BLASTX nr result
ID: Cocculus23_contig00021846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00021846
(399 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ... 82 8e-14
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent... 81 1e-13
ref|XP_007218958.1| hypothetical protein PRUPE_ppa003553mg [Prun... 79 5e-13
ref|XP_007010194.1| P-loop containing nucleoside triphosphate hy... 76 5e-12
ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent... 75 9e-12
ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 1e-11
ref|XP_006436687.1| hypothetical protein CICLE_v10033771mg, part... 75 1e-11
ref|XP_007145518.1| hypothetical protein PHAVU_007G245100g [Phas... 74 2e-11
ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent... 74 3e-11
ref|XP_004977524.1| PREDICTED: ATP-dependent RNA helicase DBP3-l... 73 5e-11
ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Popu... 72 1e-10
ref|XP_006409889.1| hypothetical protein EUTSA_v10016555mg [Eutr... 70 2e-10
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag... 69 9e-10
ref|XP_006851750.1| hypothetical protein AMTR_s00040p00223590 [A... 68 1e-09
ref|XP_002879168.1| ATP binding protein [Arabidopsis lyrata subs... 68 1e-09
tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays] 67 3e-09
ref|NP_001150848.1| ATP-dependent RNA helicase [Zea mays] gi|195... 67 3e-09
ref|XP_002441826.1| hypothetical protein SORBIDRAFT_08g002960 [S... 65 1e-08
ref|XP_003577892.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 2e-08
ref|XP_006296151.1| hypothetical protein CARUB_v10025303mg [Caps... 64 3e-08
>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 493
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/91 (46%), Positives = 62/91 (68%)
Frame = +1
Query: 22 KAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEE 201
K +VSV + E D+G +EI+I+ +F SID Y++ILT+MAR + HG+LHS + +E+
Sbjct: 402 KPVVSVINAEHIST-ADLGVYEIIILPNFVLSIDNYIQILTRMARHTTHGILHSFMTEED 460
Query: 202 APLTERLIEILQECGQIVPHILRDYNSTSAL 294
A L LIEIL++CGQ VP LR + S++
Sbjct: 461 ALLAGPLIEILEQCGQAVPETLRTLHLRSSM 491
>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Glycine max]
Length = 563
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 22 KAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEE 201
+A VS+ D+ DIG +++V++ F SID YV ILTKMAR SV+GVLHS + + +
Sbjct: 471 RAAVSLIDLVQIST-TDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKRD 529
Query: 202 APLTERLIEILQECGQIVPHILRDYNSTS 288
L LI +L++CGQ VP L+D N TS
Sbjct: 530 TELAAPLIAVLEQCGQEVPQTLQDLNHTS 558
>ref|XP_007218958.1| hypothetical protein PRUPE_ppa003553mg [Prunus persica]
gi|462415420|gb|EMJ20157.1| hypothetical protein
PRUPE_ppa003553mg [Prunus persica]
Length = 566
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/80 (52%), Positives = 58/80 (72%)
Frame = +1
Query: 31 VSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPL 210
VS+ DI+ G ++GE+E+VII D SI+ YV+ILT+MAR +V+GVLHSL +E+A L
Sbjct: 483 VSMIDIDQIGT-TELGEYEVVIIPDMTLSIEGYVQILTRMARYTVNGVLHSLFTREDAEL 541
Query: 211 TERLIEILQECGQIVPHILR 270
L +IL++CGQ VP LR
Sbjct: 542 AGPLTKILEQCGQAVPDALR 561
>ref|XP_007010194.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein, putative isoform 1 [Theobroma cacao]
gi|508727107|gb|EOY19004.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 578
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/68 (52%), Positives = 53/68 (77%)
Frame = +1
Query: 70 DIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPLTERLIEILQECGQ 249
D+GE+ +VI+ DF SID YV+IL++MAR++V+GVLHS + +++A LIEIL++CGQ
Sbjct: 503 DLGEYGVVILPDFVLSIDDYVQILSRMARQTVNGVLHSFLTEDDAQHAGPLIEILEKCGQ 562
Query: 250 IVPHILRD 273
VP LR+
Sbjct: 563 AVPEALRN 570
>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cucumis sativus] gi|449517699|ref|XP_004165882.1|
PREDICTED: pre-mRNA-processing ATP-dependent RNA
helicase prp5-like [Cucumis sativus]
Length = 562
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/100 (41%), Positives = 61/100 (61%)
Frame = +1
Query: 1 LKAAFSEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLH 180
LK + +V+ DIE + +D+G +E + I+ ID YV ILT MAR + +GVLH
Sbjct: 463 LKVDGKLRPVVAKTDIEQI-NTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLH 521
Query: 181 SLVCQEEAPLTERLIEILQECGQIVPHILRDYNSTSALEH 300
S + +EEA + L+EIL++CGQ VP +R+ + T A H
Sbjct: 522 SFISKEEASVAGSLVEILEQCGQDVPKTVRNLSLTQATSH 561
>ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Citrus
sinensis]
Length = 573
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +1
Query: 19 EKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQE 198
+K +S A++E E+E+VI+ DF S+ YV ILT MAR +V G+LHS ++
Sbjct: 489 DKDHISTAELE---------EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
Query: 199 EAPLTERLIEILQECGQIVPHILRDYNSTSAL 294
+A ++IEIL++CGQ+VP LRD TS +
Sbjct: 540 DAAHAGQMIEILEQCGQVVPDALRDLYHTSPM 571
>ref|XP_006436687.1| hypothetical protein CICLE_v10033771mg, partial [Citrus clementina]
gi|557538883|gb|ESR49927.1| hypothetical protein
CICLE_v10033771mg, partial [Citrus clementina]
Length = 157
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +1
Query: 19 EKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQE 198
+K +S A++E E+E+VI+ DF S+ YV ILT MAR +V G+LHS ++
Sbjct: 73 DKDHISTAELE---------EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 123
Query: 199 EAPLTERLIEILQECGQIVPHILRDYNSTSAL 294
+A ++IEIL++CGQ+VP LRD TS +
Sbjct: 124 DAAHAGQMIEILEQCGQVVPDALRDLYHTSPM 155
>ref|XP_007145518.1| hypothetical protein PHAVU_007G245100g [Phaseolus vulgaris]
gi|561018708|gb|ESW17512.1| hypothetical protein
PHAVU_007G245100g [Phaseolus vulgaris]
Length = 564
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 70 DIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPLTERLIEILQECGQ 249
DIG ++ VI+ +F SID YV ILTKMAR+SV+GVL+S + + + L LI +L++CGQ
Sbjct: 487 DIGTYDAVILPNFVPSIDTYVHILTKMARQSVNGVLYSFLTKRDTELASPLITVLEQCGQ 546
Query: 250 IVPHILRDYNSTS 288
VP L+D + +S
Sbjct: 547 EVPQSLQDLHHSS 559
>ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cicer arietinum]
Length = 544
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +1
Query: 16 SEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQ 195
S + +VS+ D+E +VDIG ++I+++ F S+D YV ILT MAR+SV+GVL+ + +
Sbjct: 450 SNRRLVSMIDLEDVV-KVDIGMYDIIVLPSFVPSMDTYVHILTNMARQSVNGVLYGFLTK 508
Query: 196 EEAPLTERLIEILQECGQIVPHILRDYNSTS 288
+ L LI IL++CGQ VP L++ + S
Sbjct: 509 RDTELAGPLISILEQCGQEVPDTLQNLHQES 539
>ref|XP_004977524.1| PREDICTED: ATP-dependent RNA helicase DBP3-like [Setaria italica]
Length = 528
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 70 DIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPLTERLIEILQECGQ 249
D+ FE V++VDFP S+D YV ILT +AR ++ G +HS+ C +AP+ + L E+L C Q
Sbjct: 457 DVEGFETVLVVDFPPSVDEYVDILTGVARHTIGGEVHSIFCNTDAPVAKPLAELLANCSQ 516
Query: 250 IVPHILRDYNST 285
+VP L+ S+
Sbjct: 517 VVPEFLKKLESS 528
>ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Populus trichocarpa]
gi|550330484|gb|EEF01527.2| hypothetical protein
POPTR_0010s24020g [Populus trichocarpa]
Length = 491
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +1
Query: 22 KAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEE 201
K +VSV ++E ++ +E VI+ +F SID YV+ILT+MAR S+ G HS + +E+
Sbjct: 399 KPVVSVINVERIST-TNLAFYETVILPNFVPSIDNYVQILTRMARHSIKGNFHSFLTKED 457
Query: 202 APLTERLIEILQECGQIVPHILRDYNSTSAL 294
A + L+ IL++CGQ VP LR+ + TS++
Sbjct: 458 ALIARPLMGILEQCGQAVPEALRNLHLTSSV 488
>ref|XP_006409889.1| hypothetical protein EUTSA_v10016555mg [Eutrema salsugineum]
gi|557111058|gb|ESQ51342.1| hypothetical protein
EUTSA_v10016555mg [Eutrema salsugineum]
Length = 499
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = +1
Query: 16 SEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQ 195
S K + + DIE D + +FE V++ DF S + YV+ILT MAR SVHGVLHS + +
Sbjct: 405 SRKPLARLIDIEEL-DITVMSDFETVLLPDFVPSFETYVQILTSMARDSVHGVLHSFLTE 463
Query: 196 EEAPL--TERLIEILQECGQIVPHILRDYNSTS 288
+EA L+ +L++CGQIVP R+ ++S
Sbjct: 464 KEAVSYPAGSLVNVLEDCGQIVPEPWRNMYASS 496
>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 532
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/91 (36%), Positives = 56/91 (61%)
Frame = +1
Query: 16 SEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQ 195
S + +V++ D+E +DIG ++++++ S+D Y ILT MAR+SV+G+LH + +
Sbjct: 435 SNRRLVTMIDLEDIST-LDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLTK 493
Query: 196 EEAPLTERLIEILQECGQIVPHILRDYNSTS 288
+ LI IL++CGQ VP L+D + S
Sbjct: 494 SDTEHAGPLISILEQCGQEVPETLKDLHQAS 524
>ref|XP_006851750.1| hypothetical protein AMTR_s00040p00223590 [Amborella trichopoda]
gi|548855330|gb|ERN13217.1| hypothetical protein
AMTR_s00040p00223590 [Amborella trichopoda]
Length = 566
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 16 SEKAMV-SVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVC 192
SEK +V SV D ++ G DIG F+ + DFP+SI+ YV IL+KM + GV++SL
Sbjct: 469 SEKGVVVSVTDKDSIGRTEDIGVFQTIFFYDFPSSIEEYVEILSKMETHLIKGVIYSLCS 528
Query: 193 QEEAPLTERLIEILQECGQIVPHILR 270
+APL + LI+++++ Q VP L+
Sbjct: 529 GVDAPLAKPLIKVMEQHAQPVPETLK 554
>ref|XP_002879168.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297325007|gb|EFH55427.1| ATP binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 SEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQ 195
S K + + DIE D + +FE V++ DF SI++Y +ILT MAR SVHGVLHS + +
Sbjct: 412 SRKPVAHLIDIEQL-DTTVMRDFETVLLPDFFPSIEIYTQILTSMARESVHGVLHSFITE 470
Query: 196 EEAPLTER--LIEILQECGQIVP 258
+EA L+ IL++CGQ +P
Sbjct: 471 KEAASYRAGPLVTILEDCGQNIP 493
>tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays]
Length = 525
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/89 (35%), Positives = 52/89 (58%)
Frame = +1
Query: 19 EKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQE 198
++ +SV D+EA FE V++VD P S+D Y+ ILT A + G +HS+ C
Sbjct: 446 DRENMSVTDVEA---------FETVLVVDLPPSVDEYIEILTGAALHVIGGEVHSIFCNT 496
Query: 199 EAPLTERLIEILQECGQIVPHILRDYNST 285
+A + + L ++L +CGQ+VP L+ S+
Sbjct: 497 DASVAKPLAQLLADCGQVVPEFLKSLKSS 525
>ref|NP_001150848.1| ATP-dependent RNA helicase [Zea mays] gi|195642358|gb|ACG40647.1|
ATP-dependent RNA helicase [Zea mays]
Length = 525
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/89 (35%), Positives = 52/89 (58%)
Frame = +1
Query: 19 EKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQE 198
++ +SV D+EA FE V++VD P S+D Y+ ILT A + G +HS+ C
Sbjct: 446 DRENMSVTDVEA---------FETVLVVDLPPSVDEYIEILTGAALHVIGGEVHSIFCNT 496
Query: 199 EAPLTERLIEILQECGQIVPHILRDYNST 285
+A + + L ++L +CGQ+VP L+ S+
Sbjct: 497 DASVAKPLAQLLADCGQVVPEFLKSLKSS 525
>ref|XP_002441826.1| hypothetical protein SORBIDRAFT_08g002960 [Sorghum bicolor]
gi|241942519|gb|EES15664.1| hypothetical protein
SORBIDRAFT_08g002960 [Sorghum bicolor]
Length = 529
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +1
Query: 70 DIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPLTERLIEILQECGQ 249
D EFE V++VD P S+D YV ILT +A + G +HS+ C +A + + L E+L +C Q
Sbjct: 458 DAEEFETVLVVDLPPSVDEYVEILTGVALHVIGGEVHSIFCNADASIAKPLAELLADCRQ 517
Query: 250 IVPHILRDYNST 285
+VP ++ S+
Sbjct: 518 VVPEFFKNLESS 529
>ref|XP_003577892.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Brachypodium
distachyon]
Length = 521
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 70 DIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQEEAPLTERLIEILQECGQ 249
DI EFEIV++ D P SID Y I++ M+R +V G +H + ++A L + L ++L +CGQ
Sbjct: 451 DIEEFEIVVVSDLPRSIDDYKEIISGMSRHAVSGEVHVIFSNDDAALADPLADVLSKCGQ 510
Query: 250 IVPHILR 270
+VP +R
Sbjct: 511 MVPKFVR 517
>ref|XP_006296151.1| hypothetical protein CARUB_v10025303mg [Capsella rubella]
gi|482564859|gb|EOA29049.1| hypothetical protein
CARUB_v10025303mg [Capsella rubella]
Length = 486
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 SEKAMVSVADIEAAGDQVDIGEFEIVIIVDFPASIDLYVRILTKMARRSVHGVLHSLVCQ 195
S K + + DIE D + +FE V++ DF SI++Y +ILT MAR SVHG L S + +
Sbjct: 393 SRKPLAHLIDIEQL-DTTVMKDFETVLLPDFFPSIEIYTQILTSMARESVHGELQSFITE 451
Query: 196 EEAP--LTERLIEILQECGQIVP 258
++A E L+ +L++CGQ VP
Sbjct: 452 KDAVSYQAEPLVSLLEDCGQNVP 474