BLASTX nr result
ID: Cocculus23_contig00023144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00023144
(530 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953088.1| PREDICTED: 40S ribosomal protein S11-like is... 142 6e-32
ref|XP_004953087.1| PREDICTED: 40S ribosomal protein S11-like is... 142 6e-32
ref|XP_002454168.1| hypothetical protein SORBIDRAFT_04g025870 [S... 142 6e-32
ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis ... 142 6e-32
ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis ... 142 6e-32
gb|ABK22030.1| unknown [Picea sitchensis] gi|116782422|gb|ABK225... 142 6e-32
ref|NP_001053235.1| Os04g0502300 [Oryza sativa Japonica Group] g... 142 6e-32
pdb|3J60|L Chain L, Localization Of The Small Subunit Ribosomal ... 141 8e-32
ref|XP_007013672.1| Ribosomal protein S11-beta [Theobroma cacao]... 141 8e-32
ref|XP_007052409.1| Ribosomal protein S11-beta isoform 2 [Theobr... 141 8e-32
ref|XP_007052408.1| Ribosomal protein S11-beta isoform 1 [Theobr... 141 8e-32
ref|XP_006291971.1| hypothetical protein CARUB_v10018158mg [Caps... 141 1e-31
ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus... 141 1e-31
ref|NP_197763.1| 40S ribosomal protein S11-3 [Arabidopsis thalia... 140 1e-31
ref|XP_006404202.1| hypothetical protein EUTSA_v10010781mg [Eutr... 140 1e-31
ref|XP_006394638.1| hypothetical protein EUTSA_v10005057mg [Eutr... 140 1e-31
ref|XP_006296532.1| hypothetical protein CARUB_v10025724mg [Caps... 140 1e-31
ref|XP_006288822.1| hypothetical protein CARUB_v10002158mg [Caps... 140 1e-31
ref|XP_006284663.1| hypothetical protein CARUB_v10005922mg [Caps... 140 1e-31
tpg|DAA37074.1| TPA: 40S ribosomal protein S11 [Zea mays] 140 1e-31
>ref|XP_004953088.1| PREDICTED: 40S ribosomal protein S11-like isoform X2 [Setaria
italica]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 71/82 (86%), Positives = 71/82 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP AFTA
Sbjct: 138 FNVLKVIPAGSKSGAVKKAFTA 159
>ref|XP_004953087.1| PREDICTED: 40S ribosomal protein S11-like isoform X1 [Setaria
italica]
Length = 174
Score = 142 bits (357), Expect = 6e-32
Identities = 71/82 (86%), Positives = 71/82 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 92 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 151
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP AFTA
Sbjct: 152 FNVLKVIPAGSKSGAVKKAFTA 173
>ref|XP_002454168.1| hypothetical protein SORBIDRAFT_04g025870 [Sorghum bicolor]
gi|242076386|ref|XP_002448129.1| hypothetical protein
SORBIDRAFT_06g021750 [Sorghum bicolor]
gi|514802485|ref|XP_004976135.1| PREDICTED: 40S
ribosomal protein S11-like [Setaria italica]
gi|241933999|gb|EES07144.1| hypothetical protein
SORBIDRAFT_04g025870 [Sorghum bicolor]
gi|241939312|gb|EES12457.1| hypothetical protein
SORBIDRAFT_06g021750 [Sorghum bicolor]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 71/82 (86%), Positives = 71/82 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP AFTA
Sbjct: 138 FNVLKVIPAGSKSGAVKKAFTA 159
>ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
gi|296084564|emb|CBI25585.3| unnamed protein product
[Vitis vinifera]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 70/83 (84%), Positives = 72/83 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMRTIIVRRNYLH+VKKYQRYEKRHSNIPAH SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHTSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTAI 280
FNVLKVIP AFTA+
Sbjct: 138 FNVLKVIPAGSSGGGGKKAFTAM 160
>ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
gi|296082102|emb|CBI21107.3| unnamed protein product
[Vitis vinifera]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMRTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>gb|ABK22030.1| unknown [Picea sitchensis] gi|116782422|gb|ABK22500.1| unknown
[Picea sitchensis] gi|148910763|gb|ABR18448.1| unknown
[Picea sitchensis] gi|224285933|gb|ACN40680.1| unknown
[Picea sitchensis]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 71/83 (85%), Positives = 72/83 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMTRTIIVRRDYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTAI 280
FNVLKVIP AFTAI
Sbjct: 138 FNVLKVIPAGSSSGSAKKAFTAI 160
>ref|NP_001053235.1| Os04g0502300 [Oryza sativa Japonica Group]
gi|113564806|dbj|BAF15149.1| Os04g0502300 [Oryza sativa
Japonica Group] gi|116310793|emb|CAH67584.1|
OSIGBa0112M24.1 [Oryza sativa Indica Group]
Length = 160
Score = 142 bits (357), Expect = 6e-32
Identities = 70/82 (85%), Positives = 70/82 (85%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP FTA
Sbjct: 138 FNVLKVIPAGSKSGAGKKVFTA 159
>pdb|3J60|L Chain L, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 160
Score = 141 bits (356), Expect = 8e-32
Identities = 69/82 (84%), Positives = 70/82 (85%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP FTA
Sbjct: 138 FNVLKVIPAGSKSGAGKKVFTA 159
>ref|XP_007013672.1| Ribosomal protein S11-beta [Theobroma cacao]
gi|508784035|gb|EOY31291.1| Ribosomal protein S11-beta
[Theobroma cacao]
Length = 159
Score = 141 bits (356), Expect = 8e-32
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMRTIIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_007052409.1| Ribosomal protein S11-beta isoform 2 [Theobroma cacao]
gi|508704670|gb|EOX96566.1| Ribosomal protein S11-beta
isoform 2 [Theobroma cacao]
Length = 159
Score = 141 bits (356), Expect = 8e-32
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMRTIIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_007052408.1| Ribosomal protein S11-beta isoform 1 [Theobroma cacao]
gi|508704669|gb|EOX96565.1| Ribosomal protein S11-beta
isoform 1 [Theobroma cacao]
Length = 186
Score = 141 bits (356), Expect = 8e-32
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMRTIIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006291971.1| hypothetical protein CARUB_v10018158mg [Capsella rubella]
gi|482560678|gb|EOA24869.1| hypothetical protein
CARUB_v10018158mg [Capsella rubella]
Length = 160
Score = 141 bits (355), Expect = 1e-31
Identities = 69/83 (83%), Positives = 71/83 (85%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIPXXXXXXXXXXAFTAI 280
FNVLKVIP AFT +
Sbjct: 138 FNVLKVIPAGSSSSFGKKAFTGM 160
>ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus communis]
gi|223527780|gb|EEF29881.1| 40S ribosomal protein S11,
putative [Ricinus communis]
Length = 159
Score = 141 bits (355), Expect = 1e-31
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKMMR+IIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMMRSIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|NP_197763.1| 40S ribosomal protein S11-3 [Arabidopsis thaliana]
gi|27735234|sp|P42733.2|RS113_ARATH RecName: Full=40S
ribosomal protein S11-3
gi|13430736|gb|AAK25990.1|AF360280_1 putative 40S
ribosomal protein S11 [Arabidopsis thaliana]
gi|10176841|dbj|BAB10047.1| 40S ribosomal protein S11
[Arabidopsis thaliana] gi|17065614|gb|AAL33787.1|
putative 40S ribosomal protein S11 [Arabidopsis
thaliana] gi|21592846|gb|AAM64796.1| 40S ribosomal
protein S11 [Arabidopsis thaliana]
gi|332005823|gb|AED93206.1| 40S ribosomal protein S11-3
[Arabidopsis thaliana]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006404202.1| hypothetical protein EUTSA_v10010781mg [Eutrema salsugineum]
gi|557105321|gb|ESQ45655.1| hypothetical protein
EUTSA_v10010781mg [Eutrema salsugineum]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006394638.1| hypothetical protein EUTSA_v10005057mg [Eutrema salsugineum]
gi|557091277|gb|ESQ31924.1| hypothetical protein
EUTSA_v10005057mg [Eutrema salsugineum]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006296532.1| hypothetical protein CARUB_v10025724mg [Capsella rubella]
gi|482565240|gb|EOA29430.1| hypothetical protein
CARUB_v10025724mg [Capsella rubella]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006288822.1| hypothetical protein CARUB_v10002158mg [Capsella rubella]
gi|482557528|gb|EOA21720.1| hypothetical protein
CARUB_v10002158mg [Capsella rubella]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>ref|XP_006284663.1| hypothetical protein CARUB_v10005922mg [Capsella rubella]
gi|482553368|gb|EOA17561.1| hypothetical protein
CARUB_v10005922mg [Capsella rubella]
Length = 159
Score = 140 bits (354), Expect = 1e-31
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVR
Sbjct: 78 SAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVR 137
Query: 348 FNVLKVIP 325
FNVLKVIP
Sbjct: 138 FNVLKVIP 145
>tpg|DAA37074.1| TPA: 40S ribosomal protein S11 [Zea mays]
Length = 571
Score = 140 bits (354), Expect = 1e-31
Identities = 70/82 (85%), Positives = 71/82 (86%)
Frame = -3
Query: 528 SAKMMRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVR 349
SAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP+SKTVR
Sbjct: 489 SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPVSKTVR 548
Query: 348 FNVLKVIPXXXXXXXXXXAFTA 283
FNVLKVIP AFTA
Sbjct: 549 FNVLKVIPAGSKSGAVKKAFTA 570