BLASTX nr result
ID: Cocculus23_contig00021413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00021413
(201 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007209461.1| hypothetical protein PRUPE_ppa009853mg [Prun... 127 1e-27
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ... 127 1e-27
emb|CBI17573.3| unnamed protein product [Vitis vinifera] 125 8e-27
ref|XP_006356508.1| PREDICTED: uncharacterized protein LOC102599... 124 1e-26
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ... 124 2e-26
ref|XP_004298757.1| PREDICTED: general transcription factor IIE ... 123 2e-26
ref|XP_002509755.1| Transcription initiation factor IIE subunit ... 123 3e-26
ref|XP_006440584.1| hypothetical protein CICLE_v10021533mg [Citr... 122 4e-26
ref|XP_002299546.1| transcription initiation factor-related fami... 122 5e-26
gb|EYU29730.1| hypothetical protein MIMGU_mgv1a011317mg [Mimulus... 119 3e-25
gb|EYU39894.1| hypothetical protein MIMGU_mgv1a0095231mg, partia... 119 6e-25
gb|EPS67610.1| hypothetical protein M569_07158, partial [Genlise... 118 8e-25
gb|EXB38823.1| Transcription initiation factor IIE subunit beta ... 116 3e-24
ref|XP_007040168.1| Transcription initiation factor IIE subunit ... 116 3e-24
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ... 116 3e-24
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ... 114 2e-23
gb|ACU19614.1| unknown [Glycine max] 114 2e-23
ref|XP_007160034.1| hypothetical protein PHAVU_002G287100g [Phas... 113 3e-23
ref|XP_004241910.1| PREDICTED: uncharacterized protein LOC101250... 113 3e-23
ref|XP_002867886.1| hypothetical protein ARALYDRAFT_492835 [Arab... 113 3e-23
>ref|XP_007209461.1| hypothetical protein PRUPE_ppa009853mg [Prunus persica]
gi|595848123|ref|XP_007209462.1| hypothetical protein
PRUPE_ppa009853mg [Prunus persica]
gi|462405196|gb|EMJ10660.1| hypothetical protein
PRUPE_ppa009853mg [Prunus persica]
gi|462405197|gb|EMJ10661.1| hypothetical protein
PRUPE_ppa009853mg [Prunus persica]
Length = 274
Score = 127 bits (320), Expect = 1e-27
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRK PVGAQIKRVIDLLLETRQAFTPEQINE CYVDANANKAVFD
Sbjct: 47 VKFSNDTERLQHINSIRKGPVGAQIKRVIDLLLETRQAFTPEQINEACYVDANANKAVFD 106
Query: 186 SLRNN 200
SLRNN
Sbjct: 107 SLRNN 111
>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
product [Vitis vinifera]
Length = 285
Score = 127 bits (320), Expect = 1e-27
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINE CYVD NANKAVFD
Sbjct: 52 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFD 111
Query: 186 SLRNN 200
SLRNN
Sbjct: 112 SLRNN 116
>emb|CBI17573.3| unnamed protein product [Vitis vinifera]
Length = 178
Score = 125 bits (313), Expect = 8e-27
Identities = 62/65 (95%), Positives = 62/65 (95%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINE CYVD ANKAVFD
Sbjct: 52 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDMTANKAVFD 111
Query: 186 SLRNN 200
SLRNN
Sbjct: 112 SLRNN 116
>ref|XP_006356508.1| PREDICTED: uncharacterized protein LOC102599084 [Solanum tuberosum]
Length = 273
Score = 124 bits (311), Expect = 1e-26
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRK PVGAQIKRVIDLLLETRQAFTPEQINE CYVD N NKAVFD
Sbjct: 48 VKFSNDTERLQHINSIRKGPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINGNKAVFD 107
Query: 186 SLRNN 200
SLRNN
Sbjct: 108 SLRNN 112
>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
general transcription factor IIE subunit 2-like [Cucumis
sativus]
Length = 277
Score = 124 bits (310), Expect = 2e-26
Identities = 60/65 (92%), Positives = 63/65 (96%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRK+PVGAQIKRVIDLLLETRQAFTPEQINE CYVD N+NKAV+D
Sbjct: 53 VKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYD 112
Query: 186 SLRNN 200
SLRNN
Sbjct: 113 SLRNN 117
>ref|XP_004298757.1| PREDICTED: general transcription factor IIE subunit 2-like
[Fragaria vesca subsp. vesca]
Length = 277
Score = 123 bits (309), Expect = 2e-26
Identities = 61/65 (93%), Positives = 61/65 (93%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRK PVGAQIKRVIDLLLETRQAFTPE INE CYVD NANKAVFD
Sbjct: 48 VKFSNDTERLQHINSIRKGPVGAQIKRVIDLLLETRQAFTPELINEACYVDVNANKAVFD 107
Query: 186 SLRNN 200
SLRNN
Sbjct: 108 SLRNN 112
>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
communis] gi|223549654|gb|EEF51142.1| Transcription
initiation factor IIE subunit beta, putative [Ricinus
communis]
Length = 282
Score = 123 bits (308), Expect = 3e-26
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHI+SIRKAPVGAQIKRVIDLL ETRQAFTPEQINE CYVD N+NKAVFD
Sbjct: 54 VKFSNDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFD 113
Query: 186 SLRNN 200
SLRNN
Sbjct: 114 SLRNN 118
>ref|XP_006440584.1| hypothetical protein CICLE_v10021533mg [Citrus clementina]
gi|567896194|ref|XP_006440585.1| hypothetical protein
CICLE_v10021533mg [Citrus clementina]
gi|568847222|ref|XP_006477437.1| PREDICTED: general
transcription factor IIE subunit 2-like isoform X1
[Citrus sinensis] gi|568847224|ref|XP_006477438.1|
PREDICTED: general transcription factor IIE subunit
2-like isoform X2 [Citrus sinensis]
gi|568847226|ref|XP_006477439.1| PREDICTED: general
transcription factor IIE subunit 2-like isoform X3
[Citrus sinensis] gi|568847228|ref|XP_006477440.1|
PREDICTED: general transcription factor IIE subunit
2-like isoform X4 [Citrus sinensis]
gi|568847230|ref|XP_006477441.1| PREDICTED: general
transcription factor IIE subunit 2-like isoform X5
[Citrus sinensis] gi|557542846|gb|ESR53824.1|
hypothetical protein CICLE_v10021533mg [Citrus
clementina] gi|557542847|gb|ESR53825.1| hypothetical
protein CICLE_v10021533mg [Citrus clementina]
Length = 283
Score = 122 bits (307), Expect = 4e-26
Identities = 60/66 (90%), Positives = 62/66 (93%)
Frame = +3
Query: 3 PVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVF 182
PVKFSNDTERLQHINSIRK+PVGAQIKRVID LLETRQAFTPE+IN CYVD NANKAVF
Sbjct: 53 PVKFSNDTERLQHINSIRKSPVGAQIKRVIDRLLETRQAFTPEEINRDCYVDVNANKAVF 112
Query: 183 DSLRNN 200
DSLRNN
Sbjct: 113 DSLRNN 118
>ref|XP_002299546.1| transcription initiation factor-related family protein [Populus
trichocarpa] gi|222846804|gb|EEE84351.1| transcription
initiation factor-related family protein [Populus
trichocarpa]
Length = 284
Score = 122 bits (306), Expect = 5e-26
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAP GAQIKRVIDLLLETRQAFTPEQIN+ CYVD N+NKAVFD
Sbjct: 56 VKFSNDTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFD 115
Query: 186 SLRNN 200
SLRNN
Sbjct: 116 SLRNN 120
>gb|EYU29730.1| hypothetical protein MIMGU_mgv1a011317mg [Mimulus guttatus]
Length = 285
Score = 119 bits (299), Expect = 3e-25
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQIKRVI+LL ETRQ +TPEQINE CYVD NANK+VFD
Sbjct: 54 VKFSNDTERLQHINSIRKAPVGAQIKRVINLLFETRQLYTPEQINEACYVDINANKSVFD 113
Query: 186 SLRNN 200
SLRNN
Sbjct: 114 SLRNN 118
>gb|EYU39894.1| hypothetical protein MIMGU_mgv1a0095231mg, partial [Mimulus
guttatus]
Length = 328
Score = 119 bits (297), Expect = 6e-25
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 3 PVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVF 182
P+KFSNDTERLQHINSIRKAPVGAQ+KRVIDLL E RQA TPEQINE CYVD ANKAVF
Sbjct: 96 PIKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFEKRQALTPEQINEACYVDMIANKAVF 155
Query: 183 DSLRNN 200
DSLRNN
Sbjct: 156 DSLRNN 161
>gb|EPS67610.1| hypothetical protein M569_07158, partial [Genlisea aurea]
Length = 234
Score = 118 bits (296), Expect = 8e-25
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +3
Query: 3 PVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVF 182
P+KFSNDTERLQHINS+RKAPVGAQIKRVIDLL ETRQ TP+QINE CYVD ANKAVF
Sbjct: 10 PIKFSNDTERLQHINSVRKAPVGAQIKRVIDLLYETRQTLTPDQINESCYVDVIANKAVF 69
Query: 183 DSLRNN 200
DSLRNN
Sbjct: 70 DSLRNN 75
>gb|EXB38823.1| Transcription initiation factor IIE subunit beta [Morus notabilis]
Length = 280
Score = 116 bits (291), Expect = 3e-24
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFS DTERLQHINSIRK+P GAQIKRVIDLLLETRQA TPEQINE CYVD NANK VFD
Sbjct: 52 VKFSTDTERLQHINSIRKSPAGAQIKRVIDLLLETRQALTPEQINEACYVDTNANKTVFD 111
Query: 186 SLRNN 200
SLR N
Sbjct: 112 SLRKN 116
>ref|XP_007040168.1| Transcription initiation factor IIE subunit beta [Theobroma cacao]
gi|508777413|gb|EOY24669.1| Transcription initiation
factor IIE subunit beta [Theobroma cacao]
Length = 284
Score = 116 bits (291), Expect = 3e-24
Identities = 55/66 (83%), Positives = 59/66 (89%)
Frame = +3
Query: 3 PVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVF 182
PVKFSNDTERLQHINSIRKAPVGAQ+KRVID+L +TRQAFTPEQINE CYVD N NK VF
Sbjct: 54 PVKFSNDTERLQHINSIRKAPVGAQMKRVIDILFQTRQAFTPEQINEACYVDVNGNKDVF 113
Query: 183 DSLRNN 200
+ LR N
Sbjct: 114 EGLRKN 119
>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
max]
Length = 280
Score = 116 bits (291), Expect = 3e-24
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQ+KRVIDLLLETRQAFTPEQINE CYVD ANK VF+
Sbjct: 51 VKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMKANKDVFE 110
Query: 186 SLRNN 200
+LR N
Sbjct: 111 NLRKN 115
>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2 isoform X1
[Glycine max] gi|571457155|ref|XP_006580604.1|
PREDICTED: general transcription factor IIE subunit 2
isoform X2 [Glycine max]
Length = 279
Score = 114 bits (284), Expect = 2e-23
Identities = 56/65 (86%), Positives = 59/65 (90%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQ+KRVIDLLLETRQAFTPEQIN CYVD ANK VF+
Sbjct: 50 VKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFE 109
Query: 186 SLRNN 200
+LR N
Sbjct: 110 NLRKN 114
>gb|ACU19614.1| unknown [Glycine max]
Length = 246
Score = 114 bits (284), Expect = 2e-23
Identities = 56/65 (86%), Positives = 59/65 (90%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQ+KRVIDLLLETRQAFTPEQIN CYVD ANK VF+
Sbjct: 50 VKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFE 109
Query: 186 SLRNN 200
+LR N
Sbjct: 110 NLRKN 114
>ref|XP_007160034.1| hypothetical protein PHAVU_002G287100g [Phaseolus vulgaris]
gi|593793993|ref|XP_007160035.1| hypothetical protein
PHAVU_002G287100g [Phaseolus vulgaris]
gi|561033449|gb|ESW32028.1| hypothetical protein
PHAVU_002G287100g [Phaseolus vulgaris]
gi|561033450|gb|ESW32029.1| hypothetical protein
PHAVU_002G287100g [Phaseolus vulgaris]
Length = 279
Score = 113 bits (282), Expect = 3e-23
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHINSIRKAPVGAQ+KRVIDLLLETRQA TPEQIN+ CYVD ANK VF+
Sbjct: 50 VKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQACYVDIKANKDVFE 109
Query: 186 SLRNN 200
+LR N
Sbjct: 110 NLRKN 114
>ref|XP_004241910.1| PREDICTED: uncharacterized protein LOC101250226 [Solanum
lycopersicum]
Length = 273
Score = 113 bits (282), Expect = 3e-23
Identities = 55/65 (84%), Positives = 58/65 (89%)
Frame = +3
Query: 6 VKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVFD 185
VKFSNDTERLQHIN+IRK PVG+Q+KRVIDLLLETRQAFTPEQINE CYVD NK VFD
Sbjct: 48 VKFSNDTERLQHINTIRKGPVGSQMKRVIDLLLETRQAFTPEQINEACYVDLIGNKPVFD 107
Query: 186 SLRNN 200
SLR N
Sbjct: 108 SLRKN 112
>ref|XP_002867886.1| hypothetical protein ARALYDRAFT_492835 [Arabidopsis lyrata subsp.
lyrata] gi|297313722|gb|EFH44145.1| hypothetical protein
ARALYDRAFT_492835 [Arabidopsis lyrata subsp. lyrata]
Length = 286
Score = 113 bits (282), Expect = 3e-23
Identities = 55/66 (83%), Positives = 60/66 (90%)
Frame = +3
Query: 3 PVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEVCYVDANANKAVF 182
PVKFSNDTERLQ+IN+IRKAPVGAQIKRVIDLL E R A TPEQINE+CY+D +ANKAVF
Sbjct: 53 PVKFSNDTERLQNINNIRKAPVGAQIKRVIDLLFEKRLALTPEQINELCYIDMHANKAVF 112
Query: 183 DSLRNN 200
DSLR N
Sbjct: 113 DSLRKN 118