BLASTX nr result
ID: Cocculus23_contig00024580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00024580
(484 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB56509.1| F-box protein [Morus notabilis] 121 9e-26
ref|XP_006434705.1| hypothetical protein CICLE_v10000831mg [Citr... 118 7e-25
ref|XP_006374882.1| hypothetical protein POPTR_0014s02370g [Popu... 112 4e-23
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi... 110 2e-22
ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240... 109 3e-22
ref|XP_007225777.1| hypothetical protein PRUPE_ppa004591mg [Prun... 108 6e-22
ref|XP_002301165.1| F-box family protein [Populus trichocarpa] g... 107 2e-21
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc... 105 5e-21
ref|XP_007017145.1| VIER F-box protein 1 [Theobroma cacao] gi|50... 105 7e-21
ref|XP_004291070.1| PREDICTED: F-box protein At1g47056-like [Fra... 105 9e-21
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly... 105 9e-21
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355... 104 1e-20
gb|EXB59522.1| F-box protein SKIP2 [Morus notabilis] 102 6e-20
ref|XP_004499020.1| PREDICTED: F-box protein At1g47056-like [Cic... 100 2e-19
ref|NP_175151.1| VIER F-box protein 1 [Arabidopsis thaliana] gi|... 100 2e-19
ref|XP_003550322.1| PREDICTED: F-box protein At1g47056-like [Gly... 100 2e-19
ref|XP_006306435.1| hypothetical protein CARUB_v10012377mg [Caps... 100 3e-19
ref|XP_004238126.1| PREDICTED: F-box protein At1g47056-like [Sol... 100 3e-19
ref|XP_006343196.1| PREDICTED: F-box protein SKIP2-like [Solanum... 98 1e-18
ref|XP_006858612.1| hypothetical protein AMTR_s00198p00016850 [A... 98 1e-18
>gb|EXB56509.1| F-box protein [Morus notabilis]
Length = 540
Score = 121 bits (304), Expect = 9e-26
Identities = 67/99 (67%), Positives = 74/99 (74%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
H+ KA+STA+ISP E D T T G DYIS L DECLA VFQSL+SGDRK C
Sbjct: 20 HRLKAKSTALISPMQGDETDAPQVST---TNGVSDYISDLPDECLAFVFQSLSSGDRKRC 76
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVCRRWL+VEGQSR RLSL+A SDL P IPSLFSRFD+
Sbjct: 77 SLVCRRWLKVEGQSRHRLSLNAQSDLFPMIPSLFSRFDA 115
>ref|XP_006434705.1| hypothetical protein CICLE_v10000831mg [Citrus clementina]
gi|568838547|ref|XP_006473272.1| PREDICTED: F-box
protein At1g47056-like [Citrus sinensis]
gi|557536827|gb|ESR47945.1| hypothetical protein
CICLE_v10000831mg [Citrus clementina]
Length = 529
Score = 118 bits (296), Expect = 7e-25
Identities = 63/95 (66%), Positives = 70/95 (73%)
Frame = +1
Query: 196 KARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCCSLV 375
K++STAVISP E E P DYIS L DECLA +FQSL+SGDRK CSLV
Sbjct: 23 KSKSTAVISPMHADESSAELP-----DGTAYDYISNLPDECLACIFQSLSSGDRKRCSLV 77
Query: 376 CRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFD 480
CRRWLR+EGQSR RLSL+A S+LLP IPSLFSRFD
Sbjct: 78 CRRWLRIEGQSRHRLSLNAQSELLPMIPSLFSRFD 112
>ref|XP_006374882.1| hypothetical protein POPTR_0014s02370g [Populus trichocarpa]
gi|550323191|gb|ERP52679.1| hypothetical protein
POPTR_0014s02370g [Populus trichocarpa]
Length = 534
Score = 112 bits (281), Expect = 4e-23
Identities = 63/99 (63%), Positives = 72/99 (72%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
H+ K++ T I P + EE EF + G DYIS L DECLA +FQSLNSGDRK C
Sbjct: 22 HRSKSKFTVPIMPVQV-EEQTEF----IFCEGP-DYISDLPDECLACIFQSLNSGDRKHC 75
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVCRRWLR+EGQSR RLSL+A SDLLP +P LFSRFDS
Sbjct: 76 SLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDS 114
>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
Length = 541
Score = 110 bits (276), Expect = 2e-22
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Frame = +1
Query: 187 HQKKARSTAVIS-PSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKC 363
H ++RS +++ PS EE+++F + D DYIS L DECLA +FQSL SGDRK
Sbjct: 21 HPHRSRSKSMVQIPSMQVEENVQFR----QIDEDLDYISDLPDECLACIFQSLGSGDRKQ 76
Query: 364 CSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
CSLVCRRWLR+EGQ+R RLSL+A SDLL +PSLFSRFD+
Sbjct: 77 CSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDA 116
>ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240761|gb|ABD32619.1|
Cyclin-like F-box [Medicago truncatula]
gi|355478176|gb|AES59379.1| F-box protein [Medicago
truncatula]
Length = 547
Score = 109 bits (273), Expect = 3e-22
Identities = 63/101 (62%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Frame = +1
Query: 193 KKARSTAVISP--SSLSEEDLEFPVT*V--ETAGDCDYISYLADECLARVFQSLNSGDRK 360
K RSTA++SP S+ +D+ PV + G+ DYIS L DECLA VFQSLN DR
Sbjct: 23 KTTRSTALVSPMISTDDGDDVADPVDGDGNDGIGNSDYISDLPDECLAIVFQSLNPSDRN 82
Query: 361 CCSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
CSLVCRRWL VEGQSR RLSL+A DLLP IPSLF+RFDS
Sbjct: 83 QCSLVCRRWLHVEGQSRQRLSLNAKLDLLPVIPSLFNRFDS 123
>ref|XP_007225777.1| hypothetical protein PRUPE_ppa004591mg [Prunus persica]
gi|462422713|gb|EMJ26976.1| hypothetical protein
PRUPE_ppa004591mg [Prunus persica]
Length = 501
Score = 108 bits (271), Expect = 6e-22
Identities = 61/99 (61%), Positives = 69/99 (69%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
++ K +STA I P +E E V A D+IS L DECLA +FQSL S DRK C
Sbjct: 21 NRSKPKSTAAICPMEAEDESSEI----VNAA--YDFISDLPDECLACIFQSLGSRDRKQC 74
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVC RWLR+EGQSR RLSLDA SDLLP IPSLFSRFD+
Sbjct: 75 SLVCLRWLRIEGQSRHRLSLDAKSDLLPFIPSLFSRFDA 113
>ref|XP_002301165.1| F-box family protein [Populus trichocarpa]
gi|222842891|gb|EEE80438.1| F-box family protein
[Populus trichocarpa]
Length = 533
Score = 107 bits (266), Expect = 2e-21
Identities = 60/98 (61%), Positives = 72/98 (73%)
Frame = +1
Query: 190 QKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCCS 369
+ K++ T I P + EE E+ + VE DYIS L DECLA +FQSL+SGDRK CS
Sbjct: 22 RSKSKFTVPIIPMQV-EEQTEYVL--VEAP---DYISDLPDECLACIFQSLSSGDRKSCS 75
Query: 370 LVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
LVCRRWLR+EGQSR RLSL+A SDLLP + SLFSRFD+
Sbjct: 76 LVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDA 113
>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
protein At1g47056-like [Cucumis sativus]
Length = 535
Score = 105 bits (263), Expect = 5e-21
Identities = 58/99 (58%), Positives = 69/99 (69%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
H+ K +STA+ISP L E D + G D+IS L DECLA +FQSL+S DRK C
Sbjct: 20 HRSKIKSTALISPMHLDETDDVQEII----HGASDFISDLPDECLACIFQSLSSVDRKGC 75
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVCRRW +VEGQSR RLSL A +DL IPSLF+RFD+
Sbjct: 76 SLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDA 114
>ref|XP_007017145.1| VIER F-box protein 1 [Theobroma cacao] gi|508722473|gb|EOY14370.1|
VIER F-box protein 1 [Theobroma cacao]
Length = 533
Score = 105 bits (262), Expect = 7e-21
Identities = 59/99 (59%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +1
Query: 190 QKKARSTAVISPSSLSE-EDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
+ K++STA+I P E EDL+ G D+IS L DECLA +FQSL+ GDRK C
Sbjct: 21 RSKSKSTALICPMQAEEAEDLDRR----SIDGLSDFISDLPDECLACIFQSLSPGDRKRC 76
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVC RWLR+EGQSR RLSL+A SDL P IPS+FSRFD+
Sbjct: 77 SLVCWRWLRIEGQSRHRLSLNAQSDLHPLIPSIFSRFDA 115
>ref|XP_004291070.1| PREDICTED: F-box protein At1g47056-like [Fragaria vesca subsp.
vesca]
Length = 528
Score = 105 bits (261), Expect = 9e-21
Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEED---LEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDR 357
H+ K+ + A+ISP EE L+F DYIS L DECLA +F SL SGDR
Sbjct: 20 HRSKSIAAALISPMLAPEESGEVLDFAT---------DYISDLPDECLACIFHSLGSGDR 70
Query: 358 KCCSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
K CSLVCRRWL VEGQSR RLSL+A +DL PSI SLFSRFD+
Sbjct: 71 KRCSLVCRRWLTVEGQSRHRLSLNAQADLQPSIGSLFSRFDA 112
>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
Length = 549
Score = 105 bits (261), Expect = 9e-21
Identities = 59/101 (58%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
Frame = +1
Query: 196 KARSTAVISP-----SSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRK 360
K RSTA+I+P S E++ E T DYIS L +ECLA VFQ L+S DR
Sbjct: 27 KTRSTALITPMAGYSSGAGEDESENRRGEAVTDETTDYISDLPNECLASVFQFLSSADRN 86
Query: 361 CCSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
CSLVCRRWL++EGQSR RLSL+A DL P+IPSLFSRFDS
Sbjct: 87 RCSLVCRRWLQIEGQSRHRLSLNADEDLFPAIPSLFSRFDS 127
>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
skip-2, putative [Ricinus communis]
Length = 536
Score = 104 bits (260), Expect = 1e-20
Identities = 56/99 (56%), Positives = 71/99 (71%)
Frame = +1
Query: 187 HQKKARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
++ K++STA+ISP E + + V + DYIS L DECLA +FQSL+ DR+ C
Sbjct: 18 YRSKSKSTALISPMQTEEPNDKDDVVLIINESP-DYISDLPDECLACIFQSLSPSDRQRC 76
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVCRRWLR+EGQSR RLSL A SDLLP I +LF+RFD+
Sbjct: 77 SLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDA 115
>gb|EXB59522.1| F-box protein SKIP2 [Morus notabilis]
Length = 567
Score = 102 bits (254), Expect = 6e-20
Identities = 55/94 (58%), Positives = 66/94 (70%)
Frame = +1
Query: 202 RSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCCSLVCR 381
R +AVIS S E +E P +G DY L DECLA VFQ L +GDRK CSLVC+
Sbjct: 19 RPSAVIS----SVEQIEEPEVSESVSGGRDYTFDLPDECLALVFQFLGAGDRKRCSLVCK 74
Query: 382 RWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
RW RV+GQ+R RLSL+A SD+LP +PSLF+RFDS
Sbjct: 75 RWFRVDGQNRCRLSLNAQSDILPFVPSLFARFDS 108
>ref|XP_004499020.1| PREDICTED: F-box protein At1g47056-like [Cicer arietinum]
Length = 546
Score = 100 bits (250), Expect = 2e-19
Identities = 59/99 (59%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 193 KKARSTAVISPSSLSEE--DLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCC 366
K RST ++ P + E+ D PV + DYIS L DECLA VFQSL+S DR C
Sbjct: 27 KTTRSTDLVFPMTAGEDEDDNRDPVH----GENSDYISDLPDECLAIVFQSLSSADRNRC 82
Query: 367 SLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
SLVCRRWL VEGQSR RLSL+A DLLP I SLF+RFDS
Sbjct: 83 SLVCRRWLLVEGQSRQRLSLNAQLDLLPVIDSLFTRFDS 121
>ref|NP_175151.1| VIER F-box protein 1 [Arabidopsis thaliana]
gi|75268183|sp|Q9C626.1|FB37_ARATH RecName: Full=F-box
protein At1g47056 gi|12321015|gb|AAG50633.1|AC083835_18
hypothetical protein [Arabidopsis thaliana]
gi|332194013|gb|AEE32134.1| VIER F-box protein 1
[Arabidopsis thaliana]
Length = 518
Score = 100 bits (250), Expect = 2e-19
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = +1
Query: 247 LEFPVT*VETA-GDCDYISYLADECLARVFQSLNSGDRKCCSLVCRRWLRVEGQSRSRLS 423
L+FP+ +E+ DY S L DECLA VFQ LNSG+RK C+LVCRRW+ VEGQ+R RLS
Sbjct: 23 LKFPIESIESEISQPDYTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLS 82
Query: 424 LDAVSDLLPSIPSLFSRFDS 483
L A SDL+ SIPSLFSRFDS
Sbjct: 83 LHARSDLITSIPSLFSRFDS 102
>ref|XP_003550322.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
Length = 563
Score = 100 bits (250), Expect = 2e-19
Identities = 59/104 (56%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Frame = +1
Query: 187 HQKKARSTAVISP-----SSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSG 351
+ K R TA +SP S +EE V V DYIS L +ECLA VFQ L+S
Sbjct: 24 NSSKTRFTASVSPMAGYSSGAAEEGENHRVEAVADEST-DYISDLPNECLASVFQFLSSA 82
Query: 352 DRKCCSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
DR CSLVCRRWL++EGQSR RLSL+A DL P+IPSLFSRFDS
Sbjct: 83 DRSRCSLVCRRWLQIEGQSRHRLSLNAELDLFPAIPSLFSRFDS 126
>ref|XP_006306435.1| hypothetical protein CARUB_v10012377mg [Capsella rubella]
gi|482575146|gb|EOA39333.1| hypothetical protein
CARUB_v10012377mg [Capsella rubella]
Length = 521
Score = 100 bits (248), Expect = 3e-19
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +1
Query: 199 ARSTAVISPSSLSEEDLEFPVT*VET-AGDCDYISYLADECLARVFQSLNSGDRKCCSLV 375
A ++ + L+FP+ +E+ DY S L DECLA VFQ LN+G+RK C+LV
Sbjct: 7 AAGNSIFNHRKTKSFSLKFPIQPIESEVSQPDYTSCLPDECLALVFQFLNTGNRKRCALV 66
Query: 376 CRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
CRRW+ VEGQ+R RLSL A SDL+ S+PSLFSRFDS
Sbjct: 67 CRRWMIVEGQNRYRLSLHARSDLITSVPSLFSRFDS 102
>ref|XP_004238126.1| PREDICTED: F-box protein At1g47056-like [Solanum lycopersicum]
Length = 534
Score = 100 bits (248), Expect = 3e-19
Identities = 56/96 (58%), Positives = 68/96 (70%)
Frame = +1
Query: 196 KARSTAVISPSSLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCCSLV 375
K+RS+ VIS S+ E D V V G+ DY S + DECLA +F L+SGDRK SLV
Sbjct: 16 KSRSSPVIS--SMKEIDDSDDVIDVFDVGEFDYSSNIPDECLACIFHFLSSGDRKSSSLV 73
Query: 376 CRRWLRVEGQSRSRLSLDAVSDLLPSIPSLFSRFDS 483
CRRWLRVEGQSR RLSL+A S+L+ +P +FSRFDS
Sbjct: 74 CRRWLRVEGQSRHRLSLNAQSELVAVVPVIFSRFDS 109
>ref|XP_006343196.1| PREDICTED: F-box protein SKIP2-like [Solanum tuberosum]
Length = 549
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = +1
Query: 229 SLSEEDLEFPVT*VETAGDCDYISYLADECLARVFQSLNSGDRKCCSLVCRRWLRVEGQS 408
+LSEED +FP++ + + DY L DECLA +FQSL+SGDRK SLVCRRWL VEG S
Sbjct: 36 TLSEED-DFPIS--QPCENRDYTDGLPDECLALIFQSLSSGDRKRSSLVCRRWLLVEGVS 92
Query: 409 RSRLSLDAVSDLLPSIPSLFSRFDS 483
R RLSL+A ++++P IP++FSRFDS
Sbjct: 93 RHRLSLNAKAEIIPDIPTIFSRFDS 117
>ref|XP_006858612.1| hypothetical protein AMTR_s00198p00016850 [Amborella trichopoda]
gi|548862722|gb|ERN20079.1| hypothetical protein
AMTR_s00198p00016850 [Amborella trichopoda]
Length = 517
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/64 (76%), Positives = 52/64 (81%)
Frame = +1
Query: 289 DYISYLADECLARVFQSLNSGDRKCCSLVCRRWLRVEGQSRSRLSLDAVSDLLPSIPSLF 468
D IS L DECLA +FQSL GDRK CSLVC+RWLRVEGQSR RLSLDA S LL +IPSLF
Sbjct: 34 DLISELPDECLACIFQSLGPGDRKRCSLVCKRWLRVEGQSRQRLSLDATSHLLTAIPSLF 93
Query: 469 SRFD 480
RFD
Sbjct: 94 VRFD 97