BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00023333
         (543 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    73   5e-11
emb|CBI35690.3| unnamed protein product [Vitis vinifera]               73   5e-11
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    73   5e-11
ref|XP_007159305.1| hypothetical protein PHAVU_002G226900g [Phas...    69   7e-10
ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal doma...    68   2e-09
ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal doma...    68   2e-09
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...    67   3e-09
ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [A...    66   5e-09
gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-l...    66   6e-09
ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Popu...    65   1e-08
ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal doma...    63   5e-08
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    63   5e-08
ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Popu...    62   9e-08
ref|XP_006848184.1| hypothetical protein AMTR_s00029p00237180 [A...    60   3e-07
ref|XP_007214548.1| hypothetical protein PRUPE_ppa000988mg [Prun...    60   3e-07
ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal doma...    60   4e-07
ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal doma...    60   4e-07
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    60   4e-07
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...    59   1e-06
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    59   1e-06

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/47 (68%), Positives = 43/47 (91%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KS+VY+G+ ++GEVEIYPQNQ +++  KEI+ISH+SQPSERCPPL
Sbjct: 1   MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/47 (68%), Positives = 43/47 (91%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KS+VY+G+ ++GEVEIYPQNQ +++  KEI+ISH+SQPSERCPPL
Sbjct: 1   MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/47 (68%), Positives = 43/47 (91%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KS+VY+G+ ++GEVEIYPQNQ +++  KEI+ISH+SQPSERCPPL
Sbjct: 1   MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46


>ref|XP_007159305.1| hypothetical protein PHAVU_002G226900g [Phaseolus vulgaris]
           gi|561032720|gb|ESW31299.1| hypothetical protein
           PHAVU_002G226900g [Phaseolus vulgaris]
          Length = 964

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQ-NQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVYQG  +LGEVE+YP+ N   +   KEI+ISHFSQPSERCPPL
Sbjct: 1   MYKSVVYQGEVVLGEVEVYPEENNYKNFHVKEIRISHFSQPSERCPPL 48


>ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X2 [Glycine max]
          Length = 929

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +3

Query: 396 LKMFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIKISHFSQPSERCPPL 542
           ++M+KSVVYQG  ++GEV++YP+  N   +   KEI+ISHFSQPSERCPPL
Sbjct: 1   MRMYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPL 51


>ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X1 [Glycine max]
          Length = 956

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +3

Query: 396 LKMFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIKISHFSQPSERCPPL 542
           ++M+KSVVYQG  ++GEV++YP+  N   +   KEI+ISHFSQPSERCPPL
Sbjct: 1   MRMYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPL 51


>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 32/49 (65%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVY G+ LLG+VEIYP+  N   ++  KEI+I+HFSQPSERCPPL
Sbjct: 1   MYKSVVYHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPL 49


>ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [Amborella trichopoda]
           gi|548832426|gb|ERM95222.1| hypothetical protein
           AMTR_s00009p00267690 [Amborella trichopoda]
          Length = 942

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMS--NKEIKISHFSQPSERCPPL 542
           MFKS VY G+SLLGE E+YP+ + +++    KEI+ISH S PSERCPPL
Sbjct: 1   MFKSAVYHGDSLLGEAEVYPEREYLNLETITKEIRISHLSLPSERCPPL 49


>gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Morus
           notabilis]
          Length = 998

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 5/52 (9%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYP-----QNQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVY+G  LLGEVEIYP      ++IID   KEI+ISHFS PSERCPPL
Sbjct: 1   MYKSVVYKGKELLGEVEIYPGENNIDHRIID-DLKEIRISHFSPPSERCPPL 51


>ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Populus trichocarpa]
           gi|550340277|gb|EEE85528.2| hypothetical protein
           POPTR_0004s04010g [Populus trichocarpa]
          Length = 996

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 13/60 (21%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQ-------------IIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVY+G+ LLGEVEIY Q Q             +ID   KEI+ISHFSQ SERCPPL
Sbjct: 1   MYKSVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKEIRISHFSQTSERCPPL 60


>ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cicer arietinum]
          Length = 951

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KS+VYQG  +LGEV+IYP+    + + KEI+ISHF+QPSERC PL
Sbjct: 1   MYKSLVYQGEVVLGEVDIYPEVNNNNKNFKEIRISHFTQPSERCLPL 47


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 8/55 (14%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQ--------NQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVYQG  ++GEV++YP+        N   +   KEI+ISHFSQPSERCPPL
Sbjct: 1   MYKSVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPL 55


>ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Populus trichocarpa]
           gi|550327613|gb|ERP55122.1| hypothetical protein
           POPTR_0011s04910g [Populus trichocarpa]
          Length = 990

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 13/60 (21%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQ-------------IIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVY+G  LLGEVEIY Q Q             +ID   K I+ISHFSQ SERCPPL
Sbjct: 1   MYKSVVYKGEELLGEVEIYAQEQQQEEEENKNKRKRVIDEIVKGIRISHFSQASERCPPL 60


>ref|XP_006848184.1| hypothetical protein AMTR_s00029p00237180 [Amborella trichopoda]
           gi|548851489|gb|ERN09765.1| hypothetical protein
           AMTR_s00029p00237180 [Amborella trichopoda]
          Length = 668

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = +3

Query: 405 FKSVVYQGNSLLGEVEIYPQNQ---IIDMSNKEIKISHFSQPSERCPPL 542
           F+S++Y G++ LGEV++ PQNQ   I+    KEI+ISH + PSERCPPL
Sbjct: 6   FRSILYHGDTCLGEVDVVPQNQNPQILSAIKKEIRISHLTAPSERCPPL 54


>ref|XP_007214548.1| hypothetical protein PRUPE_ppa000988mg [Prunus persica]
           gi|462410413|gb|EMJ15747.1| hypothetical protein
           PRUPE_ppa000988mg [Prunus persica]
          Length = 940

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 7/54 (12%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQ-------NQIIDMSNKEIKISHFSQPSERCPPL 542
           M+KSVVY+G  LLGEVEIYP+       N+ +    KEI+IS+FSQ SERCPP+
Sbjct: 1   MYKSVVYKGEELLGEVEIYPEENENKNKNKNLVDELKEIRISYFSQSSERCPPV 54


>ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X3 [Glycine max]
          Length = 932

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M +S+VY G   +GEVEIYP+ +  ++  KEI+ISHFSQPSERCPPL
Sbjct: 1   MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46


>ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X2 [Glycine max]
          Length = 937

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M +S+VY G   +GEVEIYP+ +  ++  KEI+ISHFSQPSERCPPL
Sbjct: 1   MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X1 [Glycine max]
          Length = 958

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           M +S+VY G   +GEVEIYP+ +  ++  KEI+ISHFSQPSERCPPL
Sbjct: 1   MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X1 [Glycine max]
           gi|571500215|ref|XP_006594604.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 1-like
           isoform X2 [Glycine max]
          Length = 960

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +3

Query: 411 SVVYQGNSLLGEVEIYPQNQIIDMSNKEIKISHFSQPSERCPPL 542
           S+VY G   +GEV+IYP+    +M  KEI+ISHFSQPSERCPPL
Sbjct: 4   SMVYHGEMAVGEVKIYPEENK-NMDLKEIRISHFSQPSERCPPL 46


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223541695|gb|EEF43243.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 978

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 20/67 (29%)
 Frame = +3

Query: 402 MFKSVVYQGNSLLGEVEIYPQNQ--------------------IIDMSNKEIKISHFSQP 521
           M+KSVVY+G+ LLGEVEIY Q +                    +ID   K I+ISHFSQ 
Sbjct: 1   MYKSVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKGIRISHFSQA 60

Query: 522 SERCPPL 542
           SERCPPL
Sbjct: 61  SERCPPL 67