BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00021337
         (387 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                69   5e-10
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]     69   9e-10
ref|XP_006350260.1| PREDICTED: uncharacterized protein LOC102600...    59   9e-07

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +3

Query: 144 SIYPCGVSSFENLYGRSPNY--FLILWLYMLCCSSLKKSNK*FACSALCIFLGYGHGQKG 317
           S +  G+S FE LYG  P+Y  F +            + NK  + SA+C+FLGYG G+KG
Sbjct: 682 SSHSSGLSPFEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKG 741

Query: 318 YGCYDPSAKRICRYVSFHVIFLE 386
           Y C+DP  +++  YVS HV+FLE
Sbjct: 742 YRCFDPITQKL--YVSHHVVFLE 762


>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
 Frame = +3

Query: 159 GVSSFENLYGRSPNYFLILWLYMLCCSSLK---KSNK*FACSALCIFLGYGHGQKGYGCY 329
           G+S FE LY   P+Y   L ++   C  L+   + +K  + SA+C+FLGYG GQKGY CY
Sbjct: 203 GLSPFEKLYASVPDYSS-LKVFGSTCFVLRPQVERSKLSSRSAICVFLGYGDGQKGYRCY 261

Query: 330 DPSAKRICRYVSFHVIFLE 386
           DP A+++  YVS HV+FLE
Sbjct: 262 DPHARKL--YVSRHVVFLE 278


>ref|XP_006350260.1| PREDICTED: uncharacterized protein LOC102600160 [Solanum tuberosum]
          Length = 580

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/82 (42%), Positives = 43/82 (52%)
 Frame = +3

Query: 141 SSIYPCGVSSFENLYGRSPNYFLILWLYMLCCSSLKKSNK*FACSALCIFLGYGHGQKGY 320
           SS+   G+  F  L+G SPNY  +      CC  LK   K    +  CIF+GY    KGY
Sbjct: 325 SSVLKHGIP-FVKLFGASPNYNSLKVFGCRCCPYLKGKTKFSPKTYPCIFIGYSSLHKGY 383

Query: 321 GCYDPSAKRICRYVSFHVIFLE 386
            CY P  +R+  YVS HVIF E
Sbjct: 384 KCYHPQTRRV--YVSRHVIFDE 403