BLASTX nr result
ID: Cocculus23_contig00023473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023473
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223... 93 3e-17
ref|XP_004230417.1| PREDICTED: superkiller viralicidic activity ... 89 8e-16
ref|XP_006349284.1| PREDICTED: superkiller viralicidic activity ... 88 1e-15
emb|CBI24348.3| unnamed protein product [Vitis vinifera] 86 7e-15
ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity ... 86 7e-15
ref|XP_006385084.1| ATP-dependent RNA helicase family protein [P... 79 5e-13
ref|XP_007023105.1| RNA helicase, ATP-dependent, SK12/DOB1 prote... 79 9e-13
gb|EYU33293.1| hypothetical protein MIMGU_mgv1a000749mg [Mimulus... 77 3e-12
gb|EXB80399.1| Superkiller viralicidic activity 2-like 2 [Morus ... 76 6e-12
ref|XP_006300672.1| hypothetical protein CARUB_v10019704mg [Caps... 74 2e-11
ref|NP_176185.1| putative RNA helicase MTR4 [Arabidopsis thalian... 74 3e-11
ref|XP_002886661.1| hypothetical protein ARALYDRAFT_893587 [Arab... 71 2e-10
ref|XP_007208112.1| hypothetical protein PRUPE_ppa000814mg [Prun... 69 5e-10
ref|XP_006858736.1| hypothetical protein AMTR_s00066p00125980 [A... 69 9e-10
ref|XP_006487304.1| PREDICTED: mRNA transport homolog 4-like [Ci... 68 2e-09
ref|XP_006487272.1| PREDICTED: superkiller viralicidic activity ... 68 2e-09
ref|XP_006423518.1| hypothetical protein CICLE_v10027747mg [Citr... 68 2e-09
ref|XP_006392240.1| hypothetical protein EUTSA_v10023236mg [Eutr... 68 2e-09
ref|XP_004300008.1| PREDICTED: superkiller viralicidic activity ... 68 2e-09
gb|AFW86220.1| hypothetical protein ZEAMMB73_184778 [Zea mays] 68 2e-09
>ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223532762|gb|EEF34541.1|
helicase, putative [Ricinus communis]
Length = 991
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/77 (62%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRSDEFVTCLHDVSYPEGYVPRP----WAAKE 249
M LKRKS+E PS S+PPQKQ R+ +DE V CLHDVSYPE YVP P K+
Sbjct: 1 MALLKRKSVEYPSGESLPPQKQQRENGMATADEPVACLHDVSYPENYVPPPRLDSSVQKD 60
Query: 250 SKPAKEFPFELDPFQSE 300
KPAKEFPF LDPFQSE
Sbjct: 61 LKPAKEFPFTLDPFQSE 77
>ref|XP_004230417.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Solanum
lycopersicum]
Length = 991
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/77 (59%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRSDEFVTCLHDVSYPEGYVPRPWAA----KE 249
M + KRKS E +E IPP KQL+ + +DE VTCLHDVSYPEGYVP + ++
Sbjct: 1 MGSFKRKSQEFSNEDDIPPSKQLKQNDLLGADEPVTCLHDVSYPEGYVPSASTSGLPQQD 60
Query: 250 SKPAKEFPFELDPFQSE 300
SKPAKEFPF LDPFQSE
Sbjct: 61 SKPAKEFPFPLDPFQSE 77
>ref|XP_006349284.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Solanum
tuberosum]
Length = 992
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRSDEFVTCLHDVSYPEGYVPRPWAA----KE 249
M + KRKS E +E IPP KQL+ + DE VTCLHDVSYPEGYVP + ++
Sbjct: 1 MGSFKRKSQEFSNEGDIPPSKQLKQNDLLGVDEPVTCLHDVSYPEGYVPSASTSGLPQQD 60
Query: 250 SKPAKEFPFELDPFQSE 300
SKPAKEFPF LDPFQSE
Sbjct: 61 SKPAKEFPFPLDPFQSE 77
>emb|CBI24348.3| unnamed protein product [Vitis vinifera]
Length = 968
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLR-DEVSIRS-DEFVTCLHDVSYPEGYVPRPWAA---- 243
M +LKRKS E+PS + PQKQ R D S+ + +E V C+HDVSYPEGY PR +
Sbjct: 1 MGSLKRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSPR 60
Query: 244 KESKPAKEFPFELDPFQSE 300
K+SKPAKEFPF LDPFQSE
Sbjct: 61 KDSKPAKEFPFTLDPFQSE 79
>ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Vitis
vinifera]
Length = 994
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLR-DEVSIRS-DEFVTCLHDVSYPEGYVPRPWAA---- 243
M +LKRKS E+PS + PQKQ R D S+ + +E V C+HDVSYPEGY PR +
Sbjct: 1 MGSLKRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSPR 60
Query: 244 KESKPAKEFPFELDPFQSE 300
K+SKPAKEFPF LDPFQSE
Sbjct: 61 KDSKPAKEFPFTLDPFQSE 79
>ref|XP_006385084.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
gi|550341852|gb|ERP62881.1| ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 1012
Score = 79.3 bits (194), Expect = 5e-13
Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 17/90 (18%)
Frame = +1
Query: 82 METLKRKSIENPSEAS--IPPQKQLRDEVS---------IRSDEFVTCLHDVSYPEGYVP 228
M ++KRKSIE+ E +PPQKQLR++ S I E V CLHDVSYPE YV
Sbjct: 1 MASVKRKSIESQQEDRPLLPPQKQLREDHSNNNSSSSKIIGHGEAVACLHDVSYPENYV- 59
Query: 229 RPWAA------KESKPAKEFPFELDPFQSE 300
RP ++ K+SKPAKEFPF LDPFQSE
Sbjct: 60 RPSSSSVTQIQKDSKPAKEFPFTLDPFQSE 89
>ref|XP_007023105.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Theobroma cacao]
gi|508778471|gb|EOY25727.1| RNA helicase, ATP-dependent,
SK12/DOB1 protein [Theobroma cacao]
Length = 987
Score = 78.6 bits (192), Expect = 9e-13
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRSDEFVTCLHDVSYPEGYVPRPWAA--KESK 255
M +LKRKS + + PQKQ + + S+ +DE V C+H+VSYP+GYVP + +SK
Sbjct: 1 MGSLKRKSEGEEASSESLPQKQHKGDGSVMADEAVGCVHEVSYPDGYVPSTSSTVPADSK 60
Query: 256 PAKEFPFELDPFQSE 300
PAKEFPF LDPFQSE
Sbjct: 61 PAKEFPFTLDPFQSE 75
>gb|EYU33293.1| hypothetical protein MIMGU_mgv1a000749mg [Mimulus guttatus]
Length = 996
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Frame = +1
Query: 82 METLKRKSIENPSEA-SIPPQKQLRDEVSIR--SDEFVTCLHDVSYPEGYVPRPWAA--- 243
M ++KRKS + E PP KQ R+ S+ +DE V CLHDVSYPEGYVPR ++
Sbjct: 1 MGSVKRKSTKEAGEDYGTPPLKQQRENDSVVGITDEPVACLHDVSYPEGYVPRASSSSVL 60
Query: 244 --KESKPAKEFPFELDPFQSE 300
++SKPAKEFPF LDPFQ E
Sbjct: 61 NNEDSKPAKEFPFTLDPFQLE 81
>gb|EXB80399.1| Superkiller viralicidic activity 2-like 2 [Morus notabilis]
Length = 968
Score = 75.9 bits (185), Expect = 6e-12
Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRS---DEFVTCLHDVSYPEGYVPRPWAAKES 252
M +LKRKS ENPS + PQKQ + + DE V CLHDVSYP+GY+P P ++
Sbjct: 1 MGSLKRKSDENPSGET--PQKQFHRDNGLLGRLDDEPVACLHDVSYPDGYIPPPSSSSSG 58
Query: 253 K----PAKEFPFELDPFQSE 300
K PAK FPF LDPFQSE
Sbjct: 59 KEGLEPAKVFPFSLDPFQSE 78
>ref|XP_006300672.1| hypothetical protein CARUB_v10019704mg [Capsella rubella]
gi|482569382|gb|EOA33570.1| hypothetical protein
CARUB_v10019704mg [Capsella rubella]
Length = 1046
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLR--DEVSIRSDEFVTCLHDVSYPEGYVPRPWAAKESK 255
M ++KRKS+E S PP+K R D I ++E V C+HDVS+PE YVP +
Sbjct: 58 MGSVKRKSLEESSSDCAPPKKVQREDDSTQIINEELVGCVHDVSFPENYVPLAPSVDNKP 117
Query: 256 PAKEFPFELDPFQSE 300
PAKEFPF LD FQSE
Sbjct: 118 PAKEFPFTLDSFQSE 132
>ref|NP_176185.1| putative RNA helicase MTR4 [Arabidopsis thaliana]
gi|5080810|gb|AAD39319.1|AC007258_8 Very similar to
helicases [Arabidopsis thaliana]
gi|51971869|dbj|BAD44599.1| hypothetical protein
[Arabidopsis thaliana] gi|332195495|gb|AEE33616.1|
putative RNA helicase MTR4 [Arabidopsis thaliana]
Length = 988
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLR--DEVSIRSDEFVTCLHDVSYPEGYVPRPWAAKESK 255
M ++KRKS+E S+ S PPQK R D I ++E V C+HDVS+PE YVP +
Sbjct: 1 MGSVKRKSVEESSD-SAPPQKVQREDDSTQIINEELVGCVHDVSFPENYVPLAPSVHNKP 59
Query: 256 PAKEFPFELDPFQSE 300
PAK+FPF LD FQSE
Sbjct: 60 PAKDFPFTLDSFQSE 74
>ref|XP_002886661.1| hypothetical protein ARALYDRAFT_893587 [Arabidopsis lyrata subsp.
lyrata] gi|297332502|gb|EFH62920.1| hypothetical protein
ARALYDRAFT_893587 [Arabidopsis lyrata subsp. lyrata]
Length = 988
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVS--IRSDEFVTCLHDVSYPEGYVPRPWAAKESK 255
M ++KRKS+E S+ S PPQK R++ S I ++E V C+HDVS+PE YVP +
Sbjct: 1 MGSVKRKSVEVSSD-SAPPQKVQREDDSSQIINEELVGCVHDVSFPENYVPLAPSVHAKP 59
Query: 256 PAKEFPFELDPFQSE 300
PAK FPF LD FQSE
Sbjct: 60 PAKNFPFTLDSFQSE 74
>ref|XP_007208112.1| hypothetical protein PRUPE_ppa000814mg [Prunus persica]
gi|462403754|gb|EMJ09311.1| hypothetical protein
PRUPE_ppa000814mg [Prunus persica]
Length = 995
Score = 69.3 bits (168), Expect = 5e-10
Identities = 42/79 (53%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRS--DEFVTCLHDVSYPEGYVPRP----WAA 243
M +LKRKS E +EA QKQ + E + DE V CLHDVSYPEG+V P A
Sbjct: 1 MGSLKRKSEEAAAEAEGASQKQQKKENGFVTLDDEAVACLHDVSYPEGFVVPPSSSASAG 60
Query: 244 KESKPAKEFPFELDPFQSE 300
+ S+PAK+F F LDPFQSE
Sbjct: 61 EASEPAKKFNFTLDPFQSE 79
>ref|XP_006858736.1| hypothetical protein AMTR_s00066p00125980 [Amborella trichopoda]
gi|548862847|gb|ERN20203.1| hypothetical protein
AMTR_s00066p00125980 [Amborella trichopoda]
Length = 995
Score = 68.6 bits (166), Expect = 9e-10
Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQ-KQLRDEVS--IRSDEFVTCLHDVSYPEGYVPR--PWAAK 246
M +LKRK+++ SE + P K +D S + S++ VTC HDVSYPEG+V R P
Sbjct: 1 MGSLKRKTLDGSSEEDLNPSLKHQKDGNSPPLLSNKPVTCHHDVSYPEGFVRRRGPEKPL 60
Query: 247 ESKPAKEFPFELDPFQSE 300
KPAKEFPFELDPFQ E
Sbjct: 61 PLKPAKEFPFELDPFQLE 78
>ref|XP_006487304.1| PREDICTED: mRNA transport homolog 4-like [Citrus sinensis]
Length = 174
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDE--VSIRSDEFVTCLHDVSYPEGYVPRPW------ 237
M +LKRKSI S + P + + + DE V CLHDVS+P GYVP
Sbjct: 1 MASLKRKSIMEDSYETPQPMQNSNGNGTMIVNDDEPVACLHDVSFPPGYVPSSSSTGAAA 60
Query: 238 AAKESKPAKEFPFELDPFQSE 300
A ++KPAKEFPF LDPFQSE
Sbjct: 61 AEADAKPAKEFPFTLDPFQSE 81
>ref|XP_006487272.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Citrus
sinensis]
Length = 996
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDE--VSIRSDEFVTCLHDVSYPEGYVPRPW------ 237
M +LKRKSI S + P + + + DE V CLHDVS+P GYVP
Sbjct: 1 MASLKRKSIMEDSYETPQPMQNSNGNGTMIVNDDEPVACLHDVSFPPGYVPSSSSTGAAA 60
Query: 238 AAKESKPAKEFPFELDPFQSE 300
A ++KPAKEFPF LDPFQSE
Sbjct: 61 AEADAKPAKEFPFTLDPFQSE 81
>ref|XP_006423518.1| hypothetical protein CICLE_v10027747mg [Citrus clementina]
gi|557525452|gb|ESR36758.1| hypothetical protein
CICLE_v10027747mg [Citrus clementina]
Length = 996
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDE--VSIRSDEFVTCLHDVSYPEGYVPRPW------ 237
M +LKRKSI S + P + + + DE V CLHDVS+P GYVP
Sbjct: 1 MASLKRKSIMEDSYETPQPMQNSNGNGTMIVNDDEPVACLHDVSFPPGYVPSSSSTGAAA 60
Query: 238 AAKESKPAKEFPFELDPFQSE 300
A ++KPAKEFPF LDPFQSE
Sbjct: 61 AEADAKPAKEFPFTLDPFQSE 81
>ref|XP_006392240.1| hypothetical protein EUTSA_v10023236mg [Eutrema salsugineum]
gi|557088746|gb|ESQ29526.1| hypothetical protein
EUTSA_v10023236mg [Eutrema salsugineum]
Length = 990
Score = 67.8 bits (164), Expect = 2e-09
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVS--IRSDEFVTCLHDVSYPEGYVP-RPWAAKES 252
M ++KRKS ++ S+ + PPQK ++E S I ++E V C+HDVS+PE YVP P A ++
Sbjct: 1 MGSVKRKSQDDSSDFA-PPQKVHKEEDSTQIINEELVGCVHDVSFPENYVPLAPSAQGDN 59
Query: 253 K-PAKEFPFELDPFQSE 300
K PAKEFPF LD FQSE
Sbjct: 60 KPPAKEFPFTLDSFQSE 76
>ref|XP_004300008.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Fragaria
vesca subsp. vesca]
Length = 983
Score = 67.8 bits (164), Expect = 2e-09
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +1
Query: 82 METLKRKSIENPSEASIPPQKQLRDEVSIRSDEFVTCLHDVSYPEGYV--PRPWAAKESK 255
M +LKRK E+ S + PP K + E +DE C+HDVSYPEGYV P P + S+
Sbjct: 1 MGSLKRKPEEDGSGS--PPSKVAKSE----TDEQRVCVHDVSYPEGYVPPPPPPPPEGSE 54
Query: 256 PAKEFPFELDPFQSE 300
PAK+FPF LDPFQSE
Sbjct: 55 PAKKFPFTLDPFQSE 69
>gb|AFW86220.1| hypothetical protein ZEAMMB73_184778 [Zea mays]
Length = 1000
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 16/89 (17%)
Frame = +1
Query: 82 METLKRKSIENPSEA----SIPPQK-----QLRDEVSIRSDEFVTCLHDVSYPEGYVPRP 234
METLKRK++++P +A S+ P + R ++ + E V C+HDVSYPEGY P
Sbjct: 1 METLKRKAVDSPGDAYQASSLKPPLAAAAVEPRAPTTLAAAEPVACVHDVSYPEGYDPSA 60
Query: 235 -------WAAKESKPAKEFPFELDPFQSE 300
A S+PAK+FPF+LDPFQ+E
Sbjct: 61 STSRAIAGGADASEPAKKFPFQLDPFQAE 89