BLASTX nr result

ID: Cocculus23_contig00023313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00023313
         (374 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB82447.1| F-box protein [Morus notabilis]                         46   2e-06

>gb|EXB82447.1| F-box protein [Morus notabilis]
          Length = 391

 Score = 46.2 bits (108), Expect(2) = 2e-06
 Identities = 34/96 (35%), Positives = 46/96 (47%)
 Frame = +2

Query: 77  NPNKHQSSNLINIMSQINGRLYSLDIESSSLSGNADHIELQSTVHCHNYLSKSSNIQGSM 256
           N +K  +SNL  ++   N  L  +D++S    G A  ++L   +             GS 
Sbjct: 47  NHSKQSNSNLAAVLFNKNDIL-RIDLDSL---GGAAAVKLNHPID-----------DGSE 91

Query: 257 PFLRGSCNGLVCLQTSDKGFVMLNPCTRSYRKLPYS 364
            F+ GSCNGLV L    +  V  NP TR YRKLP S
Sbjct: 92  IFILGSCNGLVALLNFREDVVFWNPSTRKYRKLPAS 127



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 1   LRLRFVCKAWRTLIYKPYLFQMHLKQSQQA 90
           LR R V K WR+LI  P   ++HL  S+Q+
Sbjct: 23  LRYRCVSKQWRSLIDGPDFIKLHLNHSKQS 52


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