BLASTX nr result
ID: Cocculus23_contig00021029
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00021029
(612 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis] 102 5e-33
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun... 108 2e-32
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-31
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-31
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 101 5e-31
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi... 106 2e-29
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p... 94 3e-29
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-28
ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phas... 94 2e-28
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 87 8e-27
emb|CBI30094.3| unnamed protein product [Vitis vinifera] 106 2e-26
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr... 94 7e-26
ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Caps... 92 4e-25
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-24
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar... 89 2e-24
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ... 89 2e-24
ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-24
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,... 89 2e-23
gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial... 77 9e-22
ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group] g... 78 7e-21
>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
Length = 622
Score = 102 bits (253), Expect(2) = 5e-33
Identities = 49/104 (47%), Positives = 70/104 (67%)
Frame = +3
Query: 144 KRGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREV 323
+R S++ A+S+W LTKL++ G++ +ARQVFD +P+RDV + T VI+G RCG E
Sbjct: 34 ERDYSVNSGVARSNWWLTKLSKSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEA 93
Query: 324 PILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD ADAKK+V+ WT M+ R ++ E E+LF +M KNV
Sbjct: 94 RKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNV 137
Score = 65.5 bits (158), Expect(2) = 5e-33
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTMI Y Q G +++A+ LF++MPERNV S N IIT L QSGR+ EAR+
Sbjct: 138 VSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARR 189
Score = 66.6 bits (161), Expect(2) = 3e-17
Identities = 35/97 (36%), Positives = 59/97 (60%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T L + G+MEEAR++FD +PERDV S T +++G R G E ++FD
Sbjct: 166 RNVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFDRM 225
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W MI ++ +++E +LF +M +N+
Sbjct: 226 PV-QNVVSWNAMITGYAQNMRLNEAFELFERMPERNL 261
Score = 48.1 bits (113), Expect(2) = 3e-17
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ ++Q G + A +LF KMPE+N S +I+ Q G+ EA K
Sbjct: 263 SWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALK 313
Score = 53.5 bits (127), Expect(2) = 6e-15
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +2
Query: 446 QKCLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
Q +SWN MI+ Y Q ++ A +LFE+MPERN++S N +IT Q+G + A
Sbjct: 228 QNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGFIQNGELKRA 280
Score = 53.1 bits (126), Expect(2) = 6e-15
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
++G++ A +FDR+PER+V S +I+ + G E LFD +++V+ WTTM+
Sbjct: 149 QNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMM-PERDVISWTTMVA 207
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
R+ ++ E +F +M +NV
Sbjct: 208 GFSRNGRIDEARVVFDRMPVQNV 230
>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
gi|462399953|gb|EMJ05621.1| hypothetical protein
PRUPE_ppb002215mg [Prunus persica]
Length = 634
Score = 108 bits (269), Expect(2) = 2e-32
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +3
Query: 147 RGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVP 326
R S N AQS+WL+T+L++DGK EARQVFD +P++DV + T VI+G IRCG E
Sbjct: 45 RDFSASFNVAQSNWLITRLSKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEAR 104
Query: 327 ILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD DAKK+V+ WT ++ R Q+ E E+LF+QM KNV
Sbjct: 105 SLFDRVDAKKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNV 147
Score = 57.8 bits (138), Expect(2) = 2e-32
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWNTMI Y + + A++LFE+MPE+NV S N ++T L SGRI EAR
Sbjct: 148 VSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEAR 198
Score = 57.0 bits (136), Expect(2) = 9e-14
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +LT L G++EEAR F+ +PERDV S T +++G R G E FD
Sbjct: 176 KNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFDRM 235
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
K+NVV W MI ++ ++ E +LF +M +++
Sbjct: 236 -PKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDM 271
Score = 45.8 bits (107), Expect(2) = 9e-14
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGR 592
SWNTMI+ ++Q G + A +LF +MP++NV S +IT Q G+
Sbjct: 273 SWNTMITGFIQNGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQ 317
Score = 48.1 bits (113), Expect(2) = 9e-07
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ +R+G ++EAR+ FDR+P+R+V S +I+G + E LF+ +
Sbjct: 211 SWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGR- 269
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++ W TMI ++ + ++LF +M KNV
Sbjct: 270 DMPSWNTMITGFIQNGDLKRAQELFIRMPQKNV 302
Score = 30.8 bits (68), Expect(2) = 9e-07
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 443 PQK-CLSWNTMISDYVQIGGISNAIDLFEKM 532
PQK +SW TMI+ YVQ G A+ F KM
Sbjct: 298 PQKNVISWTTMITGYVQDGQNEKALMFFSKM 328
>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 101 bits (252), Expect(2) = 1e-31
Identities = 50/103 (48%), Positives = 68/103 (66%)
Frame = +3
Query: 147 RGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVP 326
R S + N A+S+WL+T+L ++GK+ EARQVF+ +P+RDV S T VI+G I+CG E
Sbjct: 58 RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAK 117
Query: 327 ILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD DA KNVV WT ++ R N++ E +LF M KNV
Sbjct: 118 TLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV 160
Score = 61.6 bits (148), Expect(2) = 1e-31
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTMI Y + G I A+DLFEKMPERNV S N +IT Q R+ EA++
Sbjct: 161 ISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQE 212
Score = 58.5 bits (140), Expect(2) = 8e-15
Identities = 31/97 (31%), Positives = 58/97 (59%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T + +++EA+++F+R+PERDV S T +++G + G + +LFD+
Sbjct: 189 RNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W TMI ++ ++ E KLF QM + +
Sbjct: 249 PV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPEREL 284
Score = 47.8 bits (112), Expect(2) = 8e-15
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ ++Q G + A+D F KM +NV + +I+ Q GR EA K
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336
>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 714
Score = 101 bits (252), Expect(2) = 1e-31
Identities = 50/103 (48%), Positives = 69/103 (66%)
Frame = +3
Query: 147 RGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVP 326
R S + A+S+WL+TKL+RDG++ EARQVFD +PERDV + T VI+ ++ G E
Sbjct: 42 RDHSASSDVAKSNWLITKLSRDGRIREARQVFDEMPERDVVTWTTVITAYVKSGMLEEAR 101
Query: 327 ILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD ADA KNV+ WT ++G R ++ E E LF+QM +NV
Sbjct: 102 SLFDRADAVKNVITWTALVGGYIRLRRLEEAEMLFYQMPVRNV 144
Score = 61.2 bits (147), Expect(2) = 1e-31
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTMI Y + + A++LFE+MPERNV S N ++T L Q GRI EAR+
Sbjct: 145 VSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARR 196
Score = 58.9 bits (141), Expect(2) = 4e-15
Identities = 32/97 (32%), Positives = 57/97 (58%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +LT L + G++EEAR++F +PERDV S T +++G R G E +FD
Sbjct: 173 RNVVSWNTVLTALAQCGRIEEARRLFGLMPERDVISWTAMVAGLSRNGRVDEAREVFDRM 232
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++NVV W M+ ++ ++ E +LF +M +++
Sbjct: 233 -PRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDM 268
Score = 48.5 bits (114), Expect(2) = 4e-15
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
SWNTM++ ++Q G + A +LF +MP++NV S +IT Q GR EA
Sbjct: 270 SWNTMVTGFIQNGDLERAWELFVQMPQKNVISWTTMITGYVQDGRNEEA 318
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L+R+G+++EAR+VFDR+P R+V S +++G + G E LF+ ++
Sbjct: 208 SWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMP-ER 266
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++ W TM+ ++ + +LF QM KNV
Sbjct: 267 DMPSWNTMVTGFIQNGDLERAWELFVQMPQKNV 299
Score = 32.7 bits (73), Expect(2) = 1e-09
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 443 PQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLN 559
PQK +SW TMI+ YVQ G A+ +F KM N A N
Sbjct: 295 PQKNVISWTTMITGYVQDGRNEEALMIFSKMVVDNGARPN 334
Score = 45.4 bits (106), Expect(2) = 2e-09
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
+SW M++ + G + A ++F++MP RNV S N ++T Q+GR+ EA
Sbjct: 207 ISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEA 256
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +3
Query: 216 KMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIGRCK 395
++EEA +F ++P R+V S +I G R E LF E ++NVV W T++
Sbjct: 128 RLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELF-ERMPERNVVSWNTVLTALA 186
Query: 396 RSNQVSEVEKLFHQMTHKNV 455
+ ++ E +LF M ++V
Sbjct: 187 QCGRIEEARRLFGLMPERDV 206
Score = 56.2 bits (134), Expect = 7e-06
Identities = 28/97 (28%), Positives = 54/97 (55%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++ R +++EA ++F+R+PER+V S V++ +CG E LF
Sbjct: 142 RNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLFG-L 200
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+++V+ WT M+ R+ +V E ++F +M +NV
Sbjct: 201 MPERDVISWTAMVAGLSRNGRVDEAREVFDRMPRRNV 237
>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 101 bits (252), Expect(2) = 5e-31
Identities = 50/103 (48%), Positives = 68/103 (66%)
Frame = +3
Query: 147 RGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVP 326
R S + N A+S+WL+T+L ++GK+ EARQVF+ +P+RDV S T VI+G I+CG E
Sbjct: 58 RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAK 117
Query: 327 ILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD DA KNVV WT ++ R N++ E +LF M KNV
Sbjct: 118 TLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV 160
Score = 59.3 bits (142), Expect(2) = 5e-31
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTMI Y + G I A+DLFE MPERNV S N +IT Q R+ EA++
Sbjct: 161 ISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQE 212
Score = 58.5 bits (140), Expect(2) = 8e-15
Identities = 31/97 (31%), Positives = 58/97 (59%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T + +++EA+++F+R+PERDV S T +++G + G + +LFD+
Sbjct: 189 RNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W TMI ++ ++ E KLF QM + +
Sbjct: 249 PV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPEREL 284
Score = 47.8 bits (112), Expect(2) = 8e-15
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ ++Q G + A+D F KM +NV + +I+ Q GR EA K
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336
>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 106 bits (265), Expect(2) = 2e-29
Identities = 50/104 (48%), Positives = 74/104 (71%)
Frame = +3
Query: 144 KRGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREV 323
++ ++ N A+ +W++T L++DG++ EAR++FD + E DV + T VISG I+CG E
Sbjct: 43 RKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEA 102
Query: 324 PILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD DAKKNVV WT M+G RSN++S+ EKLF++M +KNV
Sbjct: 103 RRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV 146
Score = 48.9 bits (115), Expect(2) = 2e-29
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWNT++S Q G I A LF++MPER+V S +I L ++GRI EAR
Sbjct: 178 VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEAR 228
Score = 57.0 bits (136), Expect(2) = 2e-16
Identities = 28/98 (28%), Positives = 55/98 (56%)
Frame = +3
Query: 162 HQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDE 341
++N + ++ ++G+++ A +F+++PER+V S V+S +CG E LFD
Sbjct: 143 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDR 202
Query: 342 ADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+++V+ WT MI ++ ++ E LF +M +NV
Sbjct: 203 M-PERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNV 239
Score = 55.1 bits (131), Expect(2) = 2e-16
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN MI+ Y Q + A+DLFE+MPER++ S N +IT L Q+G + ARK
Sbjct: 240 VSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARK 291
Score = 62.0 bits (149), Expect(2) = 3e-15
Identities = 34/97 (35%), Positives = 59/97 (60%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +++ L + G++EEAR++FDR+PERDV S T +I+G + G E +LFD
Sbjct: 175 RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM 234
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++NVV W MI ++ ++ E LF +M +++
Sbjct: 235 -PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDL 270
Score = 45.8 bits (107), Expect(2) = 3e-15
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ +Q G + A LF +MP++NV S +IT Q G EA K
Sbjct: 272 SWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALK 322
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L ++ P K +SWNTMI Y Q G I +A+ LFEKMPERNV S N +++ L Q GRI
Sbjct: 135 EKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIE 194
Query: 599 EARK 610
EAR+
Sbjct: 195 EARR 198
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++T ++ +++EA +F+R+PERD+ S +I+G I+ G R LF+E KK
Sbjct: 241 SWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEM-PKK 299
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
NV+ WTTMI C + + E K+F +M N
Sbjct: 300 NVISWTTMITGCVQEGESEEALKIFSRMLSTN 331
>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590635100|ref|XP_007028548.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508717152|gb|EOY09049.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 631
Score = 94.0 bits (232), Expect(2) = 3e-29
Identities = 47/102 (46%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERD--VGS*TLVISGCIRCGSTREVPI 329
S + + AQS+WL+TKL+ +GK+ + R++FD++P+RD V + T +ISG I+ G E
Sbjct: 41 SANSSVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARR 100
Query: 330 LFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD D+KKNVV WT M+ RSN++ E ++LF +M KNV
Sbjct: 101 LFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNV 142
Score = 60.8 bits (146), Expect(2) = 3e-29
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWNTM+ YVQ G + A +LF++MPERNV S N ++T L Q GR+ +AR
Sbjct: 143 VSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDAR 193
Score = 61.6 bits (148), Expect(2) = 2e-14
Identities = 33/97 (34%), Positives = 58/97 (59%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +LT L + G++E+AR +FDR+P+RDV S T +++G + G E +FD
Sbjct: 171 RNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFDRM 230
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++NVV W MI ++ ++ E +LF +M +N+
Sbjct: 231 -PERNVVSWNAMITGYSQNMKLDEAFELFERMPERNL 266
Score = 43.5 bits (101), Expect(2) = 2e-14
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWN MI+ ++Q G + A LF+K+P +NV S +IT Q + EA K
Sbjct: 268 SWNAMITGFIQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALK 318
Score = 52.8 bits (125), Expect(2) = 2e-14
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN MI+ Y Q + A +LFE+MPERN++S N +IT Q+G + A K
Sbjct: 236 VSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEK 287
Score = 52.0 bits (123), Expect(2) = 2e-14
Identities = 23/83 (27%), Positives = 48/83 (57%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
++G + +A ++F +PER+V S +++ +CG + LFD K++V+ WT M+
Sbjct: 154 QNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRM-PKRDVISWTAMVA 212
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
++ ++ E ++F +M +NV
Sbjct: 213 GLAKNGKIDEARRVFDRMPERNV 235
Score = 60.1 bits (144), Expect = 5e-07
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++T +++ K++EA ++F+R+PER++ S +I+G I+ G + LFD+ +K
Sbjct: 237 SWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKV-PRK 295
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQM 440
NVV WTTMI + Q E K+F +M
Sbjct: 296 NVVSWTTMITGYVQDEQSEEALKIFSKM 323
>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X2 [Glycine max]
gi|571479769|ref|XP_006587961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X3 [Glycine max]
gi|571479771|ref|XP_003533693.2| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X1 [Glycine max]
Length = 618
Score = 93.2 bits (230), Expect(2) = 1e-28
Identities = 43/100 (43%), Positives = 68/100 (68%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILF 335
++H + + +++L R+G+++ AR+VF+ +PERD+G T +I+G ++CG RE LF
Sbjct: 33 NLHTEMKRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLF 92
Query: 336 DEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
D DAKKNVV WT M+ + NQV E E+LF++M +NV
Sbjct: 93 DRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNV 132
Score = 59.7 bits (143), Expect(2) = 1e-28
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTM+ Y + G A+DLF +MPERNV S N IIT L Q GRI +A++
Sbjct: 133 VSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQR 184
Score = 58.9 bits (141), Expect(2) = 2e-15
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
R+G ++A +F R+PER+V S +I+ ++CG + LFD+ ++VV WTTM+
Sbjct: 144 RNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQM-KDRDVVSWTTMVA 202
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
++ +V + LF QM +NV
Sbjct: 203 GLAKNGRVEDARALFDQMPVRNV 225
Score = 49.7 bits (117), Expect(2) = 2e-15
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN MI+ Y Q + A+ LF++MPER++ S N +IT Q+G + A K
Sbjct: 226 VSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEK 277
Score = 56.6 bits (135), Expect(2) = 3e-12
Identities = 28/97 (28%), Positives = 58/97 (59%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T L + G++E+A+++FD++ +RDV S T +++G + G + LFD+
Sbjct: 161 RNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQM 220
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W MI ++ ++ E +LF +M +++
Sbjct: 221 PV-RNVVSWNAMITGYAQNRRLDEALQLFQRMPERDM 256
Score = 40.8 bits (94), Expect(2) = 3e-12
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
SWNTMI+ ++Q G ++ A LF +M E+NV + ++T Q G EA
Sbjct: 258 SWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEA 306
>ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
gi|561034899|gb|ESW33429.1| hypothetical protein
PHAVU_001G068400g [Phaseolus vulgaris]
Length = 616
Score = 94.4 bits (233), Expect(2) = 2e-28
Identities = 47/100 (47%), Positives = 67/100 (67%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILF 335
S H + + L+ +L DGK+++AR+VFD++ +RD+G T +I+G ++CG RE LF
Sbjct: 30 SNHPEMKRCNLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLF 89
Query: 336 DEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
D DAKKNVV WT MI R NQV E E+LF++M +NV
Sbjct: 90 DRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNV 129
Score = 58.2 bits (139), Expect(2) = 2e-28
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTM+ Y + G A+DLF +MPERNV S N IIT L Q G++ +A++
Sbjct: 130 VSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQR 181
Score = 59.3 bits (142), Expect(2) = 3e-17
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
R+G ++A +F R+PER+V S +I+ ++CG + LFD+ +++VV WTTM+
Sbjct: 141 RNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQM-KERDVVSWTTMVA 199
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
++ +V + LF QM +NV
Sbjct: 200 GLSKNGRVEDARALFDQMPVRNV 222
Score = 55.5 bits (132), Expect(2) = 3e-17
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN M++ Y Q G ++ A++LF++MPERN+ S N +IT Q+G + A K
Sbjct: 223 VSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEK 274
Score = 59.3 bits (142), Expect(2) = 1e-12
Identities = 29/97 (29%), Positives = 59/97 (60%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T L + GK+++A+++FD++ ERDV S T +++G + G + LFD+
Sbjct: 158 RNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFDQM 217
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W M+ ++ +++E +LF +M +N+
Sbjct: 218 PV-RNVVSWNVMVTGYAQNGRLNEALELFQRMPERNM 253
Score = 39.7 bits (91), Expect(2) = 1e-12
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ ++Q G +++A LF +M +NV + ++T Q G EA K
Sbjct: 255 SWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVK 305
Score = 57.4 bits (137), Expect(2) = 4e-08
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L+++G++E+AR +FD++P R+V S ++++G + G E LF ++
Sbjct: 193 SWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMP-ER 251
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNVCLGT 467
N+ W TMI ++ +++ EKLF +M KNV T
Sbjct: 252 NMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWT 288
Score = 26.2 bits (56), Expect(2) = 4e-08
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKM 532
++W M++ YVQ G A+ +F KM
Sbjct: 285 ITWTAMMTGYVQHGLSEEAVKVFNKM 310
>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cicer arietinum]
Length = 665
Score = 87.4 bits (215), Expect(2) = 8e-27
Identities = 41/100 (41%), Positives = 66/100 (66%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILF 335
SI + ++ ++ L + GK++EAR+VFD + ERD+ T +ISG I+CG +E LF
Sbjct: 44 SISLEMKRCNFFISSLCKQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLF 103
Query: 336 DEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
D +DA+KNV+ WT M+ + N++ E E+LF++M +NV
Sbjct: 104 DRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNV 143
Score = 59.3 bits (142), Expect(2) = 8e-27
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWNTMI Y + G A+DLF +MPERNV S N IIT L SGRI +A+
Sbjct: 144 VSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQ 194
Score = 53.9 bits (128), Expect(2) = 7e-13
Identities = 28/97 (28%), Positives = 54/97 (55%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++T L G++++A+ +F ++ ERDV S T +++G + G + LFD
Sbjct: 172 RNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDDARELFDRM 231
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+NVV W MI ++ ++ E KLF +M +++
Sbjct: 232 PV-RNVVSWNAMITGYAQNGRLDEALKLFERMPERDM 267
Score = 45.8 bits (107), Expect(2) = 7e-13
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ ++Q G ++ A LF++MP++NV + ++T Q G EA K
Sbjct: 269 SWNTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALK 319
Score = 56.6 bits (135), Expect = 5e-06
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L+++G++++AR++FDR+P R+V S +I+G + G E LF+ ++
Sbjct: 207 SWTTMVAGLSKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMP-ER 265
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNVCLGT 467
++ W TMI ++ ++ EKLF +M KNV T
Sbjct: 266 DMPSWNTMITGFIQNGDLNRAEKLFDEMPQKNVITWT 302
Score = 56.6 bits (135), Expect = 5e-06
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++T ++G+++EA ++F+R+PERD+ S +I+G I+ G LFDE +K
Sbjct: 238 SWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGFIQNGDLNRAEKLFDEM-PQK 296
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQM 440
NV+ WT+M+ + E K+F++M
Sbjct: 297 NVITWTSMMTGYVQHGLSEEALKIFNKM 324
>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 106 bits (265), Expect(2) = 2e-26
Identities = 50/104 (48%), Positives = 74/104 (71%)
Frame = +3
Query: 144 KRGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREV 323
++ ++ N A+ +W++T L++DG++ EAR++FD + E DV + T VISG I+CG E
Sbjct: 58 RKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEA 117
Query: 324 PILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
LFD DAKKNVV WT M+G RSN++S+ EKLF++M +KNV
Sbjct: 118 RRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV 161
Score = 38.9 bits (89), Expect(2) = 2e-26
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDL 577
+SWNT++S Q G I A LF++MPER+V S +I L
Sbjct: 193 VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL 233
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 26/98 (26%), Positives = 53/98 (54%)
Frame = +3
Query: 162 HQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDE 341
++N + ++ ++G+++ A +F+++PER+V S V+S +CG E LFD
Sbjct: 158 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDR 217
Query: 342 ADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+++V+ WT MI + + E LF +M +++
Sbjct: 218 M-PERDVISWTAMI-----AGLLDEALDLFERMPERDL 249
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ +Q G + A LF +MP++NV S +IT Q G EA K
Sbjct: 251 SWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALK 301
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L ++ P K +SWNTMI Y Q G I +A+ LFEKMPERNV S N +++ L Q GRI
Sbjct: 150 EKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIE 209
Query: 599 EARK 610
EAR+
Sbjct: 210 EARR 213
Score = 60.1 bits (144), Expect = 5e-07
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 26/122 (21%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*T---------------------- 278
+N + +++ L + G++EEAR++FDR+PERDV S T
Sbjct: 190 RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDL 249
Query: 279 ----LVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTH 446
+I+G I+ G R LF+E KKNV+ WTTMI C + + E K+F +M
Sbjct: 250 PSWNTMITGLIQNGDLRRARKLFNEM-PKKNVISWTTMITGCVQEGESEEALKIFSRMLS 308
Query: 447 KN 452
N
Sbjct: 309 TN 310
>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
gi|557111828|gb|ESQ52112.1| hypothetical protein
EUTSA_v10016379mg [Eutrema salsugineum]
Length = 626
Score = 93.6 bits (231), Expect(2) = 7e-26
Identities = 46/99 (46%), Positives = 64/99 (64%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILF 335
S H + WL+ KL ++G++ EAR+VFDR+P+RD + T VI+G I+ G+ RE LF
Sbjct: 40 SSHSRIPRPEWLIKKLCKEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELF 99
Query: 336 DEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
D ADA+KNVV WT M+ R+ Q S E LF +M +N
Sbjct: 100 DRADARKNVVTWTAMVSGYLRAKQFSAAEMLFQEMPERN 138
Score = 50.1 bits (118), Expect(2) = 7e-26
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNT+I Q+G I A++LFE+MP R+V S ++ L ++G++ EAR+
Sbjct: 171 VSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARR 222
Score = 54.7 bits (130), Expect(2) = 7e-13
Identities = 29/96 (30%), Positives = 52/96 (54%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + L+ L + G+++EA +F+R+P RDV S T ++ G + G E +FD
Sbjct: 168 RNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVFD-C 226
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
++N + W MI +N++ E ++LF M +N
Sbjct: 227 MPERNTISWNAMITGYAHNNRIEEADQLFQVMPERN 262
Score = 45.1 bits (105), Expect(2) = 7e-13
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ +++ G I+ A LF++MP++NV S +IT Q+ +A K
Sbjct: 265 SWNTMITGFIRNGEINRACGLFDRMPQKNVISWTTMITGYVQNKENEDALK 315
Score = 46.6 bits (109), Expect(2) = 6e-11
Identities = 22/82 (26%), Positives = 45/82 (54%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
+ G++++A ++FD +PER+ S +I + G +E LF+ ++V+ WT M+
Sbjct: 151 QSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPT-RDVISWTAMVD 209
Query: 387 RCKRSNQVSEVEKLFHQMTHKN 452
++ +V E ++F M +N
Sbjct: 210 GLGKNGKVDEARRVFDCMPERN 231
Score = 46.6 bits (109), Expect(2) = 6e-11
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
+SWN MI+ Y I A LF+ MPERN AS N +IT ++G I A
Sbjct: 233 ISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRA 282
Score = 60.8 bits (146), Expect = 3e-07
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +2
Query: 410 FGSREALSSDDPQKC-LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQS 586
F + E L + P++ +SWNTMI Y Q G I A++LF++MPERN S N +I L Q
Sbjct: 124 FSAAEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTLIKALAQL 183
Query: 587 GRIVEA 604
GRI EA
Sbjct: 184 GRIQEA 189
Score = 52.8 bits (125), Expect(2) = 4e-07
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L ++GK++EAR+VFD +PER+ S +I+G E LF + ++
Sbjct: 203 SWTAMVDGLGKNGKVDEARRVFDCMPERNTISWNAMITGYAHNNRIEEADQLF-QVMPER 261
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
N W TMI R+ +++ LF +M KNV
Sbjct: 262 NFASWNTMITGFIRNGEINRACGLFDRMPQKNV 294
Score = 27.3 bits (59), Expect(2) = 4e-07
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 443 PQK-CLSWNTMISDYVQIGGISNAIDLFEKM 532
PQK +SW TMI+ YVQ +A+ +F M
Sbjct: 290 PQKNVISWTTMITGYVQNKENEDALKVFSNM 320
>ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Capsella rubella]
gi|482564867|gb|EOA29057.1| hypothetical protein
CARUB_v10025312mg [Capsella rubella]
Length = 636
Score = 92.4 bits (228), Expect(2) = 4e-25
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +3
Query: 129 SYKK*KRGCSIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCG 308
S++ + G S + + WL+ +L R+G++ EAR++FD +PERDV + T VI+G I+ G
Sbjct: 41 SHRPRREGYSSNSRVPRPEWLIGELCREGRIVEARKLFDGLPERDVVTWTDVITGYIKLG 100
Query: 309 STREVPILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+ RE LFD D++KNVV WT M+ RS Q+S E LF M +N+
Sbjct: 101 NMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAEMLFQDMPERNI 149
Score = 48.5 bits (114), Expect(2) = 4e-25
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 428 LSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
L + P+K +SWNTM+ VQ G I A++LF++MP R+V S ++ L ++G++ +A
Sbjct: 171 LFDEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVDDA 230
Query: 605 RK 610
R+
Sbjct: 231 RQ 232
Score = 54.7 bits (130), Expect(2) = 8e-12
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L + G+++EA +F R+P RDV S T ++ G + G + LFD ++
Sbjct: 182 SWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVDDARQLFDSM-PER 240
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
N++ W MI +N++ E ++LF M ++
Sbjct: 241 NIISWNAMITGYAHNNRIDEADQLFQVMPERD 272
Score = 41.6 bits (96), Expect(2) = 8e-12
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ +++ I+ A LF++MPE+NV S +IT ++ +A K
Sbjct: 275 SWNTMITGFIRNKNINRASVLFDRMPEKNVISWTTMITGYVENKENEDALK 325
Score = 51.2 bits (121), Expect(2) = 7e-07
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L ++GK+++ARQ+FD +PER++ S +I+G E LF + ++
Sbjct: 213 SWTAMVDGLAKNGKVDDARQLFDSMPERNIISWNAMITGYAHNNRIDEADQLF-QVMPER 271
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+ W TMI R+ ++ LF +M KNV
Sbjct: 272 DFASWNTMITGFIRNKNINRASVLFDRMPEKNV 304
Score = 28.1 bits (61), Expect(2) = 7e-07
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +2
Query: 443 PQK-CLSWNTMISDYVQIGGISNAIDLFEKM-----PERNVASLNMIITDLFQSGRIVEA 604
P+K +SW TMI+ YV+ +A+ F KM + NV + I++ S +VE
Sbjct: 300 PEKNVISWTTMITGYVENKENEDALKFFSKMLRDGYVKPNVGTYVSILSACSDSAGLVEG 359
Query: 605 RK 610
++
Sbjct: 360 QQ 361
Score = 59.3 bits (142), Expect = 8e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L D P++ +SWNTM+ Y Q G I A++LF++MPE+N+ S N ++ L Q GRI
Sbjct: 138 EMLFQDMPERNIVSWNTMVDGYAQSGRIDKALELFDEMPEKNIVSWNTMMKALVQRGRID 197
Query: 599 EA 604
EA
Sbjct: 198 EA 199
>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Solanum lycopersicum]
Length = 624
Score = 92.4 bits (228), Expect(2) = 1e-24
Identities = 43/98 (43%), Positives = 70/98 (71%)
Frame = +3
Query: 162 HQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDE 341
+Q+ ++S+ +++KL+++G+++EAR++FD++ E DV S T +ISG IRCG + LFD
Sbjct: 49 NQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDR 108
Query: 342 ADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
DAK++VV WT M+ R N++ E E LF++M KNV
Sbjct: 109 TDAKRDVVTWTAMVAAYARMNRILEAEMLFNEMPEKNV 146
Score = 47.4 bits (111), Expect(2) = 1e-24
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWN +I+ Q G I+ A LF++MPE+NV S +I L ++GR+ EAR
Sbjct: 178 VSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEAR 228
Score = 58.9 bits (141), Expect(2) = 3e-13
Identities = 33/97 (34%), Positives = 56/97 (57%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++ L ++G++ EAR +FD++PE++V S T +I+G R G E LFD
Sbjct: 175 RNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRT 234
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++NVV W MI +++++ E +LF M K V
Sbjct: 235 -PERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIV 270
Score = 42.4 bits (98), Expect(2) = 3e-13
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 443 PQKCLS-WNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
P+K +S WNTMI ++Q G + A LF+KM +R+V S + +I GR EA
Sbjct: 266 PEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGYMLKGRSEEA 320
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L ++ P+K +SWN++I Y + G I ++LF KM ERNV S NM+I L Q+GRI
Sbjct: 135 EMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRIN 194
Query: 599 EAR 607
EAR
Sbjct: 195 EAR 197
>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein
[Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 89.0 bits (219), Expect(2) = 2e-24
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = +3
Query: 177 QSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
Q WL+ +L + GK+ EAR++FD +PERDV + T VI+G I+ G RE LFD D++K
Sbjct: 48 QPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
NVV WT M+ RS Q+S E LF +M +NV
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV 140
Score = 50.1 bits (118), Expect(2) = 2e-24
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN+M+ VQ G I A++LFE+MP R+V S ++ L ++G++ EAR+
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223
Score = 56.2 bits (134), Expect(2) = 4e-12
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L + G+++EA +F+R+P RDV S T ++ G + G E LFD ++
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD-CMPER 231
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
N++ W MI ++N++ E ++LF M ++
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Score = 40.8 bits (94), Expect(2) = 4e-12
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
SWNTMI+ +++ ++ A LF++MPE+NV S +IT ++ EA
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Score = 50.8 bits (120), Expect(2) = 5e-11
Identities = 24/97 (24%), Positives = 53/97 (54%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++ + G++++A ++FD +PER++ S ++ ++ G E LF+
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+++VV WT M+ ++ +V E +LF M +N+
Sbjct: 198 P-RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Score = 42.7 bits (99), Expect(2) = 5e-11
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
+SWN MI+ Y Q I A LF+ MPER+ AS N +IT ++ + +A
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Score = 60.1 bits (144), Expect = 5e-07
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L + P++ +SWNTMI Y Q G I A++LF++MPERN+ S N ++ L Q GRI
Sbjct: 129 EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRID 188
Query: 599 EA 604
EA
Sbjct: 189 EA 190
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW ++ L ++GK++EAR++FD +PER++ S +I+G + E LF + ++
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF-QVMPER 262
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
+ W TMI R+ ++++ LF +M KNV
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNV 295
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 443 PQK-CLSWNTMISDYVQIGGISNAIDLFEKM 532
P+K +SW TMI+ YV+ A+++F KM
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKM 321
>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297327209|gb|EFH57629.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 89.4 bits (220), Expect(2) = 2e-24
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +3
Query: 186 WLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVV 365
WL+ KL + GK+ EAR++FD +PERDV + T VI+G I+ G+ RE LFD D++KNVV
Sbjct: 51 WLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVV 110
Query: 366 EWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
WT M+ RS Q+S E LF +M +N+
Sbjct: 111 TWTAMVSGYLRSKQLSVAETLFQEMPERNI 140
Score = 49.3 bits (116), Expect(2) = 2e-24
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTMI VQ G I A++LFE+MP ++V S ++ L ++G++ EAR+
Sbjct: 172 VSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARR 223
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 27/96 (28%), Positives = 53/96 (55%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++ L + G+++EA +F+R+P +DV S T ++ G + G E LFD
Sbjct: 169 RNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFD-C 227
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
++N++ W MI +N++ E ++LF M ++
Sbjct: 228 MPERNIISWNAMITGYTYNNRIDEADQLFQVMPERD 263
Score = 42.0 bits (97), Expect(2) = 2e-11
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
SWNTMI+ +++ I+ A LF++MP++NV S +IT ++ EA K
Sbjct: 266 SWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALK 316
Score = 49.7 bits (117), Expect(2) = 3e-10
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
+ G++++A ++FD +PER+ S +I ++ G E LF+ K +V+ WT M+
Sbjct: 152 QSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIK-DVISWTAMVD 210
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
++ +V E +LF M +N+
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNI 233
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
+SWN MI+ Y I A LF+ MPER+ AS N +IT ++ I A
Sbjct: 234 ISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRA 283
Score = 59.7 bits (143), Expect = 6e-07
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L + P++ +SWNTMI Y Q G I A++LF++MPERN S N +I L Q GRI
Sbjct: 129 ETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRID 188
Query: 599 EA 604
EA
Sbjct: 189 EA 190
>ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Solanum tuberosum]
Length = 641
Score = 92.8 bits (229), Expect(2) = 3e-24
Identities = 43/98 (43%), Positives = 71/98 (72%)
Frame = +3
Query: 162 HQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDE 341
+Q+ ++S+ +++KL+++G+++EAR++FD++ E DV S T +ISG IRCG + LFD
Sbjct: 49 NQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDR 108
Query: 342 ADAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
DAK++VV WT M+ R+N++ E E LF++M KNV
Sbjct: 109 TDAKRDVVTWTAMLAAYARTNRILEAEMLFNEMPEKNV 146
Score = 45.4 bits (106), Expect(2) = 3e-24
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEAR 607
+SWN +I+ + G I+ A LF++MPE+NV S +I L ++GR+ EAR
Sbjct: 178 VSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEAR 228
Score = 60.8 bits (146), Expect(2) = 1e-14
Identities = 34/97 (35%), Positives = 56/97 (57%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + ++ L R+G++ EAR +FD++PE++V S T +I+G R G E LFD
Sbjct: 175 RNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDRT 234
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++NVV W MI +++++ E +LF M K V
Sbjct: 235 -PERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIV 270
Score = 45.1 bits (105), Expect(2) = 1e-14
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 443 PQKCLS-WNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
P+K +S WNTMI ++Q G + A LF+KM +R+V S + +I Q GR EA
Sbjct: 266 PEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGYMQEGRSEEA 320
Score = 57.0 bits (136), Expect = 4e-06
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 422 EALSSDDPQK-CLSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIV 598
E L ++ P+K +SWN++I Y + G I ++LF KM ERNV S NM+I L ++GRI
Sbjct: 135 EMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRIN 194
Query: 599 EAR 607
EAR
Sbjct: 195 EAR 197
>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 453
Score = 89.0 bits (219), Expect(2) = 2e-23
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Frame = +3
Query: 156 SIHQNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILF 335
S A+ +W +TKL R+GK+ EARQVFDR+ ERDV + T VI+G I+C E LF
Sbjct: 50 SASSEVARFNWHITKLCREGKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLF 109
Query: 336 DEADAKKNVVEWTTMIGRCKRSNQVSEVE------KLFHQMTHKNV 455
D ADA KNVV WT M+ R NQV E E +LF +M ++V
Sbjct: 110 DRADAMKNVVTWTAMVSGYMRLNQVLEAERVDEARRLFDEMPKRDV 155
Score = 46.6 bits (109), Expect(2) = 2e-23
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
+SW M++ + G I A +F+KMPERNV S N +IT ++ R+VEA
Sbjct: 156 ISWTAMVAGLARNGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEA 205
Score = 52.4 bits (124), Expect(2) = 8e-11
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +3
Query: 216 KMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIGRCK 395
+++EAR++FD +P+RDV S T +++G R G E +FD+ ++NVV W MI
Sbjct: 139 RVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKM-PERNVVSWNAMITGYA 197
Query: 396 RSNQVSEVEKLFHQMTHKNV 455
++ ++ E +LF +M +++
Sbjct: 198 KNMRLVEAFELFERMPERDL 217
Score = 40.4 bits (93), Expect(2) = 8e-11
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSG 589
SWNTMI+ ++Q + A L ++MPE+NV S +IT Q G
Sbjct: 219 SWNTMITGFIQNKELKLARKLLDEMPEKNVVSWTTMITGYVQEG 262
>gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial [Mimulus
guttatus]
Length = 539
Score = 76.6 bits (187), Expect(2) = 9e-22
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +3
Query: 249 IPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIGRCKRSNQVSEVEKL 428
+P+RDV S T +ISG ++CG +E LFD ADAKK+VV WT+MI +S ++SE E+L
Sbjct: 1 MPDRDVISWTALISGYVKCGLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERL 60
Query: 429 FHQMTHKNV 455
FH M KNV
Sbjct: 61 FHAMPDKNV 69
Score = 53.1 bits (126), Expect(2) = 9e-22
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEA 604
++WNTMI YV+ G I +A+ +F++M ERNV S N +I+ L GRI EA
Sbjct: 70 VTWNTMIDGYVRSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEA 119
Score = 58.5 bits (140), Expect(2) = 5e-16
Identities = 33/83 (39%), Positives = 43/83 (51%)
Frame = +3
Query: 207 RDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKNVVEWTTMIG 386
R G++E A VFD + ER+V S VISG + CG E F KNV+ WT MI
Sbjct: 81 RSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAMGFFSRTPL-KNVISWTIMIS 139
Query: 387 RCKRSNQVSEVEKLFHQMTHKNV 455
R+ +V E LF + +NV
Sbjct: 140 GLARNKRVDEARLLFDTVPERNV 162
Score = 52.0 bits (123), Expect(2) = 5e-16
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN MI+ Y Q +S A +LF+KMPE++ S N +IT Q+G + +ARK
Sbjct: 163 VSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMITAFIQNGELEKARK 214
Score = 51.2 bits (121), Expect(2) = 3e-11
Identities = 31/96 (32%), Positives = 52/96 (54%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +++ L G+++EA F R P ++V S T++ISG R E +LFD
Sbjct: 98 RNVVSWNTVISGLVNCGRIDEAMGFFSRTPLKNVISWTIMISGLARNKRVDEARLLFDTV 157
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKN 452
++NVV W MI ++ ++SE LF +M K+
Sbjct: 158 -PERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKD 192
Score = 43.1 bits (100), Expect(2) = 3e-11
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPE-RNVASLNMIITDLFQSGRIVEA 604
SWN MI+ ++Q G + A LF++MP +NV S II+ L QSG EA
Sbjct: 195 SWNAMITAFIQNGELEKARKLFDEMPAGKNVVSWTAIISGLMQSGESEEA 244
>ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein
LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125534237|gb|EAY80785.1| hypothetical protein
OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein
OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa
Japonica Group]
Length = 622
Score = 77.8 bits (190), Expect(2) = 7e-21
Identities = 36/92 (39%), Positives = 58/92 (63%)
Frame = +3
Query: 180 SSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKKN 359
S+W + +L G++ +AR++FD +P+RDV S T +++ R G +E +LFD DA++N
Sbjct: 44 SNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRN 103
Query: 360 VVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
VV WT ++ R+ +V E E LF M +NV
Sbjct: 104 VVTWTALLSGYARARRVDEAEALFEGMAERNV 135
Score = 48.9 bits (115), Expect(2) = 7e-21
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWNTM+ Y +G + +A LF +MP R+ S N+++ L +SG + ARK
Sbjct: 136 VSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARK 187
Score = 57.4 bits (137), Expect(2) = 4e-15
Identities = 30/97 (30%), Positives = 51/97 (52%)
Frame = +3
Query: 165 QNAAQSSWLLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEA 344
+N + +L G++E+A +F+R+P RD GS +++ G +R GS +F+
Sbjct: 133 RNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERM 192
Query: 345 DAKKNVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
++V+ WTTMI R+ V + LF M +NV
Sbjct: 193 PV-RDVMSWTTMISGLARNGSVDDAWVLFDAMPERNV 228
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 455 LSWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQSGRIVEARK 610
+SWN MIS Y + I A+DLF KMP R+VAS N++IT Q+ + AR+
Sbjct: 229 VSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQ 280
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +3
Query: 183 SW--LLTKLNRDGKMEEARQVFDRIPERDVGS*TLVISGCIRCGSTREVPILFDEADAKK 356
SW LL L R G +E AR++F+R+P RDV S T +ISG R GS + +LFD A ++
Sbjct: 168 SWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFD-AMPER 226
Query: 357 NVVEWTTMIGRCKRSNQVSEVEKLFHQMTHKNV 455
NVV W MI R++++ E LF +M ++V
Sbjct: 227 NVVSWNAMISGYARNHRIEEALDLFTKMPIRDV 259
Score = 35.8 bits (81), Expect(2) = 1e-13
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 458 SWNTMISDYVQIGGISNAIDLFEKMPERNVASLNMIITDLFQ 583
SWN MI+ ++Q + +A LF++MP+RNV + ++ Q
Sbjct: 261 SWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQ 302