BLASTX nr result

ID: Cocculus23_contig00018676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00018676
         (373 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006646290.1| PREDICTED: protein sym-1-like [Oryza brachya...    55   8e-06
ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [S...    55   8e-06
ref|NP_001152597.1| peroxisomal membrane protein 2 [Zea mays] gi...    55   8e-06

>ref|XP_006646290.1| PREDICTED: protein sym-1-like [Oryza brachyantha]
          Length = 219

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 326 VIPLQARVAFMSTCSIFWNFYLSSTMSK 243
           ++PL ARVAFMS+CSIFWNFYLSSTMSK
Sbjct: 192 MVPLSARVAFMSSCSIFWNFYLSSTMSK 219


>ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [Sorghum bicolor]
           gi|241928272|gb|EES01417.1| hypothetical protein
           SORBIDRAFT_03g033650 [Sorghum bicolor]
          Length = 241

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 326 VIPLQARVAFMSTCSIFWNFYLSSTMSK 243
           VIPL ARVAFMS+CSIFWNFYLS+TMSK
Sbjct: 214 VIPLPARVAFMSSCSIFWNFYLSTTMSK 241


>ref|NP_001152597.1| peroxisomal membrane protein 2 [Zea mays]
           gi|195657919|gb|ACG48427.1| peroxisomal membrane protein
           2 [Zea mays]
          Length = 240

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 326 VIPLQARVAFMSTCSIFWNFYLSSTMSK 243
           VIPL ARVAFMS+CSIFWNFYLS+TMSK
Sbjct: 213 VIPLPARVAFMSSCSIFWNFYLSTTMSK 240


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