BLASTX nr result
ID: Cocculus23_contig00020152
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00020152
(674 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 302 6e-80
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 297 2e-78
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 295 9e-78
gb|AFB73912.1| polyprotein [Citrus sinensis] 295 1e-77
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 293 3e-77
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 293 4e-77
gb|AFB73911.1| polyprotein [Citrus sinensis] 290 4e-76
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 289 5e-76
gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior] 248 1e-63
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 205 9e-51
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 201 1e-49
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 201 1e-49
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 201 1e-49
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 200 3e-49
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 197 2e-48
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 197 2e-48
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 197 3e-48
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 197 3e-48
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 197 3e-48
gb|AAK29467.1| polyprotein-like [Solanum chilense] 197 3e-48
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 302 bits (774), Expect = 6e-80
Identities = 151/206 (73%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEY EF AFCKQEGI RQFTVA+TPQQNGVAERMNRTLL+RTRAML+TAG+
Sbjct: 547 LRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMA 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV+TACYVINR+PS+AI+ KTPMEMW GK DYS LH+FGCP YVMYN QERTK
Sbjct: 607 KSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQ-KKKNDSTVETTMFKV 136
LDPKSRKCIFLGYAD VKGYRLWDPTARKVV+SRDV+FAE + Q K+KNDST + T +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKET--AI 724
Query: 135 GXXXXXXXXXXXXEAIPEHEEQEPDE 58
EA P HEEQEPD+
Sbjct: 725 VQMEEKSKESDSSEAEPVHEEQEPDD 750
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 297 bits (761), Expect = 2e-78
Identities = 149/206 (72%), Positives = 166/206 (80%), Gaps = 1/206 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEY EF AFCKQEGI RQFTVA+TPQQNGVAERMNRTLL+RTRAML+TAG+
Sbjct: 547 LRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMA 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV+TACYVINR+PS+AI+ KTPMEMW GK DYS LH+FGCP YVMYN QERTK
Sbjct: 607 KSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQ-KKKNDSTVETTMFKV 136
LDPKSRKCIFLGYAD VKGYRLWDPTARKVV+SRDV+FAE + Q ++KNDST + T +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKET--AI 724
Query: 135 GXXXXXXXXXXXXEAIPEHEEQEPDE 58
EA HEEQEPD+
Sbjct: 725 VQMEEKSKESDSSEAESVHEEQEPDD 750
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 295 bits (755), Expect = 9e-78
Identities = 147/206 (71%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEY EF AFCKQEGI RQFTVA+TPQQNGVAERMNRTLL+RTRAML+TAG+
Sbjct: 547 LRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMA 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEA +TACYVINR+PS+AI+ KTPMEMW GK DYS LH+FGCP YVMYN QE+TK
Sbjct: 607 KSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQ-KKKNDSTVETTMFKV 136
LDPKSRKCIFLGYAD VKGYRLWDPTARKVV+SRDV+FAE + Q ++KNDST + T +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKET--AI 724
Query: 135 GXXXXXXXXXXXXEAIPEHEEQEPDE 58
EA HEEQEPD+
Sbjct: 725 VQMEEKSKESDSSEAESVHEEQEPDD 750
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 295 bits (754), Expect = 1e-77
Identities = 150/208 (72%), Positives = 162/208 (77%), Gaps = 2/208 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEYT +EF AFCKQEGI RQFTVAYTPQQNGVAERMNRTL +R RAMLRTAGL
Sbjct: 547 LRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLP 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
FWAEA +TACY++NR+PS+AI KT MEMWTGK ADYS LH FGCP YVMYN QERTK
Sbjct: 607 NSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPVYVMYNAQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKK-NDSTVETTMFKV 136
LDPKSRKCIFLGYADGVKGYRLWDPTA K+VISRDVIF E + Q+K +D TV+ V
Sbjct: 667 LDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGTVKEKSETV 726
Query: 135 G-XXXXXXXXXXXXEAIPEHEEQEPDES 55
EA PEHEEQEP ES
Sbjct: 727 PVYVENNPENSDSSEAAPEHEEQEPVES 754
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 293 bits (751), Expect = 3e-77
Identities = 148/207 (71%), Positives = 166/207 (80%), Gaps = 2/207 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEY EF AFCKQEGI RQFTVA+TPQQNGVAERMNRTLL+RTRAML+TA +
Sbjct: 547 LRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMA 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV+TACYVINR+PS+ I+ KTPMEMW GK DYS LH+FGCP YVMYN QERTK
Sbjct: 607 KSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQ-KKKNDSTV-ETTMFK 139
LDPKSRKCIFLGYAD VKGYRLWDPTARKVV+SRDV+FAE + Q ++KNDST ET + +
Sbjct: 667 LDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTFKETAILQ 726
Query: 138 VGXXXXXXXXXXXXEAIPEHEEQEPDE 58
+ EA HEEQEPD+
Sbjct: 727 I---EEKSKESDSSEAESVHEEQEPDD 750
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 293 bits (749), Expect = 4e-77
Identities = 146/206 (70%), Positives = 161/206 (78%), Gaps = 1/206 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEYT +F AFCKQEGI RQFTVA+TPQQNGVAERMNRTLL+RTRAML+TAGL
Sbjct: 547 LRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLA 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEA +TACYVINR+PS+AI KTPMEMW GK DYS L +FGCP YVMYN QERTK
Sbjct: 607 KSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQK-KKNDSTVETTMFKV 136
LDPKSR+C FLGYAD VKGYRLWDPTARK+ +SRDVIF E + QK +KND T + T
Sbjct: 667 LDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQKEQKNDGTTKET---A 723
Query: 135 GXXXXXXXXXXXXEAIPEHEEQEPDE 58
EA PEHEEQEP+E
Sbjct: 724 TVEIEEKSGEENSEAEPEHEEQEPNE 749
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 290 bits (741), Expect = 4e-76
Identities = 148/208 (71%), Positives = 160/208 (76%), Gaps = 2/208 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEYT EF AFCKQEGI RQFTVAYTPQQNGVAERMNRTL +R RAMLRTAGL
Sbjct: 547 LRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLP 606
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
FWAEA +TACY++NR+PS+AI KT MEMWTGK ADYS LH FGCP YVMYN QERTK
Sbjct: 607 NSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPMYVMYNAQERTK 666
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKK-NDSTVETTMFKV 136
LD KSR+CIFLGYADGVKGYRLWDPTA K+VISRDVIF E + Q+K +D TV+ V
Sbjct: 667 LDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGTVKEKSETV 726
Query: 135 G-XXXXXXXXXXXXEAIPEHEEQEPDES 55
EA PEHEEQEP ES
Sbjct: 727 PVYVENNPENSDSSEAAPEHEEQEPVES 754
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 289 bits (740), Expect = 5e-76
Identities = 148/210 (70%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Frame = -3
Query: 669 RIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLDK 490
R DNGGEYTS EFD FCK+EGI RQFTVAYTPQQNGVAERMNRTLL+RTRAMLR AGL+K
Sbjct: 538 RTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEK 597
Query: 489 PFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTKL 310
FWAEAV TACY++NRAPS+AIE KTPMEMWTGK DYS LHIFG Y MYN QE TKL
Sbjct: 598 SFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITKL 657
Query: 309 DPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKKNDSTV-----ETTM 145
DPKSRKC FLGYADGVKGYRLWDPTA KVVISRDVIF E + Q+ + D + ETT
Sbjct: 658 DPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDSTEKEKPETTQ 717
Query: 144 FKVGXXXXXXXXXXXXEAIPEHEEQEPDES 55
+V EA P HEE EP+ S
Sbjct: 718 IQV----EEEFEQDSSEAEPAHEEPEPESS 743
>gb|ADG59810.1| gag-pol polyprotein [Fraxinus excelsior]
Length = 188
Score = 248 bits (633), Expect = 1e-63
Identities = 116/147 (78%), Positives = 128/147 (87%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DN GEYT EFD+FC+QEGI RQ TVAYTPQQNGVAERMNRTLL+RTRAMLRT G+
Sbjct: 42 LRTDNEGEYTGVEFDSFCQQEGIKRQLTVAYTPQQNGVAERMNRTLLERTRAMLRTTGMT 101
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV+TACYVIN++PS+AI+ KTP+EMWTGK +YS LH FG P YVMYN QE +K
Sbjct: 102 KSFWAEAVKTACYVINQSPSTAIDLKTPIEMWTGKPTNYSHLHTFGSPVYVMYNAQETSK 161
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTA 232
LDPKSRKCIFLG ADGVKGYRLWDPTA
Sbjct: 162 LDPKSRKCIFLGCADGVKGYRLWDPTA 188
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 205 bits (522), Expect = 9e-51
Identities = 108/205 (52%), Positives = 137/205 (66%), Gaps = 2/205 (0%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ +EFD FCK EGI R TV TPQQNGVAERMN+TLL+R R ML AGLD
Sbjct: 536 LRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLD 595
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
+ FWAEAV TACY+INR P + I+ KTPMEMW+GK ADYS L FGC AY Y+ E K
Sbjct: 596 RRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAY--YHVSE-GK 652
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKK--KNDSTVETTMFK 139
L+P+++K +F+GY DGVKG+R+W P ++V++SR+V+F E+ + K +T ET
Sbjct: 653 LEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLD 712
Query: 138 VGXXXXXXXXXXXXEAIPEHEEQEP 64
+ PE E+QEP
Sbjct: 713 KQVEFQVIQNESDLKE-PEEEDQEP 736
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 201 bits (512), Expect = 1e-49
Identities = 96/172 (55%), Positives = 124/172 (72%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ S +F ++C+ EGI R +TV++TPQQNGV ERMNRT++ + R ML AGL
Sbjct: 497 LRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLP 556
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
+ FWAEA TACY+INR+PS AI+ KTP+EMW+G A+YS L +FGC AY + K
Sbjct: 557 RRFWAEAASTACYLINRSPSYAIDKKTPIEMWSGSPANYSDLKVFGCTAYAHV---DNGK 613
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKKNDSTV 157
L+P++ KCIFLGY GVK Y+LW P +KVVISR+VIF ET K+ + V
Sbjct: 614 LEPRAIKCIFLGYPSGVKAYKLWCPETQKVVISRNVIFNETVMLNDKSSTNV 665
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 201 bits (512), Expect = 1e-49
Identities = 97/172 (56%), Positives = 124/172 (72%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R +L AGL
Sbjct: 765 LRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLP 824
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+PS AI+ KTP+E+W+G A+YS L +FGC AY + K
Sbjct: 825 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHV---DNGK 881
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKKNDSTV 157
L+P++ KCIFLGY GVKGY+LW P +KVVISR+V+F E+ K + V
Sbjct: 882 LEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNV 933
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 201 bits (512), Expect = 1e-49
Identities = 97/172 (56%), Positives = 124/172 (72%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R +L AGL
Sbjct: 558 LRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLP 617
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+PS AI+ KTP+E+W+G A+YS L +FGC AY + K
Sbjct: 618 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHV---DNGK 674
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKKNDSTV 157
L+P++ KCIFLGY GVKGY+LW P +KVVISR+V+F E+ K + V
Sbjct: 675 LEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNV 726
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 200 bits (509), Expect = 3e-49
Identities = 96/172 (55%), Positives = 125/172 (72%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG ++ S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R ML AGL
Sbjct: 519 LRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 578
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+PS AI+ KTP+++W+G A+YS L +FGC AY + +K
Sbjct: 579 KQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHV---DNSK 635
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKSQKKKNDSTV 157
L+P++ KCIFLGY GVKGY+LW P +KVVISR+V+F E+ K + V
Sbjct: 636 LEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNV 687
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 197 bits (502), Expect = 2e-48
Identities = 94/161 (58%), Positives = 119/161 (73%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R ML AGL
Sbjct: 375 LRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 434
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+P AI+ KTP+++W+G A+YS L +FGC AY + K
Sbjct: 435 KQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHV---DNGK 491
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAET 190
L+P++ KCIFLGY GVKGY+LW P +KVVISR V+F E+
Sbjct: 492 LEPRTIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFHES 532
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 197 bits (502), Expect = 2e-48
Identities = 94/161 (58%), Positives = 119/161 (73%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R ML AGL
Sbjct: 543 LRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLP 602
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+P AI+ KTP+++W+G A+YS L +FGC AY + K
Sbjct: 603 KQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHV---DNGK 659
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAET 190
L+P++ KCIFLGY GVKGY+LW P +KVVISR V+F E+
Sbjct: 660 LEPRTIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFHES 700
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 197 bits (501), Expect = 3e-48
Identities = 95/161 (59%), Positives = 118/161 (73%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E S F ++CK EGI R +TV +TPQQNGVAERMNRT++ + R ML A L
Sbjct: 467 LRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLP 526
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEAV TACY+INR+PS AI+ KTP+E+W+G A+YS L +FGC AY + K
Sbjct: 527 KQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHV---DNGK 583
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAET 190
L+P+ KCIFLGY GVKGY+LW P +KVVISR+V+F E+
Sbjct: 584 LEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHES 624
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 197 bits (500), Expect = 3e-48
Identities = 94/163 (57%), Positives = 115/163 (70%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEY +F CK EGI R FTV +PQQNGVAERMNRTL+++ R+M AGL
Sbjct: 519 LRSDNGGEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLP 578
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
+ FWAEA ACY+INR+PS AI K E+W+GK DYS L +FGC AY ERTK
Sbjct: 579 EEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCSAYAHIPKDERTK 638
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETKS 184
L+PKS +C+F+G+ GVKGY+LWD K VISRDV+F E ++
Sbjct: 639 LEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISRDVVFDEREA 681
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 197 bits (500), Expect = 3e-48
Identities = 107/224 (47%), Positives = 143/224 (63%), Gaps = 5/224 (2%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNG E+ SN+F++ C++EGI R TV YTPQQNG+AERMNRT+L+R R ML ++GL
Sbjct: 516 LRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLS 575
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FWAEA TA ++INR+PSSA++ KTP E WTGK ADY L +FGC AYV + K
Sbjct: 576 KVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYV---HTKTDK 632
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPT--ARKVVISRDVIFAE---TKSQKKKNDSTVETT 148
L+P++ KCIFLGY GVKGY+LW T K +ISRDV F E +K K+ ++
Sbjct: 633 LEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQTPAKDVEGLDQL 692
Query: 147 MFKVGXXXXXXXXXXXXEAIPEHEEQEPDESAKKQEPGESGEEQ 16
F+V EHE +P++S K+ ++ +E+
Sbjct: 693 QFEV-----------------EHETLQPEKS--KETSSKTAQEE 717
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 197 bits (500), Expect = 3e-48
Identities = 103/231 (44%), Positives = 137/231 (59%), Gaps = 8/231 (3%)
Frame = -3
Query: 672 LRIDNGGEYTSNEFDAFCKQEGINRQFTVAYTPQQNGVAERMNRTLLDRTRAMLRTAGLD 493
LR DNGGEYTS EF+ +C GI + TV TPQ NGVAERMNRT++++ R+MLR A L
Sbjct: 548 LRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 607
Query: 492 KPFWAEAVRTACYVINRAPSSAIETKTPMEMWTGKTADYSRLHIFGCPAYVMYNPQERTK 313
K FW EAVRTACY+INR+PS +E P +WT K YS L +FGC A+ ++RTK
Sbjct: 608 KTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTK 667
Query: 312 LDPKSRKCIFLGYADGVKGYRLWDPTARKVVISRDVIFAETK-------SQKKKNDSTVE 154
LD KS CIF+GY D GYRLWD +KV+ SRDVIF E++ S+K K + +
Sbjct: 668 LDDKSVPCIFIGYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKNGII 727
Query: 153 TTMFKVGXXXXXXXXXXXXEAIPEHEEQEPDESAKKQEP-GESGEEQHSDE 4
+ + +E++PDE ++ E G++ E+ E
Sbjct: 728 PNLVTIPSSSNHPTSAESTIDEVVEQEEQPDEIVEQGEQLGDNTEQMEYPE 778