BLASTX nr result

ID: Cocculus23_contig00021531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00021531
         (360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551304.1| PREDICTED: phosphomethylpyrimidine synthase,...    52   4e-06
ref|XP_006602098.1| PREDICTED: phosphomethylpyrimidine synthase,...    52   4e-06

>ref|XP_003551304.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
           isoform X1 [Glycine max]
          Length = 647

 Score = 51.6 bits (122), Expect(2) = 4e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +2

Query: 233 SKLLNTSFLPGFDVVGNVSGAREKEASPIPLSFIPRATATFE 358
           SK  ++SFLPGFDVVG  S A +KE  P  +S +PRAT TF+
Sbjct: 22  SKFTSSSFLPGFDVVGRASNAWKKELVPSSISLVPRATLTFD 63



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +3

Query: 156 MASINSALTTVVCKKSNY 209
           MAS+++ +T+VVCK  N+
Sbjct: 1   MASLHANVTSVVCKSGNH 18


>ref|XP_006602098.1| PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like
           isoform X2 [Glycine max]
          Length = 646

 Score = 51.6 bits (122), Expect(2) = 4e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +2

Query: 233 SKLLNTSFLPGFDVVGNVSGAREKEASPIPLSFIPRATATFE 358
           SK  ++SFLPGFDVVG  S A +KE  P  +S +PRAT TF+
Sbjct: 22  SKFTSSSFLPGFDVVGRASNAWKKELVPSSISLVPRATLTFD 63



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +3

Query: 156 MASINSALTTVVCKKSNY 209
           MAS+++ +T+VVCK  N+
Sbjct: 1   MASLHANVTSVVCKSGNH 18


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