS+
Sbjct: 124 TKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 183
Query: 994 GCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGIN 815
SPD V+YNI+IGSLC+RGKL LALK+ DQLL D+C+PTVITYTILIEAT++EGG ++
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGG--VD 241
Query: 814 EAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLL 635
EA+KLLDEMLS+GL+PDM+TYN I RG+CKEGMVD A E +++L +GCEPDVISYN+LL
Sbjct: 242 EALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301
Query: 634 RALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLA 455
RALLN+G+W EGE+L+ +M + C+PNVVTY ILI LC DGK+E+A+++LK+M E+GL
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 361
Query: 454 PDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEV 275
PD+YSYDP I+AFC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QALE+
Sbjct: 362 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Query: 274 FEKLGTTGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCR 95
F KLG GC PN SSYNTM S LW+S ++++AL M+L+MV+ GIDPDEITYNS+ISCLCR
Sbjct: 422 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCR 481
Query: 94 DGLVDEAMGLLRDMENCGLKLTVITYNIVLL 2
+G+VD+A LL DM +C +V+TYNIVLL
Sbjct: 482 EGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512
Score = 239 bits (611), Expect = 2e-60
Identities = 125/369 (33%), Positives = 203/369 (55%), Gaps = 1/369 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK D +L L+ L++ P V+ T LI+ V +A+++++ + S G KPD
Sbjct: 200 CSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 259
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F YN ++ G CK + A +++ + +GC PDV+SYNIL+ +L N+GK K+ +
Sbjct: 260 FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ + C+P V+TY+ILI +G I EAM LL M KGL PD Y+Y+ + C+E
Sbjct: 320 MFSEKCDPNVVTYSILITTLCRDGK--IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 377
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF++++ S GC PD+++YN +L L G+ + + ++ GC PN +Y
Sbjct: 378 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 437
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ M+ G+ PD +Y+ IS C+EG +D A L M S
Sbjct: 438 NTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +V YN +L CK A++V + + GC PN ++Y +I G+ + R +
Sbjct: 498 CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE 557
Query: 181 ALGMVLDMV 155
A+ + D+V
Sbjct: 558 AMELANDLV 566
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 627 bits (1618), Expect = e-177
Identities = 310/514 (60%), Positives = 398/514 (77%), Gaps = 22/514 (4%)
Frame = -1
Query: 1477 SADFLPHCIPF-STTTKP-SKRSHQNLIANCR---------NPNS-----------KDPN 1364
S++ + IPF S T KP S SH L+++ R NPN+ ++
Sbjct: 5 SSELVGFTIPFYSKTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQ 64
Query: 1363 PTSQPKLKIFAESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDV 1184
T+ + E R H QSL F+DT +LK+F RSC++G Y ESL+ LE +V KGY PDV
Sbjct: 65 TTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV 124
Query: 1183 VLCTKLIKGFFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRM 1004
+LCTKLIKGFF RN+ KAVRVMEILE G+PD FAYNA+++GFCK+N+I AT+VLDRM
Sbjct: 125 ILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRM 184
Query: 1003 RSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGN 824
RS+ SPD V+YNI+IGSLC+RGKL LALK+ +QLL D+C+PTVITYTILIEAT++EGG
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG- 243
Query: 823 GINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYN 644
++EA+KL+DEMLS+GL+PDM+TYN I RG+CKEGMVD A E V++L +G EPDVISYN
Sbjct: 244 -VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYN 302
Query: 643 VLLRALLNRGRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEE 464
+LLRALLN+G+W EGE+L+ +M + C+PNVVTY ILI LC DGK+E+A+++LK+M E+
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 463 GLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQA 284
GL PD+YSYDP I+AFC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QA
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 283 LEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISC 104
LE+F KLG GC PN SSYNTM S LW+S ++++AL M+L+M++ GIDPDEITYNS+ISC
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 103 LCRDGLVDEAMGLLRDMENCGLKLTVITYNIVLL 2
LCR+G+VDEA LL DM +C +V+TYNIVLL
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Score = 237 bits (605), Expect = 9e-60
Identities = 127/369 (34%), Positives = 200/369 (54%), Gaps = 1/369 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK D +L L L++ P V+ T LI+ V +A+++M+ + S G KPD
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
F YN ++ G CK + A +++ + +G PDV+SYNIL+ +L N+GK K+ +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+ + C+P V+TY+ILI +G I EAM LL M KGL PD Y+Y+ + C+E
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGK--IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G +D AIEF++++ S GC PD+++YN +L L G+ + + ++ GC PN +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ + L G A+ ++ MM G+ PD +Y+ IS C+EG +D A L M S
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +V YN +L CK A+ V E + GC PN ++Y +I G+ + R +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 181 ALGMVLDMV 155
A+ + D+V
Sbjct: 562 AMELANDLV 570
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 627 bits (1616), Expect = e-177
Identities = 311/497 (62%), Positives = 393/497 (79%), Gaps = 3/497 (0%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTT-TKPS-KRSHQNLIANCRNPNSKD-PNPTSQPKLKIFAESRATH 1313
+FS++FLP + F+ KP+ +S + I CR N N TS AE R H
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLRNVTSS------AEFRQPH 54
Query: 1312 LQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVS 1133
+LD +D HL+KL RSC+AGK++ESLYFLE +V+KG+ PDVVLCTKLIKGFFNSRN+
Sbjct: 55 FPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLK 114
Query: 1132 KAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIG 953
KA+RVMEILE++G PD ++YNAM+SGF K NQI A +V DRMRS+G SPDVV+YNI+IG
Sbjct: 115 KAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIG 174
Query: 952 SLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGL 773
SLC+RGKL LA ++ D+LL+D C+P+VITYTILIEATI+EG INEA++L DE++S+GL
Sbjct: 175 SLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR--INEALELFDELVSRGL 232
Query: 772 RPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGER 593
RPD+YTYNAI RG+CKEGM D A++FV+ L +RGC PDV+SYN+LLR+ LN+ RW +GER
Sbjct: 233 RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGER 292
Query: 592 LLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFC 413
L+ +M+ SGCEPNVVT+ ILI+ C +G+V +A++VL+VM E+GL PDSYSYDP ISAFC
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352
Query: 412 KEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVS 233
KEGRLDLAI +L+ M+S+GC PDIVNYN+IL+ LCK G A AL+VFEKL GCPP V
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412
Query: 232 SYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDM 53
+YNTM S LW+ ++KAL M+ +M+ KGIDPDEITYNSLISCLCRDGLVDEA+GLL DM
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Query: 52 ENCGLKLTVITYNIVLL 2
E + TVI++NIVLL
Sbjct: 473 EATRFQPTVISFNIVLL 489
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 626 bits (1615), Expect = e-177
Identities = 305/497 (61%), Positives = 395/497 (79%), Gaps = 3/497 (0%)
Frame = -1
Query: 1483 IFSADFLPHCIPFSTTTKP-SKRSHQNLIANCRNPNSKDPNPTSQPKLKIFAESRATHLQ 1307
I A+ P C FS KP S+ S N + C + ++ ++ L++ +
Sbjct: 4 IIPAEIFPQCPFFSNNLKPKSQSSKHNFVVRCSSSSNDQSKVKTRNPLRV-------KIS 56
Query: 1306 SLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKA 1127
S +++ TH +K+ SCK GKYDE+LY LE + GY PDV+LCTKLIKGF NS+N K
Sbjct: 57 SENYRPTHDMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKG 116
Query: 1126 VRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSL 947
V+VM+ILE G+PD FAYNA++SGFCK+N+I A KVL+RM+++G PD V+YNILIGSL
Sbjct: 117 VKVMQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSL 176
Query: 946 CNRGKLGLALKMFDQLLQDD-CEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLR 770
C+RGKLG ALK+ DQL +++ C+PTVITYTILIEATI+EGG I+EAMKLLDEMLS+GL+
Sbjct: 177 CDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGG--IHEAMKLLDEMLSRGLQ 234
Query: 769 PDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLN-RGRWSEGER 593
PDMYTYNAI RG+C+E M+D+A EFV+SLPS+GC+PDVISYN+LLRALL+ +G+WS+GE+
Sbjct: 235 PDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEK 294
Query: 592 LLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFC 413
L+ EM+++GCEPNVVTY IL++ LC DGK+++AI++LK+MM++GL PD+++YDP ISAFC
Sbjct: 295 LMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFC 354
Query: 412 KEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVS 233
K GRLDLAI FLDYMISNGC PDIVNYN+ILS +CK G A +A+EVFEKL GCPP+VS
Sbjct: 355 KGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVS 414
Query: 232 SYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDM 53
+YNT++S LWN+ R +AL MV +M+ KG+DPDEITYN+LISCLCRDG+V+EA+ LL DM
Sbjct: 415 TYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDM 474
Query: 52 ENCGLKLTVITYNIVLL 2
E G TVITYNI+LL
Sbjct: 475 EGNGFPPTVITYNILLL 491
Score = 228 bits (582), Expect = 4e-57
Identities = 123/373 (32%), Positives = 214/373 (57%), Gaps = 3/373 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYT-PDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPD 1085
C GK +L L+ L + P V+ T LI+ + +A+++++ + S G +PD
Sbjct: 177 CDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 236
Query: 1084 SFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCN-RGKLGLALKMF 908
+ YNA++ G C+ + A + + + S+GC PDV+SYNIL+ +L + +GK K+
Sbjct: 237 MYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLM 296
Query: 907 DQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLC 728
+++L CEP V+TY+IL+ A +G ++EA+ LL M+ KGL PD +TY+ + C
Sbjct: 297 NEMLSAGCEPNVVTYSILMSALCRDGK--LDEAINLLKIMMDKGLTPDTFTYDPLISAFC 354
Query: 727 KEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVV 548
K G +D AI+F+ + S GC PD+++YN +L + +G+ E + ++ GC P+V
Sbjct: 355 KGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVS 414
Query: 547 TYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYM 368
TY L++ L ++G A+ ++ M+E+G+ PD +Y+ IS C++G ++ A+ L M
Sbjct: 415 TYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDM 474
Query: 367 ISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRER 188
NG P ++ YN +L LCK +A+EV ++ G PN ++Y +I G+ S R
Sbjct: 475 EGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGRR 534
Query: 187 MKALGMVLDMVNK 149
++A+ M + +K
Sbjct: 535 VQAMEMASAIYHK 547
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 618 bits (1593), Expect = e-174
Identities = 308/493 (62%), Positives = 390/493 (79%), Gaps = 5/493 (1%)
Frame = -1
Query: 1465 LPHCIPF-STTTKP-SKRSHQNLIANCRNPNSKDP-NPTSQPKLKIFAESRATHLQSLDF 1295
LPH PF S KP S+ S N + C N + N + ++KI +E+R +H
Sbjct: 6 LPHQCPFFSNNLKPKSESSKHNFVVRCSISNEESRVNIRNPQRVKISSENRGSHD----- 60
Query: 1294 KDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVM 1115
+K+ SCK GKYDE+LY LE V GY PDV+LCTKLIKGFFNS+N K V+VM
Sbjct: 61 -----MKVLNWSCKVGKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVKVM 115
Query: 1114 EILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRG 935
+ILE G+PD FAYNA+VSGFCK+N+I A KVL+RM++ G PD V+YNILIGSLC+RG
Sbjct: 116 QILEQFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRG 175
Query: 934 KLGLALKMFDQLLQD-DCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMY 758
KLG AL + DQL ++ +C+PTVITYTILIEATI+EGG I+EAMKLLDEMLS GL+PDMY
Sbjct: 176 KLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGG--IHEAMKLLDEMLSIGLQPDMY 233
Query: 757 TYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLN-RGRWSEGERLLAE 581
TYNAI RG+C+E M+D+A EFV+SLPS+GC+PDVISYN+LLRALL+ RG+WS+GE+L+ E
Sbjct: 234 TYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNE 293
Query: 580 MIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGR 401
M+ +GCEPNVVTY IL++ LC DGK+++AI++LK+M+++GL PD+++YDP ISAFCK GR
Sbjct: 294 MLCAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGR 353
Query: 400 LDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNT 221
LD+AI FLDYMI+NGC PDIVNYN+ILS +CK G A +A+EVFEKL GCPP+VS+YNT
Sbjct: 354 LDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNT 413
Query: 220 MISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDMENCG 41
++S LWN+ R +AL MV +M+ KG+DPDEITYN+LISCLCRDG+V+EA+ LL DME G
Sbjct: 414 LMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNG 473
Query: 40 LKLTVITYNIVLL 2
TVITYNI+LL
Sbjct: 474 FPPTVITYNILLL 486
Score = 231 bits (590), Expect = 5e-58
Identities = 124/373 (33%), Positives = 215/373 (57%), Gaps = 3/373 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNK-GYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPD 1085
C GK +L L+ L + P V+ T LI+ + +A+++++ + S G +PD
Sbjct: 172 CDRGKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPD 231
Query: 1084 SFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCN-RGKLGLALKMF 908
+ YNA++ G C+ + A + + + S+GC PDV+SYNIL+ +L + RGK K+
Sbjct: 232 MYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLM 291
Query: 907 DQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLC 728
+++L CEP V+TY+IL+ A +G ++EA+ LL M+ KGL PD +TY+ + C
Sbjct: 292 NEMLCAGCEPNVVTYSILMSALCRDGK--LDEAINLLKIMVDKGLTPDTFTYDPLISAFC 349
Query: 727 KEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVV 548
K G +D AI+F+ + + GC PD+++YN +L + +G+ E + ++ GC P+V
Sbjct: 350 KGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVS 409
Query: 547 TYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYM 368
TY L++ L ++G A+ ++ M+E+G+ PD +Y+ IS C++G ++ A+ L M
Sbjct: 410 TYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDM 469
Query: 367 ISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRER 188
NG P ++ YN +L LCK +A+EV ++ GC PN ++Y +I G+ S R
Sbjct: 470 EGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGRR 529
Query: 187 MKALGMVLDMVNK 149
++A+ M + +K
Sbjct: 530 VQAMEMATAIYHK 542
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 605 bits (1560), Expect = e-170
Identities = 292/504 (57%), Positives = 375/504 (74%), Gaps = 11/504 (2%)
Frame = -1
Query: 1480 FSADFLPHCIPFSTTTKPSKRSHQNLIA----------NCRNPNSKDPNPTSQPKLKIFA 1331
FS +FL H + F T + + +I N N + N Q + ++
Sbjct: 4 FSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFRVNE 63
Query: 1330 ESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFF 1151
H Q DF+DT+ +K RSCK+ KYDESLYFL+ +VN+GY PDV+LCTKLIKGFF
Sbjct: 64 TKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFF 123
Query: 1150 NSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVS 971
N + + KA++VMEILE HGKPD FAYNA++SGFCK +++ A+KVLDRM+ +G PDVV+
Sbjct: 124 NMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVT 183
Query: 970 YNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDE 791
YNILIG+ C RG+L LAL++ DQLL+D+C+PTVITYTILIEATI +GG I+EAMKLLDE
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG--IDEAMKLLDE 241
Query: 790 MLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGR 611
MLS+GLRPD YTYN + G+CKEGM+D A EF+ + GC V +YN+LLR LLN G+
Sbjct: 242 MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301
Query: 610 WSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDP 431
W GE+L+++M+ GCEPN +TY LI LC DGK+++A +VLKVM E+ LAPD YSYDP
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 430 FISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTG 251
ISA C+EG++DLAI FLD MIS G PDI++YNSIL++LCKNGNA +AL +FEKLG G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 250 CPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAM 71
CPPN SYNT+ LW+S ++++ALGM+L+M++ GIDPDEITYNSLISCLCRDGLVD+A+
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAI 481
Query: 70 GLLRDM-ENCGLKLTVITYNIVLL 2
LL DM E+ + TVI+YN VLL
Sbjct: 482 ELLVDMFESEKCQPTVISYNTVLL 505
Score = 220 bits (560), Expect = 1e-54
Identities = 125/371 (33%), Positives = 194/371 (52%), Gaps = 2/371 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C G+ D +L ++ L+ P V+ T LI+ + +A+++++ + S G +PD
Sbjct: 192 CGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDR 251
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
+ YN +V+G CK + A + L R+ GC V +YNIL+ L N GK K+
Sbjct: 252 YTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSD 311
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
+L CEP ITY+ LI A +G I+EA +L M K L PD Y+Y+ + LC+E
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGK--IDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G VD AIEF+ + S G PD++SYN +L +L G E + ++ GC PN +Y
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSY 429
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFL-DYMI 365
L L G A+ ++ M+ G+ PD +Y+ IS C++G +D AI L D
Sbjct: 430 NTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489
Query: 364 SNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERM 185
S C P +++YN++L LCK A+EV + GC PN ++Y +I G+ + R
Sbjct: 490 SEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRY 549
Query: 184 KALGMVLDMVN 152
A+ + +VN
Sbjct: 550 DAMELANLLVN 560
>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 590 bits (1522), Expect = e-166
Identities = 290/505 (57%), Positives = 373/505 (73%), Gaps = 10/505 (1%)
Frame = -1
Query: 1486 AIFSADFLPHCIPFSTTTKPSKRSH-QNLIANCRNPNSKDPNPT---------SQPKLKI 1337
A S++FL HC+P T +K + + N + CR P + NP+ ++ ++
Sbjct: 2 ATVSSEFLSHCLPLGTNSKRAWLPNPSNTVITCRIPLLNEDNPSKRRLNNNNNNKGHTRV 61
Query: 1336 FAESRATHLQSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKG 1157
+ Q DF+DTH +K R CK GKY E+LYFLE +V +GY PDV+LCTKLIKG
Sbjct: 62 TSSDTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKG 121
Query: 1156 FFNSRNVSKAVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDV 977
F S+ KAVRVMEILE +G PDSFAYNA++SGFC+ ++ A +V+ RM+ +G SPDV
Sbjct: 122 LFTSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDV 181
Query: 976 VSYNILIGSLCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLL 797
V+YNILIGSLC RGKL LALK+ DQLL+D+C PTVITYTILIEATI+ G I++AM+LL
Sbjct: 182 VTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGS--IDDAMRLL 239
Query: 796 DEMLSKGLRPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNR 617
DEM+S+GL+PDMYTYN I RG+CK G+VD A EFV +L + P + YN+LL+ LLN
Sbjct: 240 DEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTT---PSLNLYNLLLKGLLNE 296
Query: 616 GRWSEGERLLAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSY 437
GRW GERL+++MI GCEPN+VTY +LI+ LC DGK +A+DVL+VM E+GL PD+Y Y
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356
Query: 436 DPFISAFCKEGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGT 257
DP ISAFCKEG++DLAI F+D MIS G PDIVNYN+I+ +LCK G A +AL +F+KL
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEE 416
Query: 256 TGCPPNVSSYNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDE 77
GCPPN SSYNTM LW+S ++++AL M+L+M++ G+DPD ITYNSLIS LCRDG+VDE
Sbjct: 417 VGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDE 476
Query: 76 AMGLLRDMENCGLKLTVITYNIVLL 2
A+GLL DME + TVI+YNIVLL
Sbjct: 477 AIGLLVDMERTEWQPTVISYNIVLL 501
Score = 204 bits (519), Expect = 8e-50
Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 1/370 (0%)
Frame = -1
Query: 1258 CKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSKAVRVMEILESHG-KPDS 1082
C GK D +L ++ L+ P V+ T LI+ ++ A+R+++ + S G +PD
Sbjct: 192 CARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDM 251
Query: 1081 FAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGSLCNRGKLGLALKMFDQ 902
+ YN +V G CK + A + + + + +P + YN+L+ L N G+ ++
Sbjct: 252 YTYNVIVRGMCKRGLVDRAFEFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSD 308
Query: 901 LLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLRPDMYTYNAITRGLCKE 722
++ CEP ++TY++LI + +G G EA+ +L M KGL PD Y Y+ + CKE
Sbjct: 309 MIVKGCEPNIVTYSVLISSLCRDGKAG--EAVDVLRVMKEKGLNPDAYCYDPLISAFCKE 366
Query: 721 GMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERLLAEMIASGCEPNVVTY 542
G VD AI FV + S G PD+++YN ++ +L +GR E + ++ GC PN +Y
Sbjct: 367 GKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSY 426
Query: 541 GILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCKEGRLDLAIAFLDYMIS 362
+ L G A+ ++ M+ G+ PD +Y+ IS+ C++G +D AI L M
Sbjct: 427 NTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMER 486
Query: 361 NGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSSYNTMISGLWNSRERMK 182
P +++YN +L LCK A+EV + GC PN ++Y ++ G+ + R
Sbjct: 487 TEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSY 546
Query: 181 ALGMVLDMVN 152
A+ + +V+
Sbjct: 547 AVELAKSLVS 556
>ref|XP_007144014.1| hypothetical protein PHAVU_007G121900g [Phaseolus vulgaris]
gi|561017204|gb|ESW16008.1| hypothetical protein
PHAVU_007G121900g [Phaseolus vulgaris]
Length = 570
Score = 588 bits (1516), Expect = e-165
Identities = 287/496 (57%), Positives = 370/496 (74%), Gaps = 4/496 (0%)
Frame = -1
Query: 1477 SADFLPHCIPFSTTTKPSKRSHQNLIANCRNPNSKDPNPTSQP----KLKIFAESRATHL 1310
S +FL H + T +K + N + CR P + NP+ + K S T
Sbjct: 5 STEFLSHTLSLRTNSKGAWHPKPNTVITCRIPVLNEDNPSKRKNNYNKGNGRVSSSDTRP 64
Query: 1309 QSLDFKDTHLLKLFQRSCKAGKYDESLYFLELLVNKGYTPDVVLCTKLIKGFFNSRNVSK 1130
+ DF+DTH ++ R C+ GKY E+LYFLE +V +GY PDV+LCTKLIKG F S+ K
Sbjct: 65 RHYDFRDTHHMRALNRLCRTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKKTEK 124
Query: 1129 AVRVMEILESHGKPDSFAYNAMVSGFCKVNQIRFATKVLDRMRSQGCSPDVVSYNILIGS 950
AV+VMEILE HG PD+FAYNA++SGFC+ ++ A VL RM+++G SPDVV+YNILIGS
Sbjct: 125 AVQVMEILEQHGDPDAFAYNAVISGFCRSDRFDAANGVLLRMKNRGFSPDVVTYNILIGS 184
Query: 949 LCNRGKLGLALKMFDQLLQDDCEPTVITYTILIEATIVEGGNGINEAMKLLDEMLSKGLR 770
LC RGKL LA+K+ DQL++D+C PTVITYTILIEATI+ G I++AMKLLDEM+S+GL+
Sbjct: 185 LCARGKLDLAMKVMDQLMKDNCNPTVITYTILIEATIIHGV--IDKAMKLLDEMVSRGLQ 242
Query: 769 PDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRALLNRGRWSEGERL 590
PDMYTYN I RG+CK G+VD A EFV +L + P + YN++L+ LLN GRW GERL
Sbjct: 243 PDMYTYNVIVRGMCKRGLVDRAFEFVCNLSTT---PSLNLYNLVLKGLLNEGRWKTGERL 299
Query: 589 LAEMIASGCEPNVVTYGILINLLCHDGKVEDAIDVLKVMMEEGLAPDSYSYDPFISAFCK 410
+++M+ GCEPNVVTY +LIN LC DGK +A+D+LKVM E+GL+PD+Y YDP ISAFCK
Sbjct: 300 MSDMMVKGCEPNVVTYSVLINSLCRDGKTGEAVDLLKVMKEKGLSPDAYCYDPLISAFCK 359
Query: 409 EGRLDLAIAFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEVFEKLGTTGCPPNVSS 230
EG++DLAI F+D M+S G PDI+NYN+I+ +LCK G +AL +F+KL GCPPNVSS
Sbjct: 360 EGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLCKKGRGDEALSIFKKLDEVGCPPNVSS 419
Query: 229 YNTMISGLWNSRERMKALGMVLDMVNKGIDPDEITYNSLISCLCRDGLVDEAMGLLRDME 50
YNTM+ LW+S ++++AL MVL+M+N G+DPD ITYNSLISCLCRDG+VDEA+GLL DME
Sbjct: 420 YNTMLGALWSSGDKIRALRMVLEMLNNGLDPDRITYNSLISCLCRDGMVDEAIGLLVDME 479
Query: 49 NCGLKLTVITYNIVLL 2
+ TVI+YNIVLL
Sbjct: 480 RSEWQPTVISYNIVLL 495