BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00021896
         (759 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007032674.1| Pentatricopeptide repeat superfamily protein...    82   3e-13
ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [A...    79   1e-12
emb|CBI22283.3| unnamed protein product [Vitis vinifera]               74   4e-11
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citr...    72   3e-10
ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutr...    69   1e-09
ref|XP_002526074.1| pentatricopeptide repeat-containing protein,...    69   2e-09
ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Popu...    68   3e-09
ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containi...    68   4e-09
gb|EAY89012.1| hypothetical protein OsI_10494 [Oryza sativa Indi...    67   7e-09
ref|NP_001049349.1| Os03g0211600 [Oryza sativa Japonica Group] g...    67   7e-09
gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group] g...    67   7e-09
ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containi...    67   9e-09
ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containi...    66   2e-08
ref|XP_006293002.1| hypothetical protein CARUB_v10019279mg [Caps...    65   2e-08
ref|XP_007214950.1| hypothetical protein PRUPE_ppa003127mg [Prun...    65   2e-08

>ref|XP_007032674.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590650578|ref|XP_007032675.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508711703|gb|EOY03600.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508711704|gb|EOY03601.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 619

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
 Frame = +3

Query: 411 LTRTTKREVGTDFHERTKVPPWG--ICDEEIQNDHNSIALQGEGTSSVSSNHSERPTWVL 584
           L +  K E G D   +  +PPWG  + DE +  +H S+     G  ++SSN  +     +
Sbjct: 115 LIQKGKEEFGLDSLGQN-LPPWGNLVVDESLDFEHTSV-----GQPAISSNGKDS----V 164

Query: 585 ENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
            ++K+ FLEE +E+ LS+R++ L +SNKV  AL+L  SM++ G+QPS HA NSL+SCL
Sbjct: 165 HDSKVHFLEETNEEELSRRVLMLSRSNKVRSALELCRSMKLSGLQPSAHACNSLLSCL 222


>ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [Amborella trichopoda]
           gi|548839630|gb|ERM99890.1| hypothetical protein
           AMTR_s00110p00040270 [Amborella trichopoda]
          Length = 622

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 14/115 (12%)
 Frame = +3

Query: 456 RTKVPPWGICDEEIQNDHNSIALQGEGTSSVSSNH-SERP------------TWVLENT- 593
           + K+PPWG+  + I  D N      + TS   SNH S+RP            + V +N  
Sbjct: 104 KAKIPPWGV--KFITEDKNV-----DSTSVFGSNHDSKRPHPDMSKPTSSSDSKVQQNEL 156

Query: 594 KLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           K+ FLEE +E+ LSKRI+ L +SNK+  AL+LYMSME+  +QP+ H+ NSL+SCL
Sbjct: 157 KMHFLEETNEESLSKRILVLSRSNKINSALELYMSMEMSSLQPNLHSCNSLISCL 211


>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
 Frame = +3

Query: 411 LTRTTKREVGTDFHERTKVPPWGICDEEIQNDHNSIALQGEGTSS--VSSNHSERPTWVL 584
           L +  K E    + E+ K PP G  +     D   I +    T S  +SS   +      
Sbjct: 119 LNQRRKEEFDPSYFEQ-KFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFED------ 171

Query: 585 ENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
              KL FLEER+E++LSKRI+ L +SNKV   L+LY +ME  G+QPS HA NSL+SCL
Sbjct: 172 ---KLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCL 226


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Vitis vinifera]
          Length = 546

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
 Frame = +3

Query: 411 LTRTTKREVGTDFHERTKVPPWGICDEEIQNDHNSIALQGEGTSS--VSSNHSERPTWVL 584
           L +  K E    + E+ K PP G  +     D   I +    T S  +SS   +      
Sbjct: 39  LNQRRKEEFDPSYFEQ-KFPPLGNSEIHKNPDFEHIGVAEPLTISTGISSEFED------ 91

Query: 585 ENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
              KL FLEER+E++LSKRI+ L +SNKV   L+LY +ME  G+QPS HA NSL+SCL
Sbjct: 92  ---KLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCL 146


>ref|XP_006431232.1| hypothetical protein CICLE_v10011344mg [Citrus clementina]
           gi|557533289|gb|ESR44472.1| hypothetical protein
           CICLE_v10011344mg [Citrus clementina]
          Length = 591

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
 Frame = +3

Query: 459 TKVPPWGICDEEIQNDHNSIALQGEGTSSVSSNHS----ERPTWVLENTKLQFLEERDEK 626
           + +PPWG          N +  QG     V S +      R        ++QFLEE +E+
Sbjct: 112 SNLPPWG----------NVVVQQGGSDVEVKSGNQPLAVSRKMAFGSEIRVQFLEEANEE 161

Query: 627 MLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           +LS+R++ L +SNKV  AL+LY SM+  G+QP+ HA NSL+SCL
Sbjct: 162 ILSRRVLMLSRSNKVRSALELYESMKCSGLQPNVHACNSLLSCL 205


>ref|XP_006482700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Citrus sinensis]
          Length = 592

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
 Frame = +3

Query: 459 TKVPPWGIC-------DEEIQNDHNSIALQGEGTSSVSSNHSERPTWVLENTKLQFLEER 617
           + +PPWG         D E+++ +  +A+ G+                    ++QFLEE 
Sbjct: 113 SNLPPWGNVVVQQGGSDVEVKSGNQPLAVSGKMAFG-------------SEIRVQFLEEA 159

Query: 618 DEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           +E++LS+R++ L +SNKV  AL+LY SM+  G+QP+ HA NSL+SCL
Sbjct: 160 NEEILSRRVLMLSRSNKVRSALELYESMKCSGLQPNVHACNSLLSCL 206


>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Cucumis sativus]
          Length = 600

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +3

Query: 462 KVPPWGICDEEIQNDHNSIALQGEGTSSVSSNHSER--PTWVLEN-TKLQFLEERDEKML 632
           K+PPWG            IA Q E T      +  +     VLEN +KL FLEE D+ ML
Sbjct: 104 KLPPWG-----------DIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVML 152

Query: 633 SKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           SKRI+ L + NKV  AL+L  SM++ G+ PS HA NSL++CL
Sbjct: 153 SKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACL 194


>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Cucumis sativus]
          Length = 600

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +3

Query: 462 KVPPWGICDEEIQNDHNSIALQGEGTSSVSSNHSER--PTWVLEN-TKLQFLEERDEKML 632
           K+PPWG            IA Q E T      +  +     VLEN +KL FLEE D+ ML
Sbjct: 104 KLPPWG-----------DIAHQDEATFQSEDVNQPKILEGKVLENESKLHFLEETDKVML 152

Query: 633 SKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           SKRI+ L + NKV  AL+L  SM++ G+ PS HA NSL++CL
Sbjct: 153 SKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACL 194


>ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Oryza brachyantha]
          Length = 570

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 36/79 (45%), Positives = 53/79 (67%)
 Frame = +3

Query: 519 ALQGEGTSSVSSNHSERPTWVLENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMS 698
           AL G  +++ +S    RP   +  ++L FLEERDE+MLS+R++ L +SNKV  A +L+ S
Sbjct: 109 ALVGARSAAPASGAGSRPE--VGGSRLHFLEERDEEMLSRRLIKLSQSNKVRSATELFDS 166

Query: 699 MEVIGVQPSPHASNSLMSC 755
           M   G+QPS H  NSL++C
Sbjct: 167 MRASGLQPSAHGCNSLLAC 185


>ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutrema salsugineum]
           gi|557091927|gb|ESQ32574.1| hypothetical protein
           EUTSA_v10003982mg [Eutrema salsugineum]
          Length = 528

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 33/71 (46%), Positives = 49/71 (69%)
 Frame = +3

Query: 546 VSSNHSERPTWVLENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPS 725
           V +   E+P       ++ FLEER+E+MLSKR++ L + NKV  A++L+ SM  +G+QP+
Sbjct: 73  VENGSEEKPA--ANGNRIHFLEERNEEMLSKRLLKLSRLNKVRSAMELFDSMRTLGLQPN 130

Query: 726 PHASNSLMSCL 758
            HA NSL+SCL
Sbjct: 131 AHACNSLLSCL 141


>ref|XP_002526074.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534571|gb|EEF36268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 285

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 44/114 (38%), Positives = 65/114 (57%)
 Frame = +3

Query: 417 RTTKREVGTDFHERTKVPPWGICDEEIQNDHNSIALQGEGTSSVSSNHSERPTWVLENTK 596
           ++ K E+  D  E+  +PPWG         H    L   G   V  + S R T  L+ ++
Sbjct: 30  QSRKDELDMDSFEKY-LPPWGNLTV-----HQEPELDPAGI--VQPSISPRNTISLDESR 81

Query: 597 LQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           +  LEE +E+ LS+RI+ L +SNKV  AL+L+ SME  G++P+ HA NS +SCL
Sbjct: 82  VHLLEEGNEEELSRRILMLSRSNKVRSALELFRSMEFSGLRPNSHACNSFISCL 135


>ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Populus trichocarpa]
           gi|550320141|gb|EEF04021.2| hypothetical protein
           POPTR_0017s12620g [Populus trichocarpa]
          Length = 716

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 27/126 (21%)
 Frame = +3

Query: 462 KVPPWGICDEEIQNDHN----------------------SIALQGEGTSSVSSNHSERPT 575
           K+PPWGI  +  +   N                      ++ALQ +G+   +    + P+
Sbjct: 197 KLPPWGIVSDNSELVSNEKEEQDLVESGKDQFDMDSCGQNLALQ-QGSDINNEKIVQSPS 255

Query: 576 WV-----LENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASN 740
            +     +  +++ FLEE DE  LS+RI+ L +SNK+  ALQL  SME  G+QP+ HA N
Sbjct: 256 LLNNRVTVNESRVHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNRHACN 315

Query: 741 SLMSCL 758
           SL+SCL
Sbjct: 316 SLLSCL 321


>ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Fragaria vesca subsp. vesca]
          Length = 588

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
 Frame = +3

Query: 465 VPPWGICDEEIQND--HNSIALQGEGTSSVSSNHSERPTWVLENTKLQFLEERDEKMLSK 638
           +PPWG  D  I  D  H  I  +      +S N  E    VL   ++ FLEE DE+ LSK
Sbjct: 88  LPPWG--DLAIDKDPVHPDIEPEVAIRPELSLNRKE----VLNVDRVSFLEEVDEETLSK 141

Query: 639 RIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
           RI+ L ++NK   AL+L+ SME+ G+  S HA NSL+SCL
Sbjct: 142 RILVLSRTNKFRSALELFTSMELSGLVSSLHACNSLLSCL 181


>gb|EAY89012.1| hypothetical protein OsI_10494 [Oryza sativa Indica Group]
          Length = 563

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = +3

Query: 591 TKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSC 755
           ++L FLEERDE+MLS+R++ L +SNKV  A +L+ SM   G+QPS HA NSL++C
Sbjct: 142 SRLHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLAC 196


>ref|NP_001049349.1| Os03g0211600 [Oryza sativa Japonica Group]
           gi|113547820|dbj|BAF11263.1| Os03g0211600, partial
           [Oryza sativa Japonica Group]
          Length = 429

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = +3

Query: 591 TKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSC 755
           ++L FLEERDE+MLS+R++ L +SNKV  A +L+ SM   G+QPS HA NSL++C
Sbjct: 142 SRLHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLAC 196


>gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group]
           gi|125585367|gb|EAZ26031.1| hypothetical protein
           OsJ_09884 [Oryza sativa Japonica Group]
          Length = 582

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = +3

Query: 591 TKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSC 755
           ++L FLEERDE+MLS+R++ L +SNKV  A +L+ SM   G+QPS HA NSL++C
Sbjct: 142 SRLHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLAC 196


>ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Setaria italica]
          Length = 583

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = +3

Query: 591 TKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSC 755
           ++L FLEER+E+ LS+R++ LC+SNKV  A +L+ SM   G+QPS HA NSL++C
Sbjct: 142 SRLHFLEERNEETLSRRLIKLCQSNKVRSATELFDSMRASGLQPSAHACNSLLAC 196


>ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like isoform 1 [Brachypodium distachyon]
           gi|357113449|ref|XP_003558515.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g29290-like isoform 2 [Brachypodium distachyon]
           gi|357113451|ref|XP_003558516.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g29290-like isoform 3 [Brachypodium distachyon]
          Length = 574

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = +3

Query: 576 WVLENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMS 752
           +V E ++L FLEERDE++LS+R++ L KSNKV  A +L+ SM   G+QP+ HA NSL++
Sbjct: 127 FVHEGSRLHFLEERDEEILSRRLINLSKSNKVRSATELFDSMRASGLQPNAHACNSLLA 185


>ref|XP_006293002.1| hypothetical protein CARUB_v10019279mg [Capsella rubella]
           gi|482561709|gb|EOA25900.1| hypothetical protein
           CARUB_v10019279mg [Capsella rubella]
          Length = 560

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 528 GEGTSSVSSNHSERPTWVLENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEV 707
           G G      N  E    V  N ++ FLEER+E+MLS+R++ L + +KV  AL+L+ SM  
Sbjct: 97  GHGLRERGENGLEEKPVVYRN-RIHFLEERNEEMLSRRLLKLSRLDKVRSALELFDSMRF 155

Query: 708 IGVQPSPHASNSLMSCL 758
           +G+QPS H+ NS +SCL
Sbjct: 156 MGLQPSAHSCNSFLSCL 172


>ref|XP_007214950.1| hypothetical protein PRUPE_ppa003127mg [Prunus persica]
           gi|462411100|gb|EMJ16149.1| hypothetical protein
           PRUPE_ppa003127mg [Prunus persica]
          Length = 601

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +3

Query: 417 RTTKREVGTD--FHERTKVPPWG--ICDEEIQNDHNSIALQGEGTSSVSSNHSERPTWVL 584
           +  +RE G +  F ++T +PPWG    DE++  +   + +Q E      ++        L
Sbjct: 89  KVVQREGGYEASFVKQT-LPPWGELAIDEDLDFEPE-VPIQPESCLKRKAS--------L 138

Query: 585 ENTKLQFLEERDEKMLSKRIMGLCKSNKVTGALQLYMSMEVIGVQPSPHASNSLMSCL 758
              ++ FLEE DE  LSKRI+ L ++NK   AL+L+ SME+ G+ P+ HA NSL+SCL
Sbjct: 139 NVNRVSFLEEMDEGTLSKRILVLSRTNKTRSALELFTSMELSGLLPNLHACNSLLSCL 196