BLASTX nr result
ID: Cocculus23_contig00021813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00021813
(242 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Popu... 104 1e-20
ref|XP_007014039.1| RING/U-box superfamily protein, putative iso... 103 2e-20
ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Th... 103 2e-20
ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|101778... 102 4e-20
ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Caps... 102 7e-20
ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prun... 102 7e-20
ref|XP_002525456.1| zinc finger protein, putative [Ricinus commu... 102 7e-20
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 101 1e-19
ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [A... 101 1e-19
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra... 101 1e-19
gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 100 2e-19
ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citr... 100 2e-19
ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arab... 100 2e-19
ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutr... 99 5e-19
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu... 99 6e-19
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 98 1e-18
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 97 2e-18
ref|XP_007030174.1| RING/U-box superfamily protein, putative [Th... 97 2e-18
ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250... 95 9e-18
emb|CBI16568.3| unnamed protein product [Vitis vinifera] 95 1e-17
>ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Populus trichocarpa]
gi|550346456|gb|EEE82420.2| hypothetical protein
POPTR_0001s03880g [Populus trichocarpa]
Length = 382
Score = 104 bits (260), Expect = 1e-20
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRERA 47
M +A+ ARYWC+MCSQMV+PVMEVEIKCPFC+SGF+EEM D ++ GSD RA
Sbjct: 1 MEEAMAARYWCYMCSQMVNPVMEVEIKCPFCQSGFIEEMSSSTGDTQVPDSEFGSD--RA 58
Query: 46 LSLWAPILLGMMG 8
LSLWAPILLGMMG
Sbjct: 59 LSLWAPILLGMMG 71
>ref|XP_007014039.1| RING/U-box superfamily protein, putative isoform 5, partial
[Theobroma cacao] gi|508784402|gb|EOY31658.1| RING/U-box
superfamily protein, putative isoform 5, partial
[Theobroma cacao]
Length = 310
Score = 103 bits (257), Expect = 2e-20
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRERA 47
M +A+ ARYWCH CS++V+P+MEVEIKCP CE+GF+EEM G D +D+GSD RA
Sbjct: 1 MEEAMAARYWCHQCSRIVNPIMEVEIKCPVCETGFIEEMSSGTRDSEDIDSDIGSD--RA 58
Query: 46 LSLWAPILLGMMG 8
LSLWAPILLGMMG
Sbjct: 59 LSLWAPILLGMMG 71
>ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|590580324|ref|XP_007014036.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580327|ref|XP_007014037.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580331|ref|XP_007014038.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784398|gb|EOY31654.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784399|gb|EOY31655.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784400|gb|EOY31656.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784401|gb|EOY31657.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 367
Score = 103 bits (257), Expect = 2e-20
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRERA 47
M +A+ ARYWCH CS++V+P+MEVEIKCP CE+GF+EEM G D +D+GSD RA
Sbjct: 1 MEEAMAARYWCHQCSRIVNPIMEVEIKCPVCETGFIEEMSSGTRDSEDIDSDIGSD--RA 58
Query: 46 LSLWAPILLGMMG 8
LSLWAPILLGMMG
Sbjct: 59 LSLWAPILLGMMG 71
>ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|10177832|dbj|BAB11261.1|
unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis
thaliana] gi|20259581|gb|AAM14133.1| unknown protein
[Arabidopsis thaliana] gi|332009368|gb|AED96751.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 396
Score = 102 bits (255), Expect = 4e-20
Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 11/80 (13%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMD------GGRA-----DHHTD 71
M + + ARYWCHMCSQMV+PVME EIKCPFC+SGF+EEM GGR D TD
Sbjct: 1 MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDSETD 60
Query: 70 LGSDRERALSLWAPILLGMM 11
G+D RALSLWAPILLGMM
Sbjct: 61 FGTD--RALSLWAPILLGMM 78
>ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Capsella rubella]
gi|482548195|gb|EOA12389.1| hypothetical protein
CARUB_v10026533mg [Capsella rubella]
Length = 399
Score = 102 bits (253), Expect = 7e-20
Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 13/82 (15%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMD--------GGRA-----DHH 77
M + + ARYWCHMCSQMV+P+ME EIKCPFC+SGF+EEM GGR D
Sbjct: 1 MDETMAARYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNGNGGGGGGRGIRDVQDSE 60
Query: 76 TDLGSDRERALSLWAPILLGMM 11
TD G+D RALSLWAPILLGMM
Sbjct: 61 TDFGTD--RALSLWAPILLGMM 80
>ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prunus persica]
gi|462401025|gb|EMJ06582.1| hypothetical protein
PRUPE_ppa007335mg [Prunus persica]
Length = 372
Score = 102 bits (253), Expect = 7e-20
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Frame = -2
Query: 199 ARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRERALSLWAP 29
ARYWCH+CSQMV P+MEVE+KCPFC+SGF+EEM+ D H +D GSD RALSLWAP
Sbjct: 4 ARYWCHVCSQMVDPIMEVEMKCPFCQSGFIEEMNSNTRDSHEADSDFGSD--RALSLWAP 61
Query: 28 ILLGMM 11
ILLGMM
Sbjct: 62 ILLGMM 67
>ref|XP_002525456.1| zinc finger protein, putative [Ricinus communis]
gi|223535269|gb|EEF36946.1| zinc finger protein,
putative [Ricinus communis]
Length = 348
Score = 102 bits (253), Expect = 7e-20
Identities = 45/71 (63%), Positives = 55/71 (77%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHHTDLGSDRERALSL 38
MGD +V RYWCHMCS+MV+PVME EIKCP CE+GFVEE+ R ++ + ERA S+
Sbjct: 1 MGDEMVDRYWCHMCSRMVTPVMEAEIKCPLCENGFVEEIGSTRDLNNNGIDFVSERAFSM 60
Query: 37 WAPILLGMMGG 5
WAPILLG+MGG
Sbjct: 61 WAPILLGLMGG 71
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 101 bits (251), Expect = 1e-19
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Frame = -2
Query: 223 GEMGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRE 53
GE G + ARYWCHMCSQMV+P+M VEIKCPFC++GF+E+M D+ ++ GSD
Sbjct: 7 GEGGQTMAARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDMIDSTGDNQVPDSEFGSD-- 64
Query: 52 RALSLWAPILLGMMG 8
RALSLWAP+LLGM+G
Sbjct: 65 RALSLWAPVLLGMVG 79
>ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [Amborella trichopoda]
gi|548835405|gb|ERM97240.1| hypothetical protein
AMTR_s00119p00089020 [Amborella trichopoda]
Length = 337
Score = 101 bits (251), Expect = 1e-19
Identities = 48/70 (68%), Positives = 57/70 (81%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHHTDLGSDRERALSL 38
MGD+LVARYWCH CSQ+V+P+ME EIKCPFCE GFVEE+ GG + + + +RALSL
Sbjct: 1 MGDSLVARYWCHRCSQVVNPIME-EIKCPFCEDGFVEEI-GGEGEREQEDEAVSDRALSL 58
Query: 37 WAPILLGMMG 8
WAPILLGMMG
Sbjct: 59 WAPILLGMMG 68
>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 101 bits (251), Expect = 1e-19
Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 11/80 (13%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMD------GGRA-----DHHTD 71
M + + +RYWCHMCSQMV+P+ME EIKCPFC+SGF+EEM GGR D TD
Sbjct: 1 MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETD 60
Query: 70 LGSDRERALSLWAPILLGMM 11
G+D RALSLWAPILLGMM
Sbjct: 61 FGTD--RALSLWAPILLGMM 78
>gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 381
Score = 100 bits (249), Expect = 2e-19
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 12/82 (14%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEM------------DGGRADHHT 74
M + + +RYWCHMCSQ V+P+MEVEIKCPFC+SGFVEEM +GGR +
Sbjct: 1 MEETIASRYWCHMCSQEVNPIMEVEIKCPFCQSGFVEEMSSIDSSNNNPNPEGGRNADFS 60
Query: 73 DLGSDRERALSLWAPILLGMMG 8
D +RALSLWAPILLGMMG
Sbjct: 61 DSDFGSDRALSLWAPILLGMMG 82
>ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citrus clementina]
gi|568871578|ref|XP_006488959.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Citrus sinensis]
gi|557548167|gb|ESR58796.1| hypothetical protein
CICLE_v10015642mg [Citrus clementina]
Length = 375
Score = 100 bits (249), Expect = 2e-19
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 6/76 (7%)
Frame = -2
Query: 217 MGDALVA-RYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH-----TDLGSDR 56
M D + A RYWCHMCSQ+V P+MEVEIKCPFC+SGFVEEM G +++ ++ GSD
Sbjct: 1 MDDGVAASRYWCHMCSQIVDPIMEVEIKCPFCQSGFVEEMGSGSNNNNHQVPDSEFGSD- 59
Query: 55 ERALSLWAPILLGMMG 8
RALSLWAPILLGMMG
Sbjct: 60 -RALSLWAPILLGMMG 74
>ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp.
lyrata] gi|297308041|gb|EFH38751.1| hypothetical protein
ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 100 bits (249), Expect = 2e-19
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 11/76 (14%)
Frame = -2
Query: 205 LVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMD------GGRA-----DHHTDLGSD 59
+ ARYWCHMCSQMV+P+ME EIKCPFC+SGF+EEM GGR D TD G+D
Sbjct: 1 MAARYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETDFGTD 60
Query: 58 RERALSLWAPILLGMM 11
RALSLWAPILLGMM
Sbjct: 61 --RALSLWAPILLGMM 74
>ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutrema salsugineum]
gi|557102434|gb|ESQ42797.1| hypothetical protein
EUTSA_v10013831mg [Eutrema salsugineum]
Length = 378
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/78 (61%), Positives = 55/78 (70%), Gaps = 9/78 (11%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRA---------DHHTDLG 65
M + + ARYWCHMCSQMV+P+ME EIKCPFC+SGFVEEM G D TD G
Sbjct: 1 MEETMAARYWCHMCSQMVNPIMESEIKCPFCQSGFVEEMSGNGVGGGSIRDVQDPETDFG 60
Query: 64 SDRERALSLWAPILLGMM 11
+ E A+SLWAPILLGMM
Sbjct: 61 T--EHAMSLWAPILLGMM 76
>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein,
putative [Ricinus communis]
Length = 394
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHH---TDLGSDRERA 47
M +AL ARYWC++CSQMV+P+ME EIKCPFC GFVEEM D+ +D SD RA
Sbjct: 1 MEEALAARYWCYLCSQMVNPIMEAEIKCPFCLGGFVEEMSSNTRDNQEPDSDFSSD--RA 58
Query: 46 LSLWAPILLGMMG 8
LSLWAP+LLGMMG
Sbjct: 59 LSLWAPVLLGMMG 71
>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470117588|ref|XP_004294936.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 375
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADH-HTDLGSDRERALS 41
M +A+ ARYWCHMCSQMV+P+M E+KCPFC+SGF+EEMDG D+ D +R LS
Sbjct: 1 MEEAIAARYWCHMCSQMVNPIMGEEMKCPFCQSGFIEEMDGTPRDNPEADSEFGPDRPLS 60
Query: 40 LWAPILLGMM 11
LWAPIL+GMM
Sbjct: 61 LWAPILMGMM 70
>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449519040|ref|XP_004166543.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 362
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 12/82 (14%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHHTD----------L 68
M + + RYWCHMCSQMV+P+++VEIKCPFC SGFVEE+ G + + D L
Sbjct: 1 MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL 60
Query: 67 GSD--RERALSLWAPILLGMMG 8
SD ERALSLWAPILLGMMG
Sbjct: 61 ESDFGSERALSLWAPILLGMMG 82
>ref|XP_007030174.1| RING/U-box superfamily protein, putative [Theobroma cacao]
gi|508718779|gb|EOY10676.1| RING/U-box superfamily
protein, putative [Theobroma cacao]
Length = 348
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRA---DHHTDLGSDRERA 47
MGD +V RYWC+MCSQMV+P +E E KCPFCE+GFVEEM R D+ DLGS
Sbjct: 1 MGDRMVGRYWCYMCSQMVNPTIEPETKCPFCETGFVEEMTSMRQYSNDNGVDLGS--MNT 58
Query: 46 LSLWAPILLGMMGG 5
LSLWAPILLG++GG
Sbjct: 59 LSLWAPILLGLIGG 72
>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
uncharacterized protein LOC100250148 isoform 2 [Vitis
vinifera]
Length = 368
Score = 95.1 bits (235), Expect = 9e-18
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHHTDLGSD--RERAL 44
M DA+ RYWCH CSQ+V+P+ E E KCP C+ GF+E++DG + H D SD +R L
Sbjct: 1 MEDAMGGRYWCHSCSQVVNPIAEAEPKCPLCQDGFIEDIDGTASRDHNDSDSDLASDRTL 60
Query: 43 SLWAPILLGMMG 8
SLWAPILLGMMG
Sbjct: 61 SLWAPILLGMMG 72
>emb|CBI16568.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = -2
Query: 217 MGDALVARYWCHMCSQMVSPVMEVEIKCPFCESGFVEEMDGGRADHHTDLGSD--RERAL 44
M DA+ RYWCH CSQ+V+P+ E E KCP C+ GF+E++DG + H D SD +R L
Sbjct: 1 MEDAMGGRYWCHSCSQVVNPIAEAEPKCPLCQDGFIEDIDGTASRDHNDSDSDLASDRTL 60
Query: 43 SLWAPILLGMMGG 5
SLWAPILLGMM G
Sbjct: 61 SLWAPILLGMMDG 73