BLASTX nr result
ID: Cocculus23_contig00020488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00020488
(477 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding prote... 75 1e-11
ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding prote... 75 1e-11
ref|XP_007031082.1| Mitochondrially targeted single-stranded DNA... 72 6e-11
ref|XP_007031081.1| Mitochondrially targeted single-stranded DNA... 72 6e-11
ref|XP_007045075.1| Mitochondrially targeted single-stranded DNA... 72 6e-11
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote... 72 6e-11
ref|XP_002319495.2| single-strand-binding family protein [Populu... 72 1e-10
gb|AFK40642.1| unknown [Lotus japonicus] 72 1e-10
gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indi... 71 1e-10
ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group] g... 71 1e-10
gb|ACR34070.1| unknown [Zea mays] gi|238006582|gb|ACR34326.1| un... 71 2e-10
ref|XP_006472157.1| PREDICTED: single-stranded DNA-binding prote... 70 2e-10
ref|XP_006433488.1| hypothetical protein CICLE_v10002449mg [Citr... 70 2e-10
ref|XP_004961560.1| PREDICTED: single-stranded DNA-binding prote... 70 2e-10
ref|XP_007207544.1| hypothetical protein PRUPE_ppa017404mg, part... 70 2e-10
ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding prote... 70 2e-10
dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 2e-10
gb|EYU37270.1| hypothetical protein MIMGU_mgv1a013559mg [Mimulus... 70 3e-10
ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding prote... 70 3e-10
ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding prote... 70 3e-10
>ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSINGEVKN+PEICVRRDG +RL++ GESA+NISLDDLK+GL
Sbjct: 168 DSINGEVKNIPEICVRRDGTLRLLKPGESASNISLDDLKEGL 209
>ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSINGEVKN+PEICVRRDG +RL++ GESA+NISLDDLK+GL
Sbjct: 168 DSINGEVKNIPEICVRRDGTLRLLKPGESASNISLDDLKEGL 209
>ref|XP_007031082.1| Mitochondrially targeted single-stranded DNA binding protein
isoform 2 [Theobroma cacao] gi|508719687|gb|EOY11584.1|
Mitochondrially targeted single-stranded DNA binding
protein isoform 2 [Theobroma cacao]
Length = 216
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVK +PEIC+RRDG++RLI+TGE +NIS DDL++GLL
Sbjct: 174 DSINGEVKYIPEICIRRDGRIRLIKTGEGVSNISFDDLREGLL 216
>ref|XP_007031081.1| Mitochondrially targeted single-stranded DNA binding protein
isoform 1 [Theobroma cacao] gi|508719686|gb|EOY11583.1|
Mitochondrially targeted single-stranded DNA binding
protein isoform 1 [Theobroma cacao]
Length = 214
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVK +PEIC+RRDG++RLI+TGE +NIS DDL++GLL
Sbjct: 172 DSINGEVKYIPEICIRRDGRIRLIKTGEGVSNISFDDLREGLL 214
>ref|XP_007045075.1| Mitochondrially targeted single-stranded DNA binding protein
[Theobroma cacao] gi|508709010|gb|EOY00907.1|
Mitochondrially targeted single-stranded DNA binding
protein [Theobroma cacao]
Length = 214
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVK +PEIC+RRDG++RLI+TGE +NIS DDL++GLL
Sbjct: 172 DSINGEVKYIPEICIRRDGRIRLIKTGEGVSNISFDDLREGLL 214
>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
protein product [Vitis vinifera]
Length = 208
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/42 (73%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSINGEVK+VPEIC+RRDG++RLI+TGES +NIS+D+L++GL
Sbjct: 165 DSINGEVKHVPEICIRRDGRIRLIKTGESISNISVDELREGL 206
>ref|XP_002319495.2| single-strand-binding family protein [Populus trichocarpa]
gi|550324675|gb|EEE95418.2| single-strand-binding family
protein [Populus trichocarpa]
Length = 215
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/42 (73%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSI+GEVKN+PEICVRRDGK+RLIR+GE+ +NIS +DL++GL
Sbjct: 172 DSISGEVKNIPEICVRRDGKIRLIRSGENISNISFEDLREGL 213
>gb|AFK40642.1| unknown [Lotus japonicus]
Length = 220
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSINGEVK++PEICVRRDGK+RLI++GESA ISLD+L++GL
Sbjct: 178 DSINGEVKSIPEICVRRDGKIRLIKSGESADKISLDELREGL 219
>gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein
OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/42 (73%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSIN +VKN+PEIC+RRDGK+RLI++GESAA+ISLD+L++GL
Sbjct: 203 DSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGL 244
>ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA
binding protein [Oryza sativa Japonica Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa
Japonica Group] gi|215706976|dbj|BAG93436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 206
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/42 (73%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSIN +VKN+PEIC+RRDGK+RLI++GESAA+ISLD+L++GL
Sbjct: 164 DSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGL 205
>gb|ACR34070.1| unknown [Zea mays] gi|238006582|gb|ACR34326.1| unknown [Zea mays]
gi|413945982|gb|AFW78631.1| hypothetical protein
ZEAMMB73_663564 [Zea mays] gi|413945983|gb|AFW78632.1|
hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 206
Score = 70.9 bits (172), Expect = 2e-10
Identities = 29/42 (69%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DS+N +VKN+PEICVRRDGK++L+++G+SAANISLD+L++GL
Sbjct: 164 DSVNDQVKNIPEICVRRDGKIQLVKSGDSAANISLDELREGL 205
>ref|XP_006472157.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Citrus sinensis]
Length = 180
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVKN+PEIC+RRDG +RL+++GES + IS DDL++GLL
Sbjct: 138 DSINGEVKNIPEICIRRDGTLRLVKSGESISKISFDDLREGLL 180
>ref|XP_006433488.1| hypothetical protein CICLE_v10002449mg [Citrus clementina]
gi|568836245|ref|XP_006472156.1| PREDICTED:
single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Citrus sinensis] gi|557535610|gb|ESR46728.1|
hypothetical protein CICLE_v10002449mg [Citrus
clementina]
Length = 214
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVKN+PEIC+RRDG +RL+++GES + IS DDL++GLL
Sbjct: 172 DSINGEVKNIPEICIRRDGTLRLVKSGESISKISFDDLREGLL 214
>ref|XP_004961560.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Setaria italica]
gi|514748209|ref|XP_004961561.1| PREDICTED:
single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Setaria italica]
Length = 206
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSIN +V+N+PEICVRRDGK+RL+++G+SAANISLD L++GL
Sbjct: 164 DSINDQVRNIPEICVRRDGKIRLVKSGDSAANISLDGLREGL 205
>ref|XP_007207544.1| hypothetical protein PRUPE_ppa017404mg, partial [Prunus persica]
gi|462403186|gb|EMJ08743.1| hypothetical protein
PRUPE_ppa017404mg, partial [Prunus persica]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGLL 349
DSINGEVKN+PEICVR DGK+RLI+TGES ++ISLDDL+ LL
Sbjct: 148 DSINGEVKNIPEICVRYDGKIRLIKTGESISSISLDDLRKFLL 190
>ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/42 (69%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSIN +VKN+PEIC+RRDGK+RL+++GESA++ISLD+L++GL
Sbjct: 163 DSINDQVKNIPEICIRRDGKIRLVKSGESASSISLDELREGL 204
>dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/42 (69%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
D I+G+V+N+PEIC+R DGK+RL+++GESAANISLD+L+DGL
Sbjct: 164 DGIDGQVRNIPEICIRGDGKIRLVKSGESAANISLDELRDGL 205
>gb|EYU37270.1| hypothetical protein MIMGU_mgv1a013559mg [Mimulus guttatus]
Length = 216
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
DSING+VK++PEICVRRDG+VRLI+ GES +NIS+D+L++GL
Sbjct: 174 DSINGDVKSIPEICVRRDGRVRLIKAGESMSNISIDELREGL 215
>ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 206
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/42 (71%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
D+IN +VKN+PEIC+RRDGK+RLI++GESAA+ISLD+L++GL
Sbjct: 164 DNINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGL 205
>ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 212
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/42 (71%), Positives = 41/42 (97%)
Frame = -1
Query: 477 DSINGEVKNVPEICVRRDGKVRLIRTGESAANISLDDLKDGL 352
D+IN +VKN+PEIC+RRDGK+RLI++GESAA+ISLD+L++GL
Sbjct: 170 DNINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGL 211